BQ623171

Overview
NameBQ623171
Unique NameBQ623171
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length450
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9730 contig Csv1_Contig9730:425..873. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 1.682e-65
Identity = 120/145 (82.76%), Postives = 126/145 (86.90%), Query Frame = 2 
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VT GLFLARKVSL+R V Y+VAQCLGAICG G VKAF    Y   GGGAN +A GYNKG+ LGAEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAA IYNN+KAWDD WI W G
Sbjct:  110 VTVGLFLARKVSLVRTVLYIVAQCLGAICGCGFVKAFQSSYYTRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVG 254
[Close]
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 1.682e-65
Identity = 121/145 (83.45%), Postives = 126/145 (86.90%), Query Frame = 2 
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VTFGLFLARKVSLIRAV YMVAQCLGAICGVG VKAF    Y + GGGAN +A GYN G+ L AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAA I+N  K WDDHWI W G
Sbjct:  108 VTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSSHYVNYGGGANFLADGYNTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNKSKPWDDHWIFWVG 252
[Close]
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 6.391e-65
Identity = 119/145 (82.07%), Postives = 126/145 (86.90%), Query Frame = 2 
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VTFGLFLARK+SL RAV Y+V QCLGAICG G+VK F  + Y +LGGGANTVA GY KGS LGAEIIGTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA IYN D AWDDHWI W G
Sbjct:  117 VTFGLFLARKLSLTRAVFYIVMQCLGAICGAGVVKGFQPNPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVG 261
[Close]
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 8.347e-65
Identity = 118/145 (81.38%), Postives = 126/145 (86.90%), Query Frame = 2 
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VTFGLFLA KVSL+RAV+YMVAQCLGA CGVGLVK F    YN  GGGAN ++ GYN G  +GAEIIGTFVLVYTVFSATDPKR+ARDSH+PVLAPLPIGF+VFMVHLATIPITGTGINPARSFGAA IYNN KAWDD WI W G
Sbjct:  109 VTFGLFLASKVSLVRAVSYMVAQCLGATCGVGLVKVFQSTYYNRYGGGANMLSDGYNVGVGVGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFSVFMVHLATIPITGTGINPARSFGAAVIYNNQKAWDDQWIFWVG 253
[Close]
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 1.090e-64
Identity = 118/145 (81.38%), Postives = 126/145 (86.90%), Query Frame = 2 
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VTFGLFLARKVSLIRAV Y++AQCLGAICGVGLVK F    Y   GGGAN ++ GY+KG+ LGAEIIGTFVLVYTVFSATDPKR+ARDSH+PVLAPLPIGFAVFMVHLATIPITGTGINPARS G A IYN DKAWDD WI W G
Sbjct:  114 VTFGLFLARKVSLIRAVLYIIAQCLGAICGVGLVKGFQSSYYARYGGGANELSDGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGTAVIYNKDKAWDDQWIFWVG 258
[Close]
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 1.424e-64
Identity = 118/145 (81.38%), Postives = 125/145 (86.21%), Query Frame = 2 
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VTFGLFLARK+SL RAV YM+ QCLGAICG G+VK F    Y +LGGGANTVA GY KGS LGAEIIGTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA IYN D +WDDHWI W G
Sbjct:  118 VTFGLFLARKLSLTRAVFYMIMQCLGAICGAGVVKGFQPTPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWIFWVG 262
[Close]
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 3.172e-64
Identity = 118/145 (81.38%), Postives = 126/145 (86.90%), Query Frame = 2 
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VTFGLFLARKVSL+RA+ Y++AQCLGAICGVGLVK F    Y   GGGAN ++ GY+KG+ L AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAA IYN DKAWDD WI W G
Sbjct:  114 VTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVG 258
[Close]
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 3.172e-64
Identity = 118/145 (81.38%), Postives = 126/145 (86.90%), Query Frame = 2 
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VTFGLFLARKVSL+RA+ Y++AQCLGAICGVGLVK F    Y   GGGAN ++ GY+KG+ L AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAA IYN DKAWDD WI W G
Sbjct:  115 VTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVG 259
[Close]
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 3.172e-64
Identity = 118/145 (81.38%), Postives = 125/145 (86.21%), Query Frame = 2 
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VTFGLFLARKVSL RA+ Y++AQCLGAICGVG VKAF    Y   GGGAN++A GY+ G+ L AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAA IYN  K WDDHWI W G
Sbjct:  110 VTFGLFLARKVSLPRALLYIIAQCLGAICGVGFVKAFQSSYYTRYGGGANSLADGYSTGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVG 254
[Close]
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 4.143e-64
Identity = 115/145 (79.31%), Postives = 126/145 (86.90%), Query Frame = 2 
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VTFGLFLARK+SL RAV Y+V QCLGAICG G+VK F   +Y +LGGGANT+A GY KGS LGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA I+N D AWDDHW+ W G
Sbjct:  117 VTFGLFLARKLSLTRAVYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTIAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDNAWDDHWVFWVG 261
The following BLAST results are available for this feature:
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
PIP24_ARATH1.682e-6582.76Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ... [more]
PIP23_ARATH1.682e-6583.45Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]
PIP13_ARATH6.391e-6582.07Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]
PIP26_ARATH8.347e-6581.38Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]
PIP22_ORYSJ1.090e-6481.38Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
PIP14_ARATH1.424e-6481.38Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ... [more]
PIP24_MAIZE3.172e-6481.38Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
PIP23_MAIZE3.172e-6481.38Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP21_ARATH3.172e-6481.38Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1... [more]
PIP12_ARATH4.143e-6479.31Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00262 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00262 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623171 ID=BQ623171; Name=BQ623171; organism=Citrus sinensis; type=EST; length=450bp
TGTGACGTTTGGGCTGTTCTTGGCAAGGAAGGTATCATTGATCAGGGCTG
TGGCTTACATGGTGGCTCAGTGCTTGGGTGCCATTTGCGGTGTTGGTTTG
GTCAAGGCCTTCATGAAGCATGAGTACAACTCACTTGGTGGTGGTGCTAA
CACTGTGGCTTCTGGCTACAACAAAGGATCAGCCTTGGGTGCTGAGATTA
TTGGTACCTTCGTGCTTGTTTACACAGTCTTCTCGGCCACAGACCCCAAG
AGAAGCGCTCGTGACTCTCACGTGCCCGTTTTGGCTCCACTTCCAATTGG
ATTTGCTGTGTTCATGGTTCACTTGGCCACCATCCCCATCACTGGAACGG
GCATAAACCCTGCTAGGAGCTTTGGTGCTGCTGATATCTACAACAATGAC
AAGGCCTGGGATGACCATTGGATCTTATGGGAAGGACTTAAAAGGAACTT
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