BQ623171

Overview
NameBQ623171
Unique NameBQ623171
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length450
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9730 contig Csv1_Contig9730:425..873. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 7.066e-64
Identity = 115/145 (79.31%), Postives = 126/145 (86.90%), Query Frame = 2 
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VTFGLFLARK+SL RA+ Y+V QCLGAICG G+VK F   +Y +LGGGANTVA GY KGS LGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA IYN D +WDDHW+ W G
Sbjct:  117 VTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVG 261
[Close]
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 7.066e-64
Identity = 115/145 (79.31%), Postives = 126/145 (86.90%), Query Frame = 2 
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VTFGLFLARK+SL RA+ Y+V QCLGAICG G+VK F   +Y +LGGGANTVA GY KGS LGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA IYN D +WDDHW+ W G
Sbjct:  117 VTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVG 261
[Close]
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 2.056e-63
Identity = 114/145 (78.62%), Postives = 126/145 (86.90%), Query Frame = 2 
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VTFGLFLARKVSL+RA+ Y+VAQCLGA+CGV LVK F    Y+  GGGAN +A+GY+KG+ L AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIP+TGTGINPARS GAA +YNN KAW D WI W G
Sbjct:  109 VTFGLFLARKVSLVRAILYIVAQCLGAVCGVALVKGFQSSFYDRYGGGANELAAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVG 253
[Close]
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 237.654 bits (605), Expect = 1.740e-62
Identity = 115/145 (79.31%), Postives = 123/145 (84.83%), Query Frame = 2 
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VTFGLFLARK+SL RA+ Y+V QCLGAICG G+VK F    Y + GGGAN VA GY KGS LGAEI+GTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA IYN D AWDDHWI W G
Sbjct:  118 VTFGLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFQPGLYQTNGGGANVVAHGYTKGSGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVG 262
[Close]
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 2.273e-62
Identity = 117/145 (80.69%), Postives = 124/145 (85.52%), Query Frame = 2 
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VTFGLFLARKVSL+RAV Y+VAQ LGAICGVGLVK F    Y   GGGAN ++ GY+KG+ L AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAA IYN  KAW DHWI W G
Sbjct:  115 VTFGLFLARKVSLVRAVLYIVAQSLGAICGVGLVKGFQSAFYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNQHKAWHDHWIFWVG 259
[Close]
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 2.969e-62
Identity = 115/145 (79.31%), Postives = 123/145 (84.83%), Query Frame = 2 
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VTFGLFLARK+SL RAV YMV QCLGAICG G+VK FM   Y  LGGGAN V  GY KG  LGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA IYN++ AW+DHWI W G
Sbjct:  118 VTFGLFLARKLSLTRAVFYMVMQCLGAICGAGVVKGFMVGPYQRLGGGANVVNPGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNDEHAWNDHWIFWVG 262
[Close]
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 236.498 bits (602), Expect = 3.877e-62
Identity = 113/145 (77.93%), Postives = 122/145 (84.14%), Query Frame = 2 
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VTFGLFLARK+SL RA+ YMV QCLGAICG G+VK F K  Y + GGGAN VA GY KG  LGAEI+GTF+LVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA IYN   AWDDHWI W G
Sbjct:  119 VTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQKGLYETTGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRGHAWDDHWIFWVG 263
[Close]
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 5.064e-62
Identity = 115/145 (79.31%), Postives = 124/145 (85.52%), Query Frame = 2 
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VTFGL LARKV+L+RAV YMVAQCLGAICGV LVKAF    +   GGGAN ++ GY+ G+ + AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVF+VHLATIPITGTGINPARS GAA IYN DKAWD HWI W G
Sbjct:  109 VTFGLLLARKVTLVRAVMYMVAQCLGAICGVALVKAFQSAYFTRYGGGANGLSDGYSIGTGVAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSLGAAIIYNKDKAWDHHWIFWVG 253
[Close]
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 1.128e-61
Identity = 113/145 (77.93%), Postives = 123/145 (84.83%), Query Frame = 2 
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VT GLFLARKVSL+RA+ YM AQCLGAICGV LVK F    Y+  GGGAN +A+GY+ G+ L AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS G A +YNN+KAW D WI W G
Sbjct:  112 VTLGLFLARKVSLVRALLYMAAQCLGAICGVALVKGFQSSLYDRYGGGANELAAGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGVAVVYNNNKAWSDQWIFWVG 256
[Close]
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 1.128e-61
Identity = 112/145 (77.24%), Postives = 123/145 (84.83%), Query Frame = 2 
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VTFGLFLARK+SL RA+ Y+V QCLGAICG G+VK F +  Y   GGGAN VASGY KG  LGAEI+GTF+LVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA IYN D AW+DHWI W G
Sbjct:  120 VTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQQGLYMGNGGGANVVASGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWNDHWIFWVG 264
The following BLAST results are available for this feature:
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
PIP11_VICFA7.066e-6479.31Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH7.066e-6479.31Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP25_ORYSJ2.056e-6378.62Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica G... [more]
PIP15_ARATH1.740e-6279.31Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP23_ORYSJ2.273e-6280.69Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
PIP1_SOLLC2.969e-6279.31Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]
PIP12_ORYSJ3.877e-6277.93Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
PIP25_ARATH5.064e-6279.31Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP24_ORYSJ1.128e-6177.93Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica G... [more]
PIP11_ORYSJ1.128e-6177.24Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00262 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00262 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623171 ID=BQ623171; Name=BQ623171; organism=Citrus sinensis; type=EST; length=450bp
TGTGACGTTTGGGCTGTTCTTGGCAAGGAAGGTATCATTGATCAGGGCTG
TGGCTTACATGGTGGCTCAGTGCTTGGGTGCCATTTGCGGTGTTGGTTTG
GTCAAGGCCTTCATGAAGCATGAGTACAACTCACTTGGTGGTGGTGCTAA
CACTGTGGCTTCTGGCTACAACAAAGGATCAGCCTTGGGTGCTGAGATTA
TTGGTACCTTCGTGCTTGTTTACACAGTCTTCTCGGCCACAGACCCCAAG
AGAAGCGCTCGTGACTCTCACGTGCCCGTTTTGGCTCCACTTCCAATTGG
ATTTGCTGTGTTCATGGTTCACTTGGCCACCATCCCCATCACTGGAACGG
GCATAAACCCTGCTAGGAGCTTTGGTGCTGCTGATATCTACAACAATGAC
AAGGCCTGGGATGACCATTGGATCTTATGGGAAGGACTTAAAAGGAACTT
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