BQ623171

Overview
NameBQ623171
Unique NameBQ623171
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length450
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9730 contig Csv1_Contig9730:425..873. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 113.235 bits (282), Expect = 4.951e-25
Identity = 68/146 (46.58%), Postives = 90/146 (61.64%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH-EYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VT GL L+ ++S++RAV Y++AQC+GAI    ++         NSLG   N++A G + G  LG EIIGT  LV  V + TD +R  RD  +   APL IGF+V + HL  I  TG GINPARSFG+A I +N   + DHW+ W G
Sbjct:   81 VTLGLLLSCQISVLRAVMYIIAQCVGAIVATAILSGITSSLPGNSLG--LNSLAPGVDSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGFSVALGHLLAIDYTGCGINPARSFGSAVITHN---FQDHWVFWVG 217          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 112.079 bits (279), Expect = 1.103e-24
Identity = 67/146 (45.89%), Postives = 88/146 (60.27%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH-EYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VT GL L+ ++S++RA+ Y++AQC+GAI    ++         NSLG   N +A G N G  LG EIIGT  LV  V + TD +R  RD  +    PL IGF+V + HL  I  TG GINPARSFG++ I +N   + DHWI W G
Sbjct:   81 VTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSLG--LNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHN---FQDHWIFWVG 217          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 111.694 bits (278), Expect = 1.440e-24
Identity = 67/146 (45.89%), Postives = 88/146 (60.27%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH-EYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VT GL L+ ++S++RA+ Y++AQC+GAI    ++         NSLG   N +A G N G  LG EIIGT  LV  V + TD +R  RD  +    PL IGF+V + HL  I  TG GINPARSFG++ I +N   + DHWI W G
Sbjct:   81 VTLGLLLSCQISILRAIMYIIAQCVGAIVATVILSGITSSLPDNSLG--LNALAPGVNSGQGLGIEIIGTLQLVLCVLATTD-RRRRRD--LGDSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHN---FQDHWIFWVG 218          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 110.538 bits (275), Expect = 3.209e-24
Identity = 68/146 (46.58%), Postives = 87/146 (59.59%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH-EYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VT GL L+ ++S++RAV Y++AQC+GAI    ++         NSLG   N +A G N G  LG EIIGT  LV  V + TD +R  RD  +    PL IG +V + HL  I  TG GINPARSFG++ I +N K   DHWI W G
Sbjct:   81 VTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLPDNSLG--RNELAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSGPLAIGLSVALGHLLAIDYTGCGINPARSFGSSVITHNFK---DHWIFWVG 217          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 109.768 bits (273), Expect = 5.474e-24
Identity = 67/146 (45.89%), Postives = 87/146 (59.59%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEY-NSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VT GL L+ ++S++RAV Y++AQC+GAI    ++         NSLG   N +A G N G  LG EIIGT  LV  V + TD +R  RD  +   APL IG +V + HL  I  TG GINPARSFG+A +  N   + +HWI W G
Sbjct:   79 VTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLVDNSLG--RNDLAHGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVLTRN---FSNHWIFWVG 215          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 7.149e-24
Identity = 67/146 (45.89%), Postives = 87/146 (59.59%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH-EYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VT GL L+ ++S+ RA+ Y++AQC+GAI    ++         NSLG   N +A G N G  LG EIIGT  LV  V + TD +R  RD  +   APL IG +V + HL  I  TG GINPARSFG+A I +N   + +HWI W G
Sbjct:   79 VTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLPGNSLG--RNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVITHN---FSNHWIFWVG 215          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 7.149e-24
Identity = 67/146 (45.89%), Postives = 87/146 (59.59%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH-EYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VT GL L+ ++S+ RA+ Y++AQC+GAI    ++         NSLG   N +A G N G  LG EIIGT  LV  V + TD +R  RD  +   APL IG +V + HL  I  TG GINPARSFG+A I +N   + +HWI W G
Sbjct:   79 VTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSLG--RNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVITHN---FSNHWIFWVG 215          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 108.997 bits (271), Expect = 9.337e-24
Identity = 67/146 (45.89%), Postives = 87/146 (59.59%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEY-NSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VT GL L+ ++S++RAV Y++AQC+GAI    ++         NSLG   N +A G N G  LG EIIGT  LV  V + TD +R  RD  +   APL IG +V + HL  I  TG GINPARSFG+A +  N   + +HWI W G
Sbjct:   79 VTLGLLLSCQISILRAVMYIIAQCVGAIVASAILSGITSSLLENSLG--RNDLARGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVLTRN---FSNHWIFWVG 215          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.300e-22
Identity = 61/146 (41.78%), Postives = 84/146 (57.53%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VT  +   RK+S+ ++V Y+ AQCLGAI G G++  ++    N +GG G  TV      G  L  E+I TF LV+T+F++ D KR+     +     L IGF+V + HL  I  TG  +NPARSFG A I  N   W++HWI W G
Sbjct:  103 VTVAMVCTRKISIAKSVFYITAQCLGAIIGAGIL--YLVTPPNVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVG 239          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 6.691e-22
Identity = 61/146 (41.78%), Postives = 84/146 (57.53%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VT  +   RK+S+ ++V Y+ AQCLGAI G G++  ++    + +GG G  TV      G  L  E+I TF LV+T+F++ D KR+     V     L IGF+V + HL  I  TG  +NPARSFG A I  N   W++HWI W G
Sbjct:  100 VTVAMVCTRKISIAKSVFYITAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSVA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVG 236          
The following BLAST results are available for this feature:
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
AQP1_PIG4.951e-2546.58Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
AQP1_BOVIN1.103e-2445.89Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]
AQP1_SHEEP1.440e-2445.89Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]
AQP1_CANFA3.209e-2446.58Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
AQP1_MOUSE5.474e-2445.89Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
AQP1_PONAB7.149e-2445.89Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]
AQP1_HUMAN7.149e-2445.89Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3[more]
AQP1_RAT9.337e-2445.89Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQP4_NOTAL2.300e-2241.78Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]
AQP4_RAT6.691e-2241.78Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00262 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00262 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623171 ID=BQ623171; Name=BQ623171; organism=Citrus sinensis; type=EST; length=450bp
TGTGACGTTTGGGCTGTTCTTGGCAAGGAAGGTATCATTGATCAGGGCTG
TGGCTTACATGGTGGCTCAGTGCTTGGGTGCCATTTGCGGTGTTGGTTTG
GTCAAGGCCTTCATGAAGCATGAGTACAACTCACTTGGTGGTGGTGCTAA
CACTGTGGCTTCTGGCTACAACAAAGGATCAGCCTTGGGTGCTGAGATTA
TTGGTACCTTCGTGCTTGTTTACACAGTCTTCTCGGCCACAGACCCCAAG
AGAAGCGCTCGTGACTCTCACGTGCCCGTTTTGGCTCCACTTCCAATTGG
ATTTGCTGTGTTCATGGTTCACTTGGCCACCATCCCCATCACTGGAACGG
GCATAAACCCTGCTAGGAGCTTTGGTGCTGCTGATATCTACAACAATGAC
AAGGCCTGGGATGACCATTGGATCTTATGGGAAGGACTTAAAAGGAACTT
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