BQ623171

Overview
NameBQ623171
Unique NameBQ623171
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length450
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9730 contig Csv1_Contig9730:425..873. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 8.739e-22
Identity = 60/146 (41.10%), Postives = 84/146 (57.53%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VT  +   RK+S+ ++V Y+ AQCLGAI G G++  ++    + +GG G  TV      G  L  E+I TF LV+T+F++ D KR+     +     L IGF+V + HL  I  TG  +NPARSFG A I  N   W++HWI W G
Sbjct:  100 VTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVG 236          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 1.141e-21
Identity = 61/146 (41.78%), Postives = 84/146 (57.53%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VT  +   RK+S+ ++V Y++AQCLGAI G G++  ++    + +GG G  TV      G  L  E+I TF LV+T+F++ D KR    + V     L IGF+V + HL  I  TG  +NPARSFG A I  N   W +HWI W G
Sbjct:  100 VTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WANHWIYWVG 236          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 3.321e-21
Identity = 60/146 (41.10%), Postives = 83/146 (56.85%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH-EYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VT G  L+ ++S+++AV Y++AQCLGA+    ++       E NSLG   N ++ G + G  LG EI+ TF LV  V + TD +R      VP    L IG +V + HL  I  TG G+NPARSFG+A +  N   +  HWI W G
Sbjct:   83 VTLGCLLSCQISILKAVMYIIAQCLGAVVATAILSGITSGLENNSLG--LNGLSPGVSAGQGLGVEILVTFQLVLCVVAVTDRRRHDVSGSVP----LAIGLSVALGHLIAIDYTGCGMNPARSFGSAVLTKN---FTYHWIFWVG 219          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 4.337e-21
Identity = 59/146 (40.41%), Postives = 83/146 (56.85%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VT  +   RK+S+ ++V Y+ AQCLGAI G G++  ++    + +GG G   V      G  L  E+I TF LV+T+F++ D KR+     +     L IGF+V + HL  I  TG  +NPARSFG A I  N   W++HWI W G
Sbjct:  100 VTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGIL--YLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVG 236          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: AQP_HAEIX (Aquaporin OS=Haematobia irritans exigua PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 5.664e-21
Identity = 52/145 (35.86%), Postives = 80/145 (55.17%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VT G  +  ++S+I++V Y+  QC+GAI G  ++K  +    + L  G ++ +S    G A+  E + TF+LV  V   +DP R    + +   APL +G ++   HL  I +TG  +NPARSFG A + N    W DHW+ W G
Sbjct:   84 VTVGFLIVGEMSIIKSVLYIAVQCVGAIAGAAVIKVGVSEAVSGLDLGVSSFSSTLTVGQAVLIEALITFILVVVVKGVSDPGR----TDIKGSAPLAVGLSIAAGHLCAIKLTGASMNPARSFGPAVVQN---MWIDHWVYWVG 221          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 7.398e-21
Identity = 59/146 (40.41%), Postives = 84/146 (57.53%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VT  +   R++S+ ++V Y+ AQCLGAI G G++  ++    + +GG G  TV    + G  L  E+I TF LV+T+F++ D KR    + V     L IG +V + HL  I  TG  +NPARSFG A I  N   W++HWI W G
Sbjct:  100 VTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLSAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGISVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVG 236          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 94.3597 bits (233), Expect = 2.380e-19
Identity = 56/146 (38.36%), Postives = 80/146 (54.79%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VT GL +   VS+++   Y+V+QC+GAI G  ++KA    E   +GG G   +A G + G  +  E + TF+LV+ V    D +R+     V   APL IG ++   HLA I  TG  +NPARSFG A +  N   + D W+ W G
Sbjct:   84 VTIGLIVTADVSILKGAFYIVSQCIGAIAGAAVIKAATPSEV--VGGLGVTGIAPGLSTGQGVLIEALITFMLVFVVHGVCDNRRT----DVKGSAPLAIGLSITAGHLAAIKYTGASMNPARSFGPAVVMGN---YTDLWVYWVG 220          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 3.108e-19
Identity = 53/146 (36.30%), Postives = 77/146 (52.74%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VT GL +   +S+++   Y+V+QC+GAI G  L+KA    +   +GG G   +      G  +  E + TF+LV+ V    D +RS     +   APL IG ++   HL+ I  TG  +NPARSFG A +  N   W D W+ W G
Sbjct:   85 VTIGLMITADISILKGAFYIVSQCVGAIAGAALIKAATPSDV--IGGLGVTGIDPRLTAGQGVMIEALITFILVFVVHGVCDNRRS----DIKGSAPLAIGLSITAGHLSAIKYTGASMNPARSFGPAVVMGN---WTDQWVYWVG 221          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 3.436e-18
Identity = 51/145 (35.17%), Postives = 76/145 (52.41%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VT GL +   +S+++A+ Y++ QC+GAI G  ++K     E+        ++A G         E   TFVL+  V S  D +R     ++   AP+ +G A+   HLA I  TG+ +NPARSFG A   N D  W +HW+ W G
Sbjct:   88 VTCGLLVTGHISILKAIFYIIVQCVGAIAGSAILKVITPAEFRGTLC-MTSLAPGVTPPMGFLVEACITFVLILLVQSVCDDRRK----NLGNAAPVAVGLAITCCHLAAIKYTGSSMNPARSFGPA--VNGDDNWANHWVYWAG 225          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 4.488e-18
Identity = 59/149 (39.60%), Postives = 84/149 (56.38%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG---GANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VTFG F+   +SL++AV Y VAQ LG++    L+K        + GG   GA ++++G    +A+  EI+ TF LVYTV+ +A DPK+      + V+AP+ IGF V    LA     G  +NPA SFG A +      WD+HW+ W G
Sbjct:   88 VTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLKI-------ATGGAAVGAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKK----GDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTG---VWDNHWVYWLG 222          
The following BLAST results are available for this feature:
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
AQP4_DIPME8.739e-2241.10Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=... [more]
AQP4_MOUSE1.141e-2141.78Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]
AQPA_RANES3.321e-2141.10Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 S... [more]
AQP4_HUMAN4.337e-2140.41Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2[more]
AQP_HAEIX5.664e-2135.86Aquaporin OS=Haematobia irritans exigua PE=2 SV=1[more]
AQP4_BOVIN7.398e-2140.41Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
AQP_ANOGA2.380e-1938.36Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]
AQP_AEDAE3.108e-1936.30Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
AQP_CICVR3.436e-1835.17Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 ... [more]
TIP12_ORYSJ4.488e-1839.60Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00262 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00262 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623171 ID=BQ623171; Name=BQ623171; organism=Citrus sinensis; type=EST; length=450bp
TGTGACGTTTGGGCTGTTCTTGGCAAGGAAGGTATCATTGATCAGGGCTG
TGGCTTACATGGTGGCTCAGTGCTTGGGTGCCATTTGCGGTGTTGGTTTG
GTCAAGGCCTTCATGAAGCATGAGTACAACTCACTTGGTGGTGGTGCTAA
CACTGTGGCTTCTGGCTACAACAAAGGATCAGCCTTGGGTGCTGAGATTA
TTGGTACCTTCGTGCTTGTTTACACAGTCTTCTCGGCCACAGACCCCAAG
AGAAGCGCTCGTGACTCTCACGTGCCCGTTTTGGCTCCACTTCCAATTGG
ATTTGCTGTGTTCATGGTTCACTTGGCCACCATCCCCATCACTGGAACGG
GCATAAACCCTGCTAGGAGCTTTGGTGCTGCTGATATCTACAACAATGAC
AAGGCCTGGGATGACCATTGGATCTTATGGGAAGGACTTAAAAGGAACTT
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