BQ623171

Overview
NameBQ623171
Unique NameBQ623171
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length450
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.463e-16
Identity = 57/150 (38.00%), Postives = 75/150 (50.00%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGAN----TVASGYNKGSALGAEIIGTFVLVYTVFSAT-DPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VTFG  +  +VSL+RAV Y  AQ LGA+    L++           GGA      +ASG   G A+  E + TF  VY  ++   DPKR     H+  +APL +GF +    LA  P  G G+NPAR FG A +      W  HW+ W G
Sbjct:   97 VTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLRLAT--------GGARPPGFALASGVGDGHAVLLEAVMTFGFVYAYYATVVDPKRG----HLGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALV---GWRWRHHWVYWLG 231          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 2.463e-16
Identity = 52/146 (35.62%), Postives = 80/146 (54.79%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYN-SLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            +T    LA ++SL RA+ Y++AQ LGA+ G G++          +LG  A   + G  +G+ +  E++ T   +  VF++ D +   R    P  A LP+GF++ + HL  IP TG G+NPARSF  A I  N   + +HW+ W G
Sbjct:   71 ITLAFLLASQLSLPRALGYLLAQLLGALAGAGVLYGVTPAAVRGTLGLSALHPSVGPGQGTVV--ELLLTAQFILCVFASFDDRHDGR----PGSAALPVGFSLALGHLFGIPFTGAGMNPARSFAPAVITRN---FTNHWVFWAG 207          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 3.216e-16
Identity = 51/144 (35.42%), Postives = 77/144 (53.47%), Query Frame = 2
Query:    8 FGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            FG F+   ++L+R + Y++AQ LG+I    L+         + G     ++ G   G AL  EI+ TF LVYTV++ A DPK+     ++ ++AP+ IGF V    L     TG  +NPA SFG A +     +W +HW+ W G
Sbjct:   89 FGAFVGGNITLLRGIVYIIAQLLGSIVCSALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKG----NIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVV---SWSWSNHWVYWAG 220          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 7.165e-16
Identity = 55/146 (37.67%), Postives = 74/146 (50.68%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSAT-DPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VTFG  +  +VSL+RAV Y VAQ LGA+    L++         +      +ASG     A+  E + TF L+Y  ++   DPKR     HV  +APL +GF +    LA  P  G G+NPAR FG A +      W  HW+ W G
Sbjct:   92 VTFGALVGGRVSLVRAVLYWVAQLLGAVAATLLLRLAT----GGMRPPGFALASGVGDWHAVLLEAVMTFGLMYAYYATVIDPKRG----HVGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALV---GWRWRHHWVYWLG 226          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 9.358e-16
Identity = 55/149 (36.91%), Postives = 79/149 (53.02%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG---GANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VTFG F+   ++L+RA+ Y +AQ LGA+    L+K        S GG    A +++ G    +A+  EI+ TF LVYTV+ +A DPK+      + ++APL IG  V    L      G  +NPA SFG A +      W +HW+ W G
Sbjct:   88 VTFGAFIGGNITLLRAILYWIAQLLGAVVACLLLKV-------STGGMETAAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKK----GDIGIIAPLAIGLIVGANILVGGAFDGASMNPAVSFGPAVV---SWIWTNHWVYWVG 222          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.222e-15
Identity = 50/145 (34.48%), Postives = 75/145 (51.72%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VTF   +  ++SL+RA+ YMVAQ LGA+ G  ++ +             NT+  G + G A   EI  T   V  +F+  D +R+ R   V     L +GF++ + HL  +  TG G+NPARSF  A +  N   + +HW+ W G
Sbjct:   71 VTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FTNHWVYWVG 207          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.596e-15
Identity = 55/146 (37.67%), Postives = 81/146 (55.48%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VT GL +   ++++  + Y +AQCLG+     L+K       N L    + VA+G +    +  EII TF LVYTV++ A DPK+ +    + V+AP+ IGF V    LA  P +G  +NPARSFG A + + D  +  +WI W G
Sbjct:   86 VTLGLAVGGNITILTGLFYWIAQCLGSTVACLLLKFVT----NGLSVPTHGVAAGMDAIQGVVMEIIITFALVYTVYATAADPKKGS----LGVIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPA-VASGD--FSQNWIYWAG 220          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.085e-15
Identity = 49/145 (33.79%), Postives = 74/145 (51.03%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VTF   +  ++SL+RA+ YM AQ LGA+ G  ++ +             NT+  G + G A   EI  T   V  +F+  D +R+ R   V     L +GF++ + HL  +  TG G+NPARSF  A +  N   + +HW+ W G
Sbjct:   71 VTFAFLVGSQMSLLRAICYMAAQLLGAVAGAAVLYSVTPAAVRG-NLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FTNHWVYWVG 207          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 3.556e-15
Identity = 54/146 (36.99%), Postives = 78/146 (53.42%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VTFGL +  ++++I  V Y +AQ LG+     L    +K+    L    ++VA+G      +  EII TF LVYTV++ A DPK+ +    +  +APL IG  V    LA  P +G  +NPARSFG A    +   +  HW+ W G
Sbjct:   86 VTFGLAVGGQITVITGVFYWIAQLLGSTAACFL----LKYVTGGLAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAGD---FSGHWVYWVG 220          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 3.556e-15
Identity = 49/145 (33.79%), Postives = 75/145 (51.72%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VTF   +  ++SL+RA+ Y+VAQ LGA+ G  ++ +             NT+  G + G A   EI  T   V  +F+  D +R+ R   V     L +GF++ + HL  +  TG G+NPARSF  A +  N   + +HW+ W G
Sbjct:   71 VTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FTNHWVYWVG 207          
The following BLAST results are available for this feature:
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
TIP32_MAIZE2.463e-1638.00Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1[more]
MIP_CHICK2.463e-1635.62Lens fiber major intrinsic protein OS=Gallus gallu... [more]
TIP1_MEDSA3.216e-1635.42Probable aquaporin TIP-type OS=Medicago sativa GN=... [more]
TIP31_MAIZE7.165e-1637.67Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1[more]
TIP13_ARATH9.358e-1636.91Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3... [more]
MIP_BOVIN1.222e-1534.48Lens fiber major intrinsic protein OS=Bos taurus G... [more]
TIP_ANTMA1.596e-1537.67Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]
MIP_RABIT2.085e-1533.79Lens fiber major intrinsic protein OS=Oryctolagus ... [more]
TIP21_ARATH3.556e-1536.99Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
MIP_SHEEP3.556e-1533.79Lens fiber major intrinsic protein OS=Ovis aries G... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00262 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00262 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623171 ID=BQ623171; Name=BQ623171; organism=Citrus sinensis; type=EST; length=450bp
TGTGACGTTTGGGCTGTTCTTGGCAAGGAAGGTATCATTGATCAGGGCTG
TGGCTTACATGGTGGCTCAGTGCTTGGGTGCCATTTGCGGTGTTGGTTTG
GTCAAGGCCTTCATGAAGCATGAGTACAACTCACTTGGTGGTGGTGCTAA
CACTGTGGCTTCTGGCTACAACAAAGGATCAGCCTTGGGTGCTGAGATTA
TTGGTACCTTCGTGCTTGTTTACACAGTCTTCTCGGCCACAGACCCCAAG
AGAAGCGCTCGTGACTCTCACGTGCCCGTTTTGGCTCCACTTCCAATTGG
ATTTGCTGTGTTCATGGTTCACTTGGCCACCATCCCCATCACTGGAACGG
GCATAAACCCTGCTAGGAGCTTTGGTGCTGCTGATATCTACAACAATGAC
AAGGCCTGGGATGACCATTGGATCTTATGGGAAGGACTTAAAAGGAACTT
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