BQ623171

Overview
NameBQ623171
Unique NameBQ623171
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length450
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9730 contig Csv1_Contig9730:425..873. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 3.010e-14
Identity = 53/149 (35.57%), Postives = 73/149 (48.99%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGAN----TVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VTFG+ + R++S  RA  Y  AQ LGA+  V L++           GG      T+    ++  AL  E++ TF LVYTV++    +RS        +APL IG       LA  P  G  +NPAR+FG A +  N   W  HW+ W G
Sbjct:   95 VTFGVLVGRRISFARAALYWAAQLLGAVLAVLLLRL--------ASGGMRPMGFTLGHRIHERHALLLEVVMTFGLVYTVYATAVDRRSGGGD----IAPLAIGLVAGANILAGGPFDGAAMNPARAFGPALVGWN---WRHHWVYWLG 228          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 3.010e-14
Identity = 48/145 (33.10%), Postives = 73/145 (50.34%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VTF   +  ++SL+RA  YM AQ LGA+ G  ++ +             NT+ +G +   A   EI  T   V  +F+  D +R+ R   V     L +GF++ + HL  +  TG G+NPARSF  A +  N   + +HW+ W G
Sbjct:   71 VTFXFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHAGVSVXQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FTNHWVYWVG 207          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: AQP6_HUMAN (Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 3.010e-14
Identity = 50/145 (34.48%), Postives = 72/145 (49.66%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VT    +   +SL RAVAY+ AQ +GA  G  L+   M  +     G  N V +  + G A+  E++ T  LV  VF++TD ++++            IG +V + HL  I  TG  +NPARSFG A I      +  HW+ W G
Sbjct:   85 VTLAFLVGSHISLPRAVAYVAAQLVGATVGAALLYGVMPGDIRETLG-INVVRNSVSTGQAVAVELLLTLQLVLCVFASTDSRQTSGSPATM------IGISVALGHLIGIHFTGCSMNPARSFGPAIIIGK---FTVHWVFWVG 219          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: AQP2_HUMAN (Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.932e-14
Identity = 48/145 (33.10%), Postives = 70/145 (48.28%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VT    +   VS++RA  Y+ AQ LGA+ G  L+      +        N +++    G A+  E+  T  LV  +F++TD +R       P    L IGF+V + HL  I  TG  +NPARS   A +      +DDHW+ W G
Sbjct:   71 VTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRG-DLAVNALSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGEN----PGTPALSIGFSVALGHLLGIHYTGCSMNPARSLAPAVVTGK---FDDHWVFWIG 207          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 5.135e-14
Identity = 48/145 (33.10%), Postives = 71/145 (48.97%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VTF   +  ++SL RA+ Y+ AQ LGA+ G  ++               NT+  G + G A   EI  T   V  +F+  D +R+ R   V     L IGF++ + HL  +  TG  +NPARSF  A +  N   + +HW+ W G
Sbjct:   71 VTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPAAIRG-NLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----SLAIGFSLTLGHLFGLYYTGASMNPARSFAPAVLTRN---FTNHWVYWVG 207          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: AQP2_SHEEP (Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 5.135e-14
Identity = 52/149 (34.90%), Postives = 73/149 (48.99%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYN--SLGG--GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VT    +   VS +RAV Y+ AQ LGA+ G  L+     HE    ++ G    N + +    G A+  E+  T  LV  +F +TD +R  +  H      L IGF+V + HL  I  TG  +NPARS   A +      +DDHW+ W G
Sbjct:   71 VTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALL-----HEITPPAIRGDLAVNALNNNSTAGQAVTVELFLTLQLVLCIFPSTDKRRGKQLGH----PALSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGK---FDDHWVFWIG 207          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 8.759e-14
Identity = 53/146 (36.30%), Postives = 76/146 (52.05%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VT GL +   ++LI    Y +AQCLG+I    L+  F+    N      + V++G      +  EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARSFG A +  +       WI W G
Sbjct:   86 VTLGLAIGGNITLITGFFYWIAQCLGSIVAC-LLLVFVT---NGKSVPTHGVSAGLGAVEGVVMEIVVTFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD---LSQIWIYWVG 220          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 8.759e-14
Identity = 56/146 (38.36%), Postives = 78/146 (53.42%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VTFGL L  +++++  V Y +AQ LGAI G  LV+        + G       SG      +  EII TF LVYTV++ A DPK+ +    +  +AP+ IGF V    L   P +G  +NPARSFG A + + D  + + WI W G
Sbjct:   87 VTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCTGVATPTHG------LSGVGAFEGVVMEIIVTFGLVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILVAGPFSGGSMNPARSFGPA-VASGD--YTNIWIYWVG 219          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 8.759e-14
Identity = 53/146 (36.30%), Postives = 75/146 (51.37%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VT GL +   +++I    Y +AQCLG+I    L+      E     G    VA+G      +  EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARSFG A +  +   +   WI W G
Sbjct:   86 VTLGLAVGGNITVITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHG----VAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD---FSQIWIYWVG 220          
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 8.759e-14
Identity = 47/145 (32.41%), Postives = 72/145 (49.66%), Query Frame = 2
Query:    2 VTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAADIYNNDKAWDDHWILWEG 436
            VTF   +  ++SL+RA  YM AQ LGA+ G  ++ +             NT+    + G A   EI  T   V  +F+  D +R+ +   V     L +GF++ + HL  +  TG G+NPARSF  A +  N   + +HW+ W G
Sbjct:   71 VTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHPAVSVGQATTVEIFLTLQFVLCIFATYDERRNGQLGSV----ALAVGFSLALGHLFGMYYTGAGMNPARSFAPAILTGN---FTNHWVYWVG 207          
The following BLAST results are available for this feature:
BLAST of BQ623171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
TIP32_ORYSJ3.010e-1435.57Probable aquaporin TIP3-2 OS=Oryza sativa subsp. j... [more]
MIP_CAVPO3.010e-1433.10Lens fiber major intrinsic protein OS=Cavia porcel... [more]
AQP6_HUMAN3.010e-1434.48Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2[more]
AQP2_HUMAN3.932e-1433.10Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1[more]
MIP_RANPI5.135e-1433.10Lens fiber major intrinsic protein OS=Rana pipiens... [more]
AQP2_SHEEP5.135e-1434.90Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1[more]
TIP23_ARATH8.759e-1436.30Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3... [more]
TIP22_ORYSJ8.759e-1438.36Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]
TIP22_ARATH8.759e-1436.30Probable aquaporin TIP2-2 OS=Arabidopsis thaliana ... [more]
MIP_HUMAN8.759e-1432.41Lens fiber major intrinsic protein OS=Homo sapiens... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00262 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00262 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623171 ID=BQ623171; Name=BQ623171; organism=Citrus sinensis; type=EST; length=450bp
TGTGACGTTTGGGCTGTTCTTGGCAAGGAAGGTATCATTGATCAGGGCTG
TGGCTTACATGGTGGCTCAGTGCTTGGGTGCCATTTGCGGTGTTGGTTTG
GTCAAGGCCTTCATGAAGCATGAGTACAACTCACTTGGTGGTGGTGCTAA
CACTGTGGCTTCTGGCTACAACAAAGGATCAGCCTTGGGTGCTGAGATTA
TTGGTACCTTCGTGCTTGTTTACACAGTCTTCTCGGCCACAGACCCCAAG
AGAAGCGCTCGTGACTCTCACGTGCCCGTTTTGGCTCCACTTCCAATTGG
ATTTGCTGTGTTCATGGTTCACTTGGCCACCATCCCCATCACTGGAACGG
GCATAAACCCTGCTAGGAGCTTTGGTGCTGCTGATATCTACAACAATGAC
AAGGCCTGGGATGACCATTGGATCTTATGGGAAGGACTTAAAAGGAACTT
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