BQ623178

Overview
NameBQ623178
Unique NameBQ623178
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length613
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10513 contig Csv1_Contig10513:551..1163. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623178 vs. ExPASy Swiss-Prot
Match: CH601_BURXL (60 kDa chaperonin 1 OS=Burkholderia xenovorans (strain LB400) GN=groL1 PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.000e-32
Identity = 76/196 (38.78%), Postives = 118/196 (60.20%), Query Frame = 1
Query:    7 NELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQACLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSD----KLKDRLAKLSGGYAVLK 582
            +EL+ V+GM+ + G  SPYF  + +K+  VL+   VL++D K+SN   +          G+ LL++AEDVE E L  +  +      K   +KA G  + RKA++ED+AILTGGQV+   +G+        +LG  KR+    +N  II G+GE  +I+ R +Q+R+ I+ +TSD    KL++R+AKL+GG AV+K
Sbjct:  185 DELDVVEGMQFDRGYLSPYFINNPDKQVAVLENPFVLLHDKKVSNIRDLLPILEQVAKAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQVIAEETGLTLEKATLAELGQAKRIEVAKENTTIIDGAGEAANIEARVKQVRTQIEEATSDYDREKLQERVAKLAGGVAVIK 380          
BLAST of BQ623178 vs. ExPASy Swiss-Prot
Match: CH601_BURCM (60 kDa chaperonin 1 OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=groL1 PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.000e-32
Identity = 76/196 (38.78%), Postives = 116/196 (59.18%), Query Frame = 1
Query:    7 NELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQACLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSD----KLKDRLAKLSGGYAVLK 582
            +EL+ V+GM+ + G  SPYF  +  K+  VLD   VL++D K+SN   +          G+ LL++AED+E E L  +  +      K   +KA G  + RKA++ED+AILTGGQV+   +G+        +LG  KR+    +N  II G+GE   I+ R +Q+R+ I+ +TSD    KL++R+AKL+GG AV+K
Sbjct:  185 DELDVVEGMQFDRGYLSPYFINNPEKQVAVLDNPFVLLHDKKVSNIRDLLPVLEQVAKAGRPLLIIAEDIEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQVIAEETGLTLEKATLAELGQAKRIEVGKENTTIIDGAGEAASIEARVKQVRAQIEEATSDYDREKLQERVAKLAGGVAVIK 380          
BLAST of BQ623178 vs. ExPASy Swiss-Prot
Match: CH60_TREPS (60 kDa chaperonin OS=Treponema pallidum subsp. pallidum (strain SS14) GN=groL PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.918e-32
Identity = 79/192 (41.15%), Postives = 111/192 (57.81%), Query Frame = 1
Query:   19 FVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQACLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSD----KLKDRLAKLSGGYAVLK 582
            FV+GM+ + G  S YF T +++ E V +   +LIYD  IS    +          G+ LL++AEDVE E L  +  +    T K C +KA G  + RK ++ED+AIL+GGQV++   G+         LG  K V    +N  II GSG+  DI++R EQ++  I+ STSD    KLK+RLAKLSGG AV+K
Sbjct:  188 FVEGMQFDRGYISSYFVTDRDRMETVYENPYILIYDKSISTMKDLLPLLEKIAQTGRPLLIIAEDVEGEALATLVVNSLRGTLKTCAVKAPGFGDRRKEMLEDIAILSGGQVISEDLGLKLESADIALLGQAKSVKVDKENTTIIDGSGKSKDIKDRIEQIKKQIEASTSDYDSEKLKERLAKLSGGVAVIK 379          
BLAST of BQ623178 vs. ExPASy Swiss-Prot
Match: CH60_TREPA (60 kDa chaperonin OS=Treponema pallidum GN=groL PE=1 SV=4)

HSP 1 Score: 137.887 bits (346), Expect = 3.918e-32
Identity = 79/192 (41.15%), Postives = 111/192 (57.81%), Query Frame = 1
Query:   19 FVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQACLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSD----KLKDRLAKLSGGYAVLK 582
            FV+GM+ + G  S YF T +++ E V +   +LIYD  IS    +          G+ LL++AEDVE E L  +  +    T K C +KA G  + RK ++ED+AIL+GGQV++   G+         LG  K V    +N  II GSG+  DI++R EQ++  I+ STSD    KLK+RLAKLSGG AV+K
Sbjct:  188 FVEGMQFDRGYISSYFVTDRDRMETVYENPYILIYDKSISTMKDLLPLLEKIAQTGRPLLIIAEDVEGEALATLVVNSLRGTLKTCAVKAPGFGDRRKEMLEDIAILSGGQVISEDLGLKLESADIALLGQAKSVKVDKENTTIIDGSGKSKDIKDRIEQIKKQIEASTSDYDSEKLKERLAKLSGGVAVIK 379          
BLAST of BQ623178 vs. ExPASy Swiss-Prot
Match: CH60_OLEAN (60 kDa chaperonin OS=Oleispira antarctica GN=groL PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.918e-32
Identity = 76/196 (38.78%), Postives = 117/196 (59.69%), Query Frame = 1
Query:    7 NELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQACLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSD----KLKDRLAKLSGGYAVLK 582
            +EL+ V+GM+ + G  SPYF  ++ K    ++  L+L+ D KI N   +          G+ LL+VAEDVE + L  +  +    T KV  +KA G  + RKA+++DLAILTGGQV++   GM+     P  LG+  +V+   +N VI+ G+G    +  R +Q+R+ I+ STSD    KL++R+AKL+GG AV+K
Sbjct:  185 DELDVVEGMQFDRGYLSPYFINNQEKMTVEMENPLILLVDKKIDNLQELLPILENVAKSGRPLLIVAEDVEGQALATLVVNNLRGTFKVAAVKAPGFGDRRKAMLQDLAILTGGQVISEELGMSLETADPSSLGTASKVVIDKENTVIVDGAGTEASVNTRVDQIRAEIESSTSDYDIEKLQERVAKLAGGVAVIK 380          
BLAST of BQ623178 vs. ExPASy Swiss-Prot
Match: CH60_COXBU (60 kDa chaperonin OS=Coxiella burnetii GN=groL PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.918e-32
Identity = 78/196 (39.80%), Postives = 115/196 (58.67%), Query Frame = 1
Query:    7 NELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQACLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSD----KLKDRLAKLSGGYAVLK 582
            N L  V+GM+ + G  SPYF  ++      L+   +L+ D KISN   +          G+ LLV+AED+E E L  +  +      KV  +KA G  + RKA+++D+A+LTGG+V++   G++        LGS KRV+ T D+  II GSG+  DI+ R EQ+R  I+ S+SD    KL++RLAKL+GG AV+K
Sbjct:  185 NALEVVEGMQFDRGYLSPYFINNQQNMSAELENPFILLVDKKISNIRELIPLLENVAKSGRPLLVIAEDIEGEALATLVVNNIRGVVKVAAVKAPGFGDRRKAMLQDIAVLTGGKVISEEVGLSLEAASLDDLGSAKRVVVTKDDTTIIDGSGDAGDIKNRVEQIRKEIENSSSDYDKEKLQERLAKLAGGVAVIK 380          
BLAST of BQ623178 vs. ExPASy Swiss-Prot
Match: CH60_COXBR (60 kDa chaperonin OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=groL PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.918e-32
Identity = 78/196 (39.80%), Postives = 115/196 (58.67%), Query Frame = 1
Query:    7 NELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQACLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSD----KLKDRLAKLSGGYAVLK 582
            N L  V+GM+ + G  SPYF  ++      L+   +L+ D KISN   +          G+ LLV+AED+E E L  +  +      KV  +KA G  + RKA+++D+A+LTGG+V++   G++        LGS KRV+ T D+  II GSG+  DI+ R EQ+R  I+ S+SD    KL++RLAKL+GG AV+K
Sbjct:  185 NALEVVEGMQFDRGYLSPYFINNQQNMSAELENPFILLVDKKISNIRELIPLLENIAKSGRPLLVIAEDIEGEALATLVVNNIRGVVKVAAVKAPGFGDRRKAMLQDIAVLTGGKVISEEVGLSLEAASLDDLGSAKRVVVTKDDTTIIDGSGDAGDIKNRVEQIRKEIENSSSDYDKEKLQERLAKLAGGVAVIK 380          
BLAST of BQ623178 vs. ExPASy Swiss-Prot
Match: CH60_COXBN (60 kDa chaperonin OS=Coxiella burnetii (strain Dugway 5J108-111) GN=groL PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.918e-32
Identity = 78/196 (39.80%), Postives = 115/196 (58.67%), Query Frame = 1
Query:    7 NELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQACLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSD----KLKDRLAKLSGGYAVLK 582
            N L  V+GM+ + G  SPYF  ++      L+   +L+ D KISN   +          G+ LLV+AED+E E L  +  +      KV  +KA G  + RKA+++D+A+LTGG+V++   G++        LGS KRV+ T D+  II GSG+  DI+ R EQ+R  I+ S+SD    KL++RLAKL+GG AV+K
Sbjct:  185 NALEVVEGMQFDRGYLSPYFINNQQNMSAELENPFILLVDKKISNIRELIPLLENVAKSGRPLLVIAEDIEGEALATLVVNNIRGVVKVAAVKAPGFGDRRKAMLQDIAVLTGGKVISEEVGLSLEAASLDDLGSAKRVVVTKDDTTIIDGSGDAGDIKNRVEQIRKEIENSSSDYDKEKLQERLAKLAGGVAVIK 380          
BLAST of BQ623178 vs. ExPASy Swiss-Prot
Match: CH60_COXB2 (60 kDa chaperonin OS=Coxiella burnetii (strain CbuG_Q212) GN=groL PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.918e-32
Identity = 78/196 (39.80%), Postives = 115/196 (58.67%), Query Frame = 1
Query:    7 NELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQACLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSD----KLKDRLAKLSGGYAVLK 582
            N L  V+GM+ + G  SPYF  ++      L+   +L+ D KISN   +          G+ LLV+AED+E E L  +  +      KV  +KA G  + RKA+++D+A+LTGG+V++   G++        LGS KRV+ T D+  II GSG+  DI+ R EQ+R  I+ S+SD    KL++RLAKL+GG AV+K
Sbjct:  185 NALEVVEGMQFDRGYLSPYFINNQQNMSAELENPFILLVDKKISNIRELIPLLENVAKSGRPLLVIAEDIEGEALATLVVNNIRGVVKVAAVKAPGFGDRRKAMLQDIAVLTGGKVISEEVGLSLEAASLDDLGSAKRVVVTKDDTTIIDGSGDAGDIKNRVEQIRKEIENSSSDYDKEKLQERLAKLAGGVAVIK 380          
BLAST of BQ623178 vs. ExPASy Swiss-Prot
Match: CH60_COXB1 (60 kDa chaperonin OS=Coxiella burnetii (strain CbuK_Q154) GN=groL PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.918e-32
Identity = 78/196 (39.80%), Postives = 115/196 (58.67%), Query Frame = 1
Query:    7 NELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQACLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSD----KLKDRLAKLSGGYAVLK 582
            N L  V+GM+ + G  SPYF  ++      L+   +L+ D KISN   +          G+ LLV+AED+E E L  +  +      KV  +KA G  + RKA+++D+A+LTGG+V++   G++        LGS KRV+ T D+  II GSG+  DI+ R EQ+R  I+ S+SD    KL++RLAKL+GG AV+K
Sbjct:  185 NALEVVEGMQFDRGYLSPYFINNQQNMSAELENPFILLVDKKISNIRELIPLLENVAKSGRPLLVIAEDIEGEALATLVVNNIRGVVKVAAVKAPGFGDRRKAMLQDIAVLTGGKVISEEVGLSLEAASLDDLGSAKRVVVTKDDTTIIDGSGDAGDIKNRVEQIRKEIENSSSDYDKEKLQERLAKLAGGVAVIK 380          
The following BLAST results are available for this feature:
BLAST of BQ623178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH601_BURXL3.000e-3238.7860 kDa chaperonin 1 OS=Burkholderia xenovorans (st... [more]
CH601_BURCM3.000e-3238.7860 kDa chaperonin 1 OS=Burkholderia ambifaria (str... [more]
CH60_TREPS3.918e-3241.1560 kDa chaperonin OS=Treponema pallidum subsp. pal... [more]
CH60_TREPA3.918e-3241.1560 kDa chaperonin OS=Treponema pallidum GN=groL PE... [more]
CH60_OLEAN3.918e-3238.7860 kDa chaperonin OS=Oleispira antarctica GN=groL ... [more]
CH60_COXBU3.918e-3239.8060 kDa chaperonin OS=Coxiella burnetii GN=groL PE=... [more]
CH60_COXBR3.918e-3239.8060 kDa chaperonin OS=Coxiella burnetii (strain RSA... [more]
CH60_COXBN3.918e-3239.8060 kDa chaperonin OS=Coxiella burnetii (strain Dug... [more]
CH60_COXB23.918e-3239.8060 kDa chaperonin OS=Coxiella burnetii (strain Cbu... [more]
CH60_COXB13.918e-3239.8060 kDa chaperonin OS=Coxiella burnetii (strain Cbu... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00269 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00269 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623178 ID=BQ623178; Name=BQ623178; organism=Citrus sinensis; type=EST; length=613bp
GGCTATAATGAATTAAATTTTGTTAAGGGAATGAAACTAGAGTGGGGTCT
TAAATCCCCATACTTCTTCACCCATAAGAATAAAAAAGAATGTGTTTTAG
ATGGTGCATTGGTTTTGATCTATGACACGAAAATTTCAAACTCCAATGTT
ATCAGGCAAGCATGTTTGCCATGTATGATGCAGGGACAAAGCTTATTGGT
TGTTGCTGAAGATGTTGAAAACGAAGTTCTAGGAGATATTGCGACAGACT
TCACCTGTACTACTGAAAAGGTTTGTATCATCAAAGCTGCTGGATTGGCA
GAAGATAGGAAGGCCATCATGGAGGACCTTGCAATTCTCACAGGAGGCCA
GGTTTTAACTGGAGGCTCAGGTATGAACTCTACGTATTTTGTGCCTCTAA
AGCTTGGCTCATGCAAAAGGGTTATAGCAACAATGGATAATGTTGTTATC
ATTGGTGGGTCTGGTGAATTGGTAGACATTCAAGAAAGATGTGAACAGCT
GAGATCTACAATAAAATTGAGCACTTCGGACAAGTTGAAAGATCGCCTTG
CAAAACTTTCTGGTGGATATGCCGTTTTGAAGGGTTGTGGACATGGGTAA
AGCTGAAGTGCGT
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