BQ623178

Overview
NameBQ623178
Unique NameBQ623178
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length613
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623178 vs. ExPASy Swiss-Prot
Match: CH60_CHLP8 (60 kDa chaperonin OS=Chlorobaculum parvum (strain NCIB 8327) GN=groL PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.918e-32
Identity = 81/194 (41.75%), Postives = 109/194 (56.19%), Query Frame = 1
Query:   10 ELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQACLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSD----KLKDRLAKLSGGYAVL 579
            EL  V+GM+ + G  SPYF T+    E  L+ AL+LIYD KISN   +          G+ LL++AED+E E L  I  +    T KV  +KA G  + RKA++ED+AILTGG V++   G          LG   RV    DN  I+ G G+  +I  R  +++  I+ STSD    KL++RLAKLSGG AVL
Sbjct:  186 ELKVVEGMQFDRGYLSPYFVTNPETMEAELEEALILIYDKKISNMKELLPILEKSAQSGRPLLIIAEDIEGEALATIVVNKLRGTLKVAAVKAPGFGDRRKAMLEDIAILTGGTVISEEKGYKLENATMAYLGQASRVNIDKDNTTIVEGKGKQEEITARINEIKGQIEKSTSDYDTEKLQERLAKLSGGVAVL 379          
BLAST of BQ623178 vs. ExPASy Swiss-Prot
Match: CH60_BACHK (60 kDa chaperonin OS=Bacillus thuringiensis subsp. konkukian GN=groL PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.918e-32
Identity = 78/195 (40.00%), Postives = 114/195 (58.46%), Query Frame = 1
Query:   10 ELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQACLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLAKLSGGYAVLK 582
            EL+ V+GM+ + G  SPY  T  +K E VLD   +LI D KISN   I       + QG+ LL++AEDVE E L  +  +    T  V  +KA G  + RKA++ED+AILTGG+V+T   G +        LG   +V+ T +N  ++ G G    I+ R  Q+R+ ++ +TS    +KL++RLAKL+GG AV+K
Sbjct:  184 ELDVVEGMQFDRGYASPYMITDSDKMEAVLDNPYILITDKKISNIQEILPVLEQVVQQGKPLLIIAEDVEGEALATLVVNKLRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGEVITEELGRDLKSATVESLGRAGKVVVTKENTTVVEGVGSTEQIEARIGQIRAQLEETTSEFDREKLQERLAKLAGGVAVIK 378          
BLAST of BQ623178 vs. ExPASy Swiss-Prot
Match: CH60_BACCZ (60 kDa chaperonin OS=Bacillus cereus (strain ZK / E33L) GN=groL PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.918e-32
Identity = 78/195 (40.00%), Postives = 114/195 (58.46%), Query Frame = 1
Query:   10 ELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQACLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLAKLSGGYAVLK 582
            EL+ V+GM+ + G  SPY  T  +K E VLD   +LI D KISN   I       + QG+ LL++AEDVE E L  +  +    T  V  +KA G  + RKA++ED+AILTGG+V+T   G +        LG   +V+ T +N  ++ G G    I+ R  Q+R+ ++ +TS    +KL++RLAKL+GG AV+K
Sbjct:  184 ELDVVEGMQFDRGYASPYMITDSDKMEAVLDNPYILITDKKISNIQEILPVLEQVVQQGKPLLIIAEDVEGEALATLVVNKLRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGEVITEELGRDLKSATVESLGRAGKVVVTKENTTVVEGVGSTEQIEARIGQIRAQLEETTSEFDREKLQERLAKLAGGVAVIK 378          
BLAST of BQ623178 vs. ExPASy Swiss-Prot
Match: CH60_BACCQ (60 kDa chaperonin OS=Bacillus cereus (strain Q1) GN=groL PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.918e-32
Identity = 78/195 (40.00%), Postives = 114/195 (58.46%), Query Frame = 1
Query:   10 ELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQACLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLAKLSGGYAVLK 582
            EL+ V+GM+ + G  SPY  T  +K E VLD   +LI D KISN   I       + QG+ LL++AEDVE E L  +  +    T  V  +KA G  + RKA++ED+AILTGG+V+T   G +        LG   +V+ T +N  ++ G G    I+ R  Q+R+ ++ +TS    +KL++RLAKL+GG AV+K
Sbjct:  184 ELDVVEGMQFDRGYASPYMITDSDKMEAVLDNPYILITDKKISNIQEILPVLEQVVQQGKPLLIIAEDVEGEALATLVVNKLRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGEVITEELGRDLKSATVESLGRAGKVVVTKENTTVVEGVGSTEQIEARIGQIRAQLEETTSEFDREKLQERLAKLAGGVAVIK 378          
BLAST of BQ623178 vs. ExPASy Swiss-Prot
Match: CH60_BACCE (60 kDa chaperonin OS=Bacillus cereus GN=groL PE=1 SV=3)

HSP 1 Score: 137.887 bits (346), Expect = 3.918e-32
Identity = 78/195 (40.00%), Postives = 114/195 (58.46%), Query Frame = 1
Query:   10 ELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQACLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLAKLSGGYAVLK 582
            EL+ V+GM+ + G  SPY  T  +K E VLD   +LI D KISN   I       + QG+ LL++AEDVE E L  +  +    T  V  +KA G  + RKA++ED+AILTGG+V+T   G +        LG   +V+ T +N  ++ G G    I+ R  Q+R+ ++ +TS    +KL++RLAKL+GG AV+K
Sbjct:  184 ELDVVEGMQFDRGYASPYMITDSDKMEAVLDNPYILITDKKISNIQEILPVLEQVVQQGKPLLIIAEDVEGEALATLVVNKLRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGEVITEELGRDLKSATVESLGRAGKVVVTKENTTVVEGIGNTQQIEARIGQIRAQLEETTSEFDREKLQERLAKLAGGVAVIK 378          
BLAST of BQ623178 vs. ExPASy Swiss-Prot
Match: CH60_BACC7 (60 kDa chaperonin OS=Bacillus cereus (strain AH187) GN=groL PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.918e-32
Identity = 78/195 (40.00%), Postives = 114/195 (58.46%), Query Frame = 1
Query:   10 ELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQACLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLAKLSGGYAVLK 582
            EL+ V+GM+ + G  SPY  T  +K E VLD   +LI D KISN   I       + QG+ LL++AEDVE E L  +  +    T  V  +KA G  + RKA++ED+AILTGG+V+T   G +        LG   +V+ T +N  ++ G G    I+ R  Q+R+ ++ +TS    +KL++RLAKL+GG AV+K
Sbjct:  184 ELDVVEGMQFDRGYASPYMITDSDKMEAVLDNPYILITDKKISNIQEILPVLEQVVQQGKPLLIIAEDVEGEALATLVVNKLRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGEVITEELGRDLKSATVESLGRAGKVVVTKENTTVVEGVGSTEQIEARIGQIRAQLEETTSEFDREKLQERLAKLAGGVAVIK 378          
BLAST of BQ623178 vs. ExPASy Swiss-Prot
Match: CH60_BACC4 (60 kDa chaperonin OS=Bacillus cereus (strain B4264) GN=groL PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.918e-32
Identity = 78/195 (40.00%), Postives = 114/195 (58.46%), Query Frame = 1
Query:   10 ELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQACLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLAKLSGGYAVLK 582
            EL+ V+GM+ + G  SPY  T  +K E VLD   +LI D KISN   I       + QG+ LL++AEDVE E L  +  +    T  V  +KA G  + RKA++ED+AILTGG+V+T   G +        LG   +V+ T +N  ++ G G    I+ R  Q+R+ ++ +TS    +KL++RLAKL+GG AV+K
Sbjct:  184 ELDVVEGMQFDRGYASPYMITDSDKMEAVLDNPYILITDKKISNIQEILPVLEQVVQQGKPLLIIAEDVEGEALATLVVNKLRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGEVITEELGRDLKSATVESLGRAGKVVVTKENTTVVEGVGSTEQIEARIGQIRAQLEETTSEFDREKLQERLAKLAGGVAVIK 378          
BLAST of BQ623178 vs. ExPASy Swiss-Prot
Match: CH60_BACC3 (60 kDa chaperonin OS=Bacillus cereus (strain 03BB102) GN=groL PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.918e-32
Identity = 78/195 (40.00%), Postives = 114/195 (58.46%), Query Frame = 1
Query:   10 ELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQACLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLAKLSGGYAVLK 582
            EL+ V+GM+ + G  SPY  T  +K E VLD   +LI D KISN   I       + QG+ LL++AEDVE E L  +  +    T  V  +KA G  + RKA++ED+AILTGG+V+T   G +        LG   +V+ T +N  ++ G G    I+ R  Q+R+ ++ +TS    +KL++RLAKL+GG AV+K
Sbjct:  184 ELDVVEGMQFDRGYASPYMITDSDKMEAVLDNPYILITDKKISNIQEILPVLEQVVQQGKPLLIIAEDVEGEALATLVVNKLRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGEVITEELGRDLKSATVESLGRAGKVVVTKENTTVVEGVGSTEQIEARIGQIRAQLEETTSEFDREKLQERLAKLAGGVAVIK 378          
BLAST of BQ623178 vs. ExPASy Swiss-Prot
Match: CH60_BACC1 (60 kDa chaperonin OS=Bacillus cereus (strain ATCC 10987) GN=groL PE=3 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 3.918e-32
Identity = 78/195 (40.00%), Postives = 114/195 (58.46%), Query Frame = 1
Query:   10 ELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQACLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLAKLSGGYAVLK 582
            EL+ V+GM+ + G  SPY  T  +K E VLD   +LI D KISN   I       + QG+ LL++AEDVE E L  +  +    T  V  +KA G  + RKA++ED+AILTGG+V+T   G +        LG   +V+ T +N  ++ G G    I+ R  Q+R+ ++ +TS    +KL++RLAKL+GG AV+K
Sbjct:  184 ELDVVEGMQFDRGYASPYMITDSDKMEAVLDNPYILITDKKISNIQEILPVLEQVVQQGKPLLIIAEDVEGEALATLVVNKLRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGEVITEELGRDLKSATVESLGRAGKVVVTKENTTVVEGVGSTEQIEARIGQIRAQLEETTSEFDREKLQERLAKLAGGVAVIK 378          
BLAST of BQ623178 vs. ExPASy Swiss-Prot
Match: CH60_BACC0 (60 kDa chaperonin OS=Bacillus cereus (strain AH820) GN=groL PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.918e-32
Identity = 78/195 (40.00%), Postives = 114/195 (58.46%), Query Frame = 1
Query:   10 ELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQACLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLAKLSGGYAVLK 582
            EL+ V+GM+ + G  SPY  T  +K E VLD   +LI D KISN   I       + QG+ LL++AEDVE E L  +  +    T  V  +KA G  + RKA++ED+AILTGG+V+T   G +        LG   +V+ T +N  ++ G G    I+ R  Q+R+ ++ +TS    +KL++RLAKL+GG AV+K
Sbjct:  184 ELDVVEGMQFDRGYASPYMITDSDKMEAVLDNPYILITDKKISNIQEILPVLEQVVQQGKPLLIIAEDVEGEALATLVVNKLRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGEVITEELGRDLKSATVESLGRAGKVVVTKENTTVVEGVGSTEQIEARIGQIRAQLEETTSEFDREKLQERLAKLAGGVAVIK 378          
The following BLAST results are available for this feature:
BLAST of BQ623178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_CHLP83.918e-3241.7560 kDa chaperonin OS=Chlorobaculum parvum (strain ... [more]
CH60_BACHK3.918e-3240.0060 kDa chaperonin OS=Bacillus thuringiensis subsp.... [more]
CH60_BACCZ3.918e-3240.0060 kDa chaperonin OS=Bacillus cereus (strain ZK / ... [more]
CH60_BACCQ3.918e-3240.0060 kDa chaperonin OS=Bacillus cereus (strain Q1) G... [more]
CH60_BACCE3.918e-3240.0060 kDa chaperonin OS=Bacillus cereus GN=groL PE=1 ... [more]
CH60_BACC73.918e-3240.0060 kDa chaperonin OS=Bacillus cereus (strain AH187... [more]
CH60_BACC43.918e-3240.0060 kDa chaperonin OS=Bacillus cereus (strain B4264... [more]
CH60_BACC33.918e-3240.0060 kDa chaperonin OS=Bacillus cereus (strain 03BB1... [more]
CH60_BACC13.918e-3240.0060 kDa chaperonin OS=Bacillus cereus (strain ATCC ... [more]
CH60_BACC03.918e-3240.0060 kDa chaperonin OS=Bacillus cereus (strain AH820... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00269 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00269 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623178 ID=BQ623178; Name=BQ623178; organism=Citrus sinensis; type=EST; length=613bp
GGCTATAATGAATTAAATTTTGTTAAGGGAATGAAACTAGAGTGGGGTCT
TAAATCCCCATACTTCTTCACCCATAAGAATAAAAAAGAATGTGTTTTAG
ATGGTGCATTGGTTTTGATCTATGACACGAAAATTTCAAACTCCAATGTT
ATCAGGCAAGCATGTTTGCCATGTATGATGCAGGGACAAAGCTTATTGGT
TGTTGCTGAAGATGTTGAAAACGAAGTTCTAGGAGATATTGCGACAGACT
TCACCTGTACTACTGAAAAGGTTTGTATCATCAAAGCTGCTGGATTGGCA
GAAGATAGGAAGGCCATCATGGAGGACCTTGCAATTCTCACAGGAGGCCA
GGTTTTAACTGGAGGCTCAGGTATGAACTCTACGTATTTTGTGCCTCTAA
AGCTTGGCTCATGCAAAAGGGTTATAGCAACAATGGATAATGTTGTTATC
ATTGGTGGGTCTGGTGAATTGGTAGACATTCAAGAAAGATGTGAACAGCT
GAGATCTACAATAAAATTGAGCACTTCGGACAAGTTGAAAGATCGCCTTG
CAAAACTTTCTGGTGGATATGCCGTTTTGAAGGGTTGTGGACATGGGTAA
AGCTGAAGTGCGT
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