BQ623182
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623182 vs. ExPASy Swiss-Prot
Match: LH15_EUGGR (Light-harvesting complex I LH35 proteins (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.479e-18 Identity = 62/186 (33.33%), Postives = 91/186 (48.92%), Query Frame = 2 Query: 2 PGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRITNGLDLE----DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 547 P D G+DP ++ P +++ + E+ HAR +ML G I+PE K WF+ G + DG I L F ++A + EY+R G + + D+ +PG FDPL L D + +EIKNGRLAM +LG Q TGE P+ NLA H ++P N+ T ++ Sbjct: 177 PADRGFDPLSVAADPTVYARMRVSEVFHARLSMLAIVGSIVPELLGK--------GAWFEVGNSV-DG-----------IKLGFILMA---IAAPTEYWRGNGGFNWDKGTADRSYPG--FDPLKLTTDYTK------REIKNGRLAMTGLLGLTFQYLATGESPLANLAAHFANPVGANITTTLA 331 HSP 2 Score: 70.0922 bits (170), Expect = 1.069e-11 Identity = 53/168 (31.55%), Postives = 78/168 (46.43%), Query Frame = 2 Query: 44 PDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRITNGLDLE-----DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNL 532 P + + + E+ + R AML G + PE VWF+ N ++++ FA+I+ + +V EY+R G + D+ +PG FDP L + K EIKNGRLAM M G +Q +VT +GPV NL +HL P A N+ Sbjct: 1 PTVYERMRVAEVFNGRLAMLAIVGCVYPELLGN--------GVWFEVW------NKVDFYR--------FALIS-LQVVAPLEYWRGNGGFGWDGEEKYDRSYPG--FDPCNLTTE-----YTKAAEIKNGRLAMIGMFGLEVQNHVTAQGPVANLIEHLRHPLAANI 138
BLAST of BQ623182 vs. ExPASy Swiss-Prot
Match: LH18_EUGGR (Light-harvesting complex I LH38 proteins (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.850e-18 Identity = 60/183 (32.79%), Postives = 87/183 (47.54%), Query Frame = 2 Query: 2 PGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRITNGLDLE----DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 538 P D G+DP L+ PD +++ + E+ H R AML G I+PE K WF+ G + DG L + + + EY+R G + + D+ +PG FDPL L D + A E+KNGRLA+ A+ G Q TGE P+ NL+ HL++P N+ T Sbjct: 205 PADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELLGK--------GAWFEAGDSV-DGLKLGFI--------------TMAIAAPTEYWRGQGGFNWQKGELDRSYPG--FDPLNLTTDYTRAA-----EVKNGRLALTAVAGLTAQYLATGESPLANLSAHLANPIGANITT 357 HSP 2 Score: 78.9518 bits (193), Expect = 2.301e-14 Identity = 58/169 (34.32%), Postives = 81/169 (47.93%), Query Frame = 2 Query: 5 GDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYR-----ITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENL 496 GD G+DP GL+ P F + Q E+ H R +ML G ++PE WF+ + D N FAV+A + +V EY+R + N + D+ +PG FDPL L + K EIKNGRLAM M G +Q++VTG+ P+ NL Sbjct: 390 GDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELLG--------NGAWFQ----IWDKVDFNR----------FAVVA-LQVVAPLEYWRGNGGFLWNDEETVDQSYPG--FDPLNLTTE-----YTKEAEIKNGRLAMNGMFGLEVQSHVTGKSPINNL 528
BLAST of BQ623182 vs. ExPASy Swiss-Prot
Match: FCP_ISOGA (Fucoxanthin-chlorophyll a-c binding protein, chloroplastic OS=Isochrysis galbana GN=FCP PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.381e-11 Identity = 56/171 (32.75%), Postives = 76/171 (44.44%), Query Frame = 2 Query: 17 YDPFGLSKKPDDFSKYQAYEL--IHARWAMLGAAGFIIPEAFNK-FGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRITNGLD------------LEDKLHPGG-PFDPLGLA-KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGE 478 +DP G K D Y+ E H R AML + GF++ E F+ F + GP + IP + I + +G AE +RI G L + PG FDPLGLA DPD+F L++ KE+ +GRLAM A GF Q V+G+ Sbjct: 46 FDPAGFLKGKDKLEVYRLREAETTHGRVAMLASLGFVVQEKFHPLFSGDNGPAI-------------------EQIPQLPYWLWIVMTIGIGRAELFRIQKGWAKVNPETGKADSALREGYEPGDLGFDPLGLAPSDPDEFRLMQEKELSHGRLAMIAAAGFLAQEAVSGD 197 The following BLAST results are available for this feature:
BLAST of BQ623182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623182 ID=BQ623182; Name=BQ623182; organism=Citrus sinensis; type=EST; length=631bpback to top |