BQ623188
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2) HSP 1 Score: 235.728 bits (600), Expect = 6.181e-77 Identity = 111/138 (80.43%), Postives = 118/138 (85.51%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQF 512 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L+KNGVKFGEAVWFKAG+QIF EGGLDYLGNPNL+HAQSILAIWACQVVLMG VEGYR+ AFDPLGLA+DP+ F Sbjct: 68 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDQLYPGGAFDPLGLAEDPEAF 205 HSP 2 Score: 72.4034 bits (176), Expect = 6.181e-77 Identity = 30/33 (90.91%), Postives = 33/33 (100.00%), Query Frame = 2 Query: 2 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYI 100 MRRT+KSAP+SIWYGPDRPKYLGPFSEQTPSY+ Sbjct: 36 MRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYL 68
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 4.681e-75 Identity = 118/142 (83.10%), Postives = 124/142 (87.32%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWACQVVLMG VEGYRI +FDPLGLADDP+ FAELK Sbjct: 66 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELK 207 HSP 2 Score: 45.0542 bits (105), Expect = 4.681e-75 Identity = 22/37 (59.46%), Postives = 26/37 (70.27%), Query Frame = 2 Query: 2 MRRTVK----SAPQSIWYGPDRPKYLGPFSEQTPSYI 100 MR+TV +A S WYGPDR KYLGPFS + PSY+ Sbjct: 30 MRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYL 66 HSP 3 Score: 32.7278 bits (73), Expect = 4.681e-75 Identity = 15/16 (93.75%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKELKNGRLAMF MF Sbjct: 207 KVKELKNGRLAMFSMF 222
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 1.348e-74 Identity = 117/142 (82.39%), Postives = 124/142 (87.32%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRI +FDPLGLADDP+ FAELK Sbjct: 59 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELK 200 HSP 2 Score: 43.8986 bits (102), Expect = 1.348e-74 Identity = 20/35 (57.14%), Postives = 24/35 (68.57%), Query Frame = 2 Query: 2 MRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYI 100 MR+T + S WYGPDR KYLGPFS + PSY+ Sbjct: 25 MRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYL 59 HSP 3 Score: 32.7278 bits (73), Expect = 1.348e-74 Identity = 15/16 (93.75%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKELKNGRLAMF MF Sbjct: 200 KVKELKNGRLAMFSMF 215
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 2.285e-74 Identity = 114/142 (80.28%), Postives = 123/142 (86.62%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRI +FDPLGLA+DP+ FAELK Sbjct: 69 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELK 210 HSP 2 Score: 48.521 bits (114), Expect = 2.285e-74 Identity = 24/35 (68.57%), Postives = 28/35 (80.00%), Query Frame = 2 Query: 2 MRRTV-KSAPQSI-WYGPDRPKYLGPFSEQTPSYI 100 MR+ V KSAP S WYGPDR KYLGPFS ++PSY+ Sbjct: 35 MRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYL 69 HSP 3 Score: 31.9574 bits (71), Expect = 2.285e-74 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKE+KNGRLAMF MF Sbjct: 210 KVKEIKNGRLAMFSMF 225
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 8.565e-74 Identity = 113/142 (79.58%), Postives = 123/142 (86.62%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYR+ +FDPLGLADDP+ FAELK Sbjct: 71 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELK 212 HSP 2 Score: 45.8246 bits (107), Expect = 8.565e-74 Identity = 22/37 (59.46%), Postives = 25/37 (67.57%), Query Frame = 2 Query: 2 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYI 100 MR+TV A S WYGPDR KYLGPFS + PSY+ Sbjct: 35 MRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYL 71 HSP 3 Score: 31.9574 bits (71), Expect = 8.565e-74 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKE+KNGRLAMF MF Sbjct: 212 KVKEIKNGRLAMFSMF 227
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 8.567e-74 Identity = 112/142 (78.87%), Postives = 123/142 (86.62%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQV+LMG VEGYR+ +FDPLGLA+DP+ FAELK Sbjct: 69 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELK 210 HSP 2 Score: 47.3654 bits (111), Expect = 8.567e-74 Identity = 22/35 (62.86%), Postives = 26/35 (74.29%), Query Frame = 2 Query: 2 MRRTVKS--APQSIWYGPDRPKYLGPFSEQTPSYI 100 MR+TV A S WYGPDR KYLGPFS ++PSY+ Sbjct: 35 MRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYL 69 HSP 3 Score: 31.9574 bits (71), Expect = 8.567e-74 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKE+KNGRLAMF MF Sbjct: 210 KVKEIKNGRLAMFSMF 225
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 1.116e-73 Identity = 115/142 (80.99%), Postives = 123/142 (86.62%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRI +FDPLGLADDP+ FAELK Sbjct: 71 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELK 212 HSP 2 Score: 44.669 bits (104), Expect = 1.116e-73 Identity = 21/37 (56.76%), Postives = 25/37 (67.57%), Query Frame = 2 Query: 2 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYI 100 MR+T A S WYGPDR KYLGPFS ++PSY+ Sbjct: 35 MRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYL 71 HSP 3 Score: 31.9574 bits (71), Expect = 1.116e-73 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKE+KNGRLAMF MF Sbjct: 212 KVKEIKNGRLAMFSMF 227
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 1.116e-73 Identity = 114/142 (80.28%), Postives = 123/142 (86.62%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQV+LMG VEGYRI +FDPLGLADDP+ FAELK Sbjct: 71 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELK 212 HSP 2 Score: 45.0542 bits (105), Expect = 1.116e-73 Identity = 20/31 (64.52%), Postives = 26/31 (83.87%), Query Frame = 2 Query: 8 RTVKSAPQSIWYGPDRPKYLGPFSEQTPSYI 100 +TV+S+ S WYGPDR KYLGPFS ++PSY+ Sbjct: 43 KTVQSS--SPWYGPDRVKYLGPFSGESPSYL 71 HSP 3 Score: 31.9574 bits (71), Expect = 1.116e-73 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKE+KNGRLAMF MF Sbjct: 212 KVKEIKNGRLAMFSMF 227
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 1.116e-73 Identity = 116/142 (81.69%), Postives = 123/142 (86.62%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA QV+LMG VEGYRI +FDPLGLADDP+ FAELK Sbjct: 67 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELK 208 HSP 2 Score: 44.669 bits (104), Expect = 1.116e-73 Identity = 21/35 (60.00%), Postives = 25/35 (71.43%), Query Frame = 2 Query: 2 MRRTVKS--APQSIWYGPDRPKYLGPFSEQTPSYI 100 MR+TV + S WYGPDR KYLGPFS + PSY+ Sbjct: 33 MRKTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYL 67 HSP 3 Score: 32.7278 bits (73), Expect = 1.116e-73 Identity = 15/16 (93.75%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKELKNGRLAMF MF Sbjct: 208 KVKELKNGRLAMFSMF 223
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 1.893e-73 Identity = 113/142 (79.58%), Postives = 122/142 (85.92%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+ ++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR+ +FDPLGLADDP+ FAELK Sbjct: 70 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELK 211 HSP 2 Score: 45.8246 bits (107), Expect = 1.893e-73 Identity = 22/37 (59.46%), Postives = 25/37 (67.57%), Query Frame = 2 Query: 2 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYI 100 MR+TV A S WYGPDR KYLGPFS + PSY+ Sbjct: 34 MRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYL 70 HSP 3 Score: 31.9574 bits (71), Expect = 1.893e-73 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKE+KNGRLAMF MF Sbjct: 211 KVKEIKNGRLAMFSMF 226 The following BLAST results are available for this feature:
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623188 ID=BQ623188; Name=BQ623188; organism=Citrus sinensis; type=EST; length=576bpback to top |