BQ623188
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 3.208e-73 Identity = 115/142 (80.99%), Postives = 122/142 (85.92%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLG+P LIHAQSILAIWACQV+LMG +EGYR+ FDPLGLADDPD FAELK Sbjct: 82 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELK 223 HSP 2 Score: 42.743 bits (99), Expect = 3.208e-73 Identity = 17/32 (53.12%), Postives = 24/32 (75.00%), Query Frame = 2 Query: 5 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYI 100 +++V ++ S WYGPDR YLGPFS + PSY+ Sbjct: 51 KKSVAASIDSPWYGPDRVLYLGPFSGEPPSYL 82 HSP 3 Score: 31.9574 bits (71), Expect = 3.208e-73 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKE+KNGRLAMF MF Sbjct: 223 KVKEIKNGRLAMFSMF 238
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 3.210e-73 Identity = 113/142 (79.58%), Postives = 123/142 (86.62%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR+ +FDPLGLA+DP+ FAELK Sbjct: 70 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELK 211 HSP 2 Score: 45.0542 bits (105), Expect = 3.210e-73 Identity = 21/37 (56.76%), Postives = 25/37 (67.57%), Query Frame = 2 Query: 2 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYI 100 MR+T A S WYGPDR KYLGPFS ++PSY+ Sbjct: 34 MRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYL 70 HSP 3 Score: 31.9574 bits (71), Expect = 3.210e-73 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKE+KNGRLAMF MF Sbjct: 211 KVKEIKNGRLAMFSMF 226
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 3.210e-73 Identity = 113/142 (79.58%), Postives = 123/142 (86.62%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR+ +FDPLGLA+DP+ FAELK Sbjct: 71 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELK 212 HSP 2 Score: 45.0542 bits (105), Expect = 3.210e-73 Identity = 21/37 (56.76%), Postives = 25/37 (67.57%), Query Frame = 2 Query: 2 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYI 100 MR+T A S WYGPDR KYLGPFS ++PSY+ Sbjct: 35 MRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYL 71 HSP 3 Score: 31.9574 bits (71), Expect = 3.210e-73 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKE+KNGRLAMF MF Sbjct: 212 KVKEIKNGRLAMFSMF 227
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 3.210e-73 Identity = 113/142 (79.58%), Postives = 123/142 (86.62%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR+ +FDPLGLA+DP+ FAELK Sbjct: 70 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELK 211 HSP 2 Score: 45.0542 bits (105), Expect = 3.210e-73 Identity = 21/37 (56.76%), Postives = 25/37 (67.57%), Query Frame = 2 Query: 2 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYI 100 MR+T A S WYGPDR KYLGPFS ++PSY+ Sbjct: 34 MRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYL 70 HSP 3 Score: 31.9574 bits (71), Expect = 3.210e-73 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKE+KNGRLAMF MF Sbjct: 211 KVKEIKNGRLAMFSMF 226
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 5.442e-73 Identity = 113/142 (79.58%), Postives = 122/142 (85.92%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLG+P LIHAQSILAIWACQV+LMG +EGYR+ FDPLGLADDPD FA++K Sbjct: 82 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFADVK 223 HSP 2 Score: 44.2838 bits (103), Expect = 5.442e-73 Identity = 18/32 (56.25%), Postives = 24/32 (75.00%), Query Frame = 2 Query: 5 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYI 100 R++V ++ S WYGPDR YLGPFS + PSY+ Sbjct: 51 RKSVAASIDSPWYGPDRVMYLGPFSGEPPSYL 82 HSP 3 Score: 31.9574 bits (71), Expect = 5.442e-73 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKE+KNGRLAMF MF Sbjct: 223 KVKEIKNGRLAMFSMF 238
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 5.446e-73 Identity = 113/142 (79.58%), Postives = 123/142 (86.62%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR+ +FDPLGLA+DP+ FAELK Sbjct: 71 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELK 212 HSP 2 Score: 46.2098 bits (108), Expect = 5.446e-73 Identity = 22/37 (59.46%), Postives = 26/37 (70.27%), Query Frame = 2 Query: 2 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYI 100 MR+TV A S WYGPDR KYLGPFS ++PSY+ Sbjct: 35 MRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYL 71 HSP 3 Score: 30.0314 bits (66), Expect = 5.446e-73 Identity = 13/16 (81.25%), Postives = 14/16 (87.50%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVK +KNGRLAMF MF Sbjct: 212 KVKHIKNGRLAMFSMF 227
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 5.446e-73 Identity = 113/142 (79.58%), Postives = 122/142 (85.92%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTA LSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR+ +FDPLGLADDP+ FAELK Sbjct: 71 LTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELK 212 HSP 2 Score: 45.8246 bits (107), Expect = 5.446e-73 Identity = 22/37 (59.46%), Postives = 25/37 (67.57%), Query Frame = 2 Query: 2 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYI 100 MR+TV A S WYGPDR KYLGPFS + PSY+ Sbjct: 35 MRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYL 71 HSP 3 Score: 31.9574 bits (71), Expect = 5.446e-73 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKE+KNGRLAMF MF Sbjct: 212 KVKEIKNGRLAMFSMF 227
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 7.092e-73 Identity = 114/142 (80.28%), Postives = 123/142 (86.62%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWA QV+LMG VEGYRI +FDPLGLADDP+ FAELK Sbjct: 73 LTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELK 214 HSP 2 Score: 43.5134 bits (101), Expect = 7.092e-73 Identity = 17/23 (73.91%), Postives = 20/23 (86.96%), Query Frame = 2 Query: 32 SIWYGPDRPKYLGPFSEQTPSYI 100 S WYGPDR KYLGPFS ++PSY+ Sbjct: 51 SPWYGPDRVKYLGPFSGESPSYL 73 HSP 3 Score: 32.7278 bits (73), Expect = 7.092e-73 Identity = 15/16 (93.75%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKELKNGRLAMF MF Sbjct: 214 KVKELKNGRLAMFSMF 229
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 7.093e-73 Identity = 114/142 (80.28%), Postives = 123/142 (86.62%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWA QV+LMG VEGYRI +FDPLGLADDP+ FAELK Sbjct: 72 LTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELK 213 HSP 2 Score: 43.5134 bits (101), Expect = 7.093e-73 Identity = 17/23 (73.91%), Postives = 20/23 (86.96%), Query Frame = 2 Query: 32 SIWYGPDRPKYLGPFSEQTPSYI 100 S WYGPDR KYLGPFS ++PSY+ Sbjct: 50 SPWYGPDRVKYLGPFSGESPSYL 72 HSP 3 Score: 32.7278 bits (73), Expect = 7.093e-73 Identity = 15/16 (93.75%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKELKNGRLAMF MF Sbjct: 213 KVKELKNGRLAMFSMF 228
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 9.241e-73 Identity = 110/142 (77.46%), Postives = 123/142 (86.62%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSIL+IWA QV+LMG VEGYR+ +FDPLGLA+DP++ AELK Sbjct: 68 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQVILMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLAEDPERSAELK 209 HSP 2 Score: 48.521 bits (114), Expect = 9.241e-73 Identity = 22/34 (64.71%), Postives = 26/34 (76.47%), Query Frame = 2 Query: 2 MRRTVKS-APQSIWYGPDRPKYLGPFSEQTPSYI 100 MR+TVK+ S WYGPDR KYLGPFS + PSY+ Sbjct: 35 MRKTVKAPVSDSPWYGPDRVKYLGPFSGEAPSYL 68 HSP 3 Score: 32.7278 bits (73), Expect = 9.241e-73 Identity = 15/16 (93.75%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKELKNGRLAMF MF Sbjct: 209 KVKELKNGRLAMFSMF 224 The following BLAST results are available for this feature:
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623188 ID=BQ623188; Name=BQ623188; organism=Citrus sinensis; type=EST; length=576bpback to top |