BQ623188
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 1.203e-72 Identity = 110/142 (77.46%), Postives = 121/142 (85.21%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 L GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+ PE+L+K+GVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR+ +FDPLGLADDPD FAELK Sbjct: 72 LNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELK 213 HSP 2 Score: 50.447 bits (119), Expect = 1.203e-72 Identity = 23/36 (63.89%), Postives = 28/36 (77.78%), Query Frame = 2 Query: 2 MRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYID 103 MRRTV + S IWYG DRPK+LGPFS +TPSY++ Sbjct: 38 MRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYLN 73 HSP 3 Score: 31.9574 bits (71), Expect = 1.203e-72 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKE+KNGRLAMF MF Sbjct: 213 KVKEIKNGRLAMFSMF 228
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 1.203e-72 Identity = 111/142 (78.17%), Postives = 121/142 (85.21%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFP DYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+ ++NG+KFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR+ +FDPLGLA+DP+ FAELK Sbjct: 71 LTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLAEDPEAFAELK 212 HSP 2 Score: 46.2098 bits (108), Expect = 1.203e-72 Identity = 22/37 (59.46%), Postives = 25/37 (67.57%), Query Frame = 2 Query: 2 MRRTVKSAP----QSIWYGPDRPKYLGPFSEQTPSYI 100 MR+TV A S WYGPDR KYLGPFS + PSY+ Sbjct: 35 MRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAPSYL 71 HSP 3 Score: 31.9574 bits (71), Expect = 1.203e-72 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKE+KNGRLAMF MF Sbjct: 212 KVKEIKNGRLAMFSMF 227
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 2.040e-72 Identity = 113/142 (79.58%), Postives = 122/142 (85.92%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPE FAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWACQV+LMG VEGYRI +FDPLGLA+DP+ FAELK Sbjct: 78 LTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELK 219 HSP 2 Score: 43.1282 bits (100), Expect = 2.040e-72 Identity = 18/32 (56.25%), Postives = 22/32 (68.75%), Query Frame = 2 Query: 5 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYI 100 ++ SA S WYGPDR YLGPFS + PSY+ Sbjct: 47 KKLTASASTSPWYGPDRVLYLGPFSGEPPSYL 78 HSP 3 Score: 31.9574 bits (71), Expect = 2.040e-72 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKE+KNGRLAMF MF Sbjct: 219 KVKEIKNGRLAMFSMF 234
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.042e-72 Identity = 112/142 (78.87%), Postives = 123/142 (86.62%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 L+GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV PE+L+KNGVKFGEAVWFKAG+QIF+EGGLDYLGNP+L+HAQSILAIWACQV+LMG VEGYR+ +FDPLGLADDP+ FAELK Sbjct: 69 LSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELK 210 HSP 2 Score: 43.1282 bits (100), Expect = 2.042e-72 Identity = 18/28 (64.29%), Postives = 20/28 (71.43%), Query Frame = 2 Query: 17 KSAPQSIWYGPDRPKYLGPFSEQTPSYI 100 K+ SIWYG DRP YLGPFS PSY+ Sbjct: 42 KAPSGSIWYGSDRPLYLGPFSGSPPSYL 69 HSP 3 Score: 32.7278 bits (73), Expect = 2.042e-72 Identity = 15/16 (93.75%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKELKNGRLAMF MF Sbjct: 210 KVKELKNGRLAMFSMF 225
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 5.873e-72 Identity = 111/142 (78.17%), Postives = 122/142 (85.92%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFK G+QIFS+GGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR+ +FDPLGLA+DP+ FAELK Sbjct: 71 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELK 212 HSP 2 Score: 43.5134 bits (101), Expect = 5.873e-72 Identity = 20/37 (54.05%), Postives = 25/37 (67.57%), Query Frame = 2 Query: 2 MRRTVKSAP----QSIWYGPDRPKYLGPFSEQTPSYI 100 MR+T A S WYGP+R KYLGPFS ++PSY+ Sbjct: 35 MRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYL 71 HSP 3 Score: 31.9574 bits (71), Expect = 5.873e-72 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKE+KNGRLAMF MF Sbjct: 212 KVKEIKNGRLAMFSMF 227
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 9.964e-72 Identity = 113/142 (79.58%), Postives = 123/142 (86.62%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWACQVVLMG +EGYR+ FDPLGLADDP+ FA++K Sbjct: 69 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVVDPLYPGGTFDPLGLADDPEAFADVK 210 HSP 2 Score: 38.5058 bits (88), Expect = 9.964e-72 Identity = 19/38 (50.00%), Postives = 22/38 (57.89%), Query Frame = 2 Query: 2 MRRTVKSAPQ-----SIWYGPDRPKYLGPFSEQTPSYI 100 MR+T A S WYGPDR YLGP S + PSY+ Sbjct: 32 MRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYL 69 HSP 3 Score: 32.7278 bits (73), Expect = 9.964e-72 Identity = 15/16 (93.75%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKELKNGRLAMF MF Sbjct: 210 KVKELKNGRLAMFSMF 225
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 2.867e-71 Identity = 111/142 (78.17%), Postives = 120/142 (84.51%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFK G+QIFSEGGL YLGNP+L+HAQSILAIWACQVVLMG VEGYR+ +FDPLGLADD + FAELK Sbjct: 68 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVKFGEAVWFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDAEAFAELK 209 HSP 2 Score: 43.8986 bits (102), Expect = 2.867e-71 Identity = 20/34 (58.82%), Postives = 25/34 (73.53%), Query Frame = 2 Query: 2 MRRTVKSAPQ-SIWYGPDRPKYLGPFSEQTPSYI 100 MR+T + S WYGPDR KYLGPFS ++PSY+ Sbjct: 35 MRKTAATKKVGSPWYGPDRVKYLGPFSGESPSYL 68 HSP 3 Score: 31.9574 bits (71), Expect = 2.867e-71 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKE+KNGRLAMF MF Sbjct: 209 KVKEIKNGRLAMFSMF 224
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 3.733e-71 Identity = 110/142 (77.46%), Postives = 121/142 (85.21%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+ ++NGVKFGEAVW KAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQV+LMG VEGYR+ +FDPLGLA+DP+ FAELK Sbjct: 71 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYRVAGGPLGVVVDPLYPGGSFDPLGLAEDPEAFAELK 212 HSP 2 Score: 44.2838 bits (103), Expect = 3.733e-71 Identity = 21/37 (56.76%), Postives = 24/37 (64.86%), Query Frame = 2 Query: 2 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYI 100 MR+T A S WYGPDR KYLGPFS + PSY+ Sbjct: 35 MRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYL 71 HSP 3 Score: 30.8018 bits (68), Expect = 3.733e-71 Identity = 14/16 (87.50%), Postives = 14/16 (87.50%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKE KNGRLAMF MF Sbjct: 212 KVKETKNGRLAMFSMF 227
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 241.506 bits (615), Expect = 1.399e-70 Identity = 117/142 (82.39%), Postives = 123/142 (86.62%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG VEGYRI AFDPLGLADDP+ FAELK Sbjct: 69 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGAFDPLGLADDPEAFAELK 210 HSP 2 Score: 34.6538 bits (78), Expect = 1.399e-70 Identity = 14/23 (60.87%), Postives = 16/23 (69.57%), Query Frame = 2 Query: 32 SIWYGPDRPKYLGPFSEQTPSYI 100 S WYG DR YLGP S + PSY+ Sbjct: 47 SPWYGADRVLYLGPLSGEPPSYL 69 HSP 3 Score: 31.9574 bits (71), Expect = 1.399e-70 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKE+KNGRLAMF MF Sbjct: 210 KVKEIKNGRLAMFSMF 225
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 1.821e-70 Identity = 108/142 (76.06%), Postives = 119/142 (83.80%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADP TFAKNR+LEVIH RW MLGALGCVFPE+ ++NGVKFGEAVWFKAG+QIF EGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR+ +FDPLGLADDP+ FAEL+ Sbjct: 70 LTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELE 211 HSP 2 Score: 45.8246 bits (107), Expect = 1.821e-70 Identity = 22/37 (59.46%), Postives = 25/37 (67.57%), Query Frame = 2 Query: 2 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYI 100 MR+TV A S WYGPDR KYLGPFS + PSY+ Sbjct: 34 MRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYL 70 HSP 3 Score: 30.4166 bits (67), Expect = 1.821e-70 Identity = 13/16 (81.25%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 +VKE+KNGRLAMF MF Sbjct: 211 EVKEIKNGRLAMFSMF 226 The following BLAST results are available for this feature:
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623188 ID=BQ623188; Name=BQ623188; organism=Citrus sinensis; type=EST; length=576bpback to top |