BQ623197

Overview
NameBQ623197
Unique NameBQ623197
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length635
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6338 contig Csv1_Contig6338:59..693. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623197 vs. ExPASy Swiss-Prot
Match: DNJB4_PONAB (DnaJ homolog subfamily B member 4 OS=Pongo abelii GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.314e-20
Identity = 49/122 (40.16%), Postives = 70/122 (57.38%), Query Frame = 2
Query:    2 FPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 367
            FP E DE P+++  DIVF+++ K+HPKFKR G ++     +SL EALCG    +  LDGR   I     ++VKP   + I   G+P  + P  RG L I F V FP+++S    ++L   LP
Sbjct:  216 FPREGDETPNSIPADIVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRN--IPMSVNDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLP 335          
BLAST of BQ623197 vs. ExPASy Swiss-Prot
Match: DNJB4_HUMAN (DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.314e-20
Identity = 49/122 (40.16%), Postives = 70/122 (57.38%), Query Frame = 2
Query:    2 FPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 367
            FP E DE P+++  DIVF+++ K+HPKFKR G ++     +SL EALCG    +  LDGR   I     ++VKP   + I   G+P  + P  RG L I F V FP+++S    ++L   LP
Sbjct:  216 FPREGDETPNSIPADIVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRN--IPMSVNDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLP 335          
BLAST of BQ623197 vs. ExPASy Swiss-Prot
Match: DNJB4_MOUSE (DnaJ homolog subfamily B member 4 OS=Mus musculus GN=Dnajb4 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.134e-19
Identity = 49/122 (40.16%), Postives = 70/122 (57.38%), Query Frame = 2
Query:    2 FPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 367
            FP E DE P+++  DIVFV++ KEHPKFKR G ++     +SL EALCG    +  +DGR L +     ++VKP   + +   G+P  + P  RG L I F V FP+ +S    ++L   LP
Sbjct:  216 FPREGDETPNSIPADIVFVIKDKEHPKFKRDGSNIVYTAKISLREALCGCSLNVPTMDGRNLPMSVT--DIVKPGMRRRVIGYGLPFPKNPDQRGDLLIEFDVSFPDVISAASKEILRKHLP 335          
BLAST of BQ623197 vs. ExPASy Swiss-Prot
Match: DNJB4_BOVIN (DnaJ homolog subfamily B member 4 OS=Bos taurus GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.134e-19
Identity = 49/122 (40.16%), Postives = 69/122 (56.56%), Query Frame = 2
Query:    2 FPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 367
            FP E DE P ++  DIVFV++ K+HPKFKR G ++     +SL EALCG    +  +DGR   I     ++VKP   + I   G+P  + P  RG L I F V FP+++S    ++L   LP
Sbjct:  216 FPREGDETPTSIPADIVFVIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTMDGR--TIPMTINDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLP 335          
BLAST of BQ623197 vs. ExPASy Swiss-Prot
Match: DNJB5_MOUSE (DnaJ homolog subfamily B member 5 OS=Mus musculus GN=Dnajb5 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.031e-18
Identity = 49/122 (40.16%), Postives = 68/122 (55.74%), Query Frame = 2
Query:    2 FPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 367
            FP E D  PD +  DIVFVL+ K H  F+R G ++     +SL EALCG    I  +DGR  +I     +V+KP   K +  EG+P  + P  RG L + F V FP+ L+P   ++L+  LP
Sbjct:  227 FPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGR--VIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLP 346          
BLAST of BQ623197 vs. ExPASy Swiss-Prot
Match: DNJB5_HUMAN (DnaJ homolog subfamily B member 5 OS=Homo sapiens GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.031e-18
Identity = 49/122 (40.16%), Postives = 68/122 (55.74%), Query Frame = 2
Query:    2 FPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 367
            FP E D  PD +  DIVFVL+ K H  F+R G ++     +SL EALCG    I  +DGR  +I     +V+KP   K +  EG+P  + P  RG L + F V FP+ L+P   ++L+  LP
Sbjct:  227 FPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGR--VIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLP 346          
BLAST of BQ623197 vs. ExPASy Swiss-Prot
Match: DNJB5_BOVIN (DnaJ homolog subfamily B member 5 OS=Bos taurus GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.031e-18
Identity = 49/122 (40.16%), Postives = 68/122 (55.74%), Query Frame = 2
Query:    2 FPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 367
            FP E D  PD +  DIVFVL+ K H  F+R G ++     +SL EALCG    I  +DGR  +I     +V+KP   K +  EG+P  + P  RG L + F V FP+ L+P   ++L+  LP
Sbjct:  227 FPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGR--VIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLP 346          
BLAST of BQ623197 vs. ExPASy Swiss-Prot
Match: DNJA1_DICDI (DnaJ homolog subfamily A member 1 homolog OS=Dictyostelium discoideum GN=dnaja1 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.720e-17
Identity = 44/144 (30.56%), Postives = 79/144 (54.86%), Query Frame = 2
Query:    8 GEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVN 439
            G+  E P    GD++  +++K +  FKR GD+L     L L +++ G QF+I  LD R+L +  + G+++K    + I +EGMP+ +    +GKL I F +++P +L+ D  + L  +LP   +  ++     +C+   L  VN
Sbjct:  264 GQGSEYPGVPPGDVIITIREKPNVNFKRNGDNLIYTKRLKLLDSIAGSQFIINTLDQRKLWVNHEKGDIIKQGDMRYIENEGMPI-KGTSRKGKLIIAFDIEYPSNLTNDDIEKLSKILPKAATPSVSK---SDCKSVGLSKVN 403          
BLAST of BQ623197 vs. ExPASy Swiss-Prot
Match: DNAJ1_DROME (DnaJ protein homolog 1 OS=Drosophila melanogaster GN=DnaJ-1 PE=1 SV=3)

HSP 1 Score: 88.9669 bits (219), Expect = 2.246e-17
Identity = 45/122 (36.89%), Postives = 68/122 (55.74%), Query Frame = 2
Query:    2 FPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 367
            FP E D AP+    DIVF+++ K H  FKR+G DL     +SL +ALCG    +  L G ++ +     E++KP   + IN  G+P+ + P  RG L + F + FP++L+P     L  +LP
Sbjct:  213 FPQEGDSAPNKTPADIVFIIRDKPHSLFKREGIDLKYTAQISLKQALCGALVSVPTLQGSRIQVNPN-HEIIKPTTTRRINGLGLPVPKEPSRRGDLIVSFDIKFPDTLAPSLQNQLSELLP 333          
BLAST of BQ623197 vs. ExPASy Swiss-Prot
Match: DNJB1_MOUSE (DnaJ homolog subfamily B member 1 OS=Mus musculus GN=Dnajb1 PE=2 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 2.933e-17
Identity = 48/122 (39.34%), Postives = 68/122 (55.74%), Query Frame = 2
Query:    2 FPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 367
            FP E D+  + +  DIVFVL+ K H  FKR G D+     +SL EALCG    +  LDGR + +  +  +V++P   + +  EG+P+ + P  RG L I F V FPE +      +LE VLP
Sbjct:  220 FPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFK--DVIRPGMRRKVPGEGLPLPKTPEKRGDLVIEFEVIFPERIPVSSRTILEQVLP 339          
The following BLAST results are available for this feature:
BLAST of BQ623197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
DNJB4_PONAB6.314e-2040.16DnaJ homolog subfamily B member 4 OS=Pongo abelii ... [more]
DNJB4_HUMAN6.314e-2040.16DnaJ homolog subfamily B member 4 OS=Homo sapiens ... [more]
DNJB4_MOUSE3.134e-1940.16DnaJ homolog subfamily B member 4 OS=Mus musculus ... [more]
DNJB4_BOVIN3.134e-1940.16DnaJ homolog subfamily B member 4 OS=Bos taurus GN... [more]
DNJB5_MOUSE2.031e-1840.16DnaJ homolog subfamily B member 5 OS=Mus musculus ... [more]
DNJB5_HUMAN2.031e-1840.16DnaJ homolog subfamily B member 5 OS=Homo sapiens ... [more]
DNJB5_BOVIN2.031e-1840.16DnaJ homolog subfamily B member 5 OS=Bos taurus GN... [more]
DNJA1_DICDI1.720e-1730.56DnaJ homolog subfamily A member 1 homolog OS=Dicty... [more]
DNAJ1_DROME2.246e-1736.89DnaJ protein homolog 1 OS=Drosophila melanogaster ... [more]
DNJB1_MOUSE2.933e-1739.34DnaJ homolog subfamily B member 1 OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00288 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00288 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623197 ID=BQ623197; Name=BQ623197; organism=Citrus sinensis; type=EST; length=635bp
GTTCCCTGGAGAAGCTGATGAAGCGCCCGACACTGTCACAGGTGACATTG
TATTTGTTCTACAACAGAAAGAGCACCCGAAATTTAAGCGAAAGGGTGAT
GACCTATTTGTTGAGCACACCCTGTCACTGACAGAAGCTCTCTGTGGCTT
TCAATTTGTAATAACTCATTTGGATGGCCGGCAACTCCTCATCAAATCCC
AGCCTGGGGAAGTAGTCAAGCCGGACCAATTCAAGGCCATAAATGATGAA
GGAATGCCTATGTATCAGAGGCCATTTATGAGGGGCAAACTGTACATTCA
TTTCAGTGTTGACTTCCCTGAGTCACTGAGCCCAGACCAGTGCAAGATGC
TGGAGACCGTACTACCTCCAAGGACCTCAGTCCAGCTCACCGATATGGAA
CTGGATGAGTGTGAAGAAACAACCCTGCATGATGTGAACATTGAGGAGGA
AATGCGAAGGAAGCAACAAGCAGCTCAGGAGGCATACGATGAAGATGACG
ATATGCAAGGTGGTGCCCAGAGAGTGCAGTGTGCTCAGCAGTGATGATGT
AGAAGAAAAGGGGTGGCCTGATTTAGTATTTTCATTGTTTGGGAGAAAAA
GATTCTCAACATATTTATTTTCTGGTATAGGCTTT
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