BQ623197

Overview
NameBQ623197
Unique NameBQ623197
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length635
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6338 contig Csv1_Contig6338:59..693. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623197 vs. ExPASy Swiss-Prot
Match: SIS1_YEAST (Protein SIS1 OS=Saccharomyces cerevisiae GN=SIS1 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.831e-14
Identity = 43/102 (42.16%), Postives = 58/102 (56.86%), Query Frame = 2
Query:   53 FVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQL-LIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLE 355
            FV+Q+K HP FKR GDDL     LS  E+L GF   I  +DGR L L + QP   V+P Q      +GMP  + P  RG L + + VD+P SL+  Q + ++
Sbjct:  251 FVIQEKSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQP---VQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAID 349          
BLAST of BQ623197 vs. ExPASy Swiss-Prot
Match: DJB11_RAT (DnaJ homolog subfamily B member 11 OS=Rattus norvegicus GN=Dnajb11 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.153e-13
Identity = 42/115 (36.52%), Postives = 64/115 (55.65%), Query Frame = 2
Query:    2 FPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCK 346
            F GE +   D   GD+ F ++  +H  F+R+GDDL+   T+SL EAL GF+  ITHLDG ++ I     ++ +P        EG+P +    ++G L I F VDFP+    ++ K
Sbjct:  224 FIGEGEPHVDGEPGDLRFRIKVVKHRIFERRGDDLYTNVTVSLVEALVGFEMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAK 336          
BLAST of BQ623197 vs. ExPASy Swiss-Prot
Match: DJB11_MOUSE (DnaJ homolog subfamily B member 11 OS=Mus musculus GN=Dnajb11 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.153e-13
Identity = 42/115 (36.52%), Postives = 64/115 (55.65%), Query Frame = 2
Query:    2 FPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCK 346
            F GE +   D   GD+ F ++  +H  F+R+GDDL+   T+SL EAL GF+  ITHLDG ++ I     ++ +P        EG+P +    ++G L I F VDFP+    ++ K
Sbjct:  224 FIGEGEPHVDGEPGDLRFRIKVVKHRIFERRGDDLYTNVTVSLVEALVGFEMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAK 336          
BLAST of BQ623197 vs. ExPASy Swiss-Prot
Match: DJB11_BOVIN (DnaJ homolog subfamily B member 11 OS=Bos taurus GN=DNAJB11 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.383e-13
Identity = 44/122 (36.07%), Postives = 68/122 (55.74%), Query Frame = 2
Query:    2 FPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFP-ESLSPDQCKMLETVL 364
            F GE +   D   GD+ F ++  +H  F+R+GDDL+   T+SL E+L GF   ITHLDG ++ I     ++ +P        EG+P +    ++G L I F VDFP E LS +  + ++ +L
Sbjct:  224 FIGEGEPHVDGEPGDLRFRIKVVKHSIFERRGDDLYTNVTISLVESLVGFDMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLSEEAREGIKQLL 343          
BLAST of BQ623197 vs. ExPASy Swiss-Prot
Match: SPJ1_SCHPO (DnaJ-related protein spj1 OS=Schizosaccharomyces pombe GN=spj1 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 6.997e-11
Identity = 47/143 (32.87%), Postives = 72/143 (50.35%), Query Frame = 2
Query:    2 FPGEADEAPDTVTGDIVFVLQQKEHPK-FKRKGDDLFVEHTLSLTEALCG-FQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMY-----QRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDE 409
            F G+ADE P    GDI+ +L+       + RK +DL+ + T+S+ EAL G ++  I  LDG  + +K   GEVV P + + + ++GMP+Y     +     G  YI + V FP+ L     K L  +       +  D E DE
Sbjct:  244 FRGKADEIPGMEAGDIIVILEAAGGDYGWTRKDNDLYRKETISVREALLGNWKRKIQKLDGSFMEVKRSAGEVVHPGETERVKNQGMPIYNLHKGKTTSAHGSAYIEWEVKFPKKLKGKFLKDLNNLF------EKYDNEFDE 380          
BLAST of BQ623197 vs. ExPASy Swiss-Prot
Match: DNJ20_CAEBR (DnaJ homolog dnj-20 OS=Caenorhabditis briggsae GN=dnj-20 PE=4 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.997e-11
Identity = 44/142 (30.99%), Postives = 67/142 (47.18%), Query Frame = 2
Query:    2 FPGEADEAPDTVTGDIVFVLQQKEHPKF---------------------------KRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCK 346
            F GE +   +   GD+ F ++ ++HP+F                           +RKGDDL+   T+SL +AL GF+  I HLDG   ++K Q  +V  P       DEGMP  +    +G L + F V+FP++   D+ K
Sbjct:  223 FHGEGEPHIEGDPGDLKFKIRIQKHPRFLISVTGIEIIELKVDELVELLLEGIRFERKGDDLYTNVTISLQDALNGFEMEILHLDGH--MVKVQRDKVTWPGARLRKKDEGMPSMENNNKKGMLIVTFDVEFPKTELTDEQK 362          
The following BLAST results are available for this feature:
BLAST of BQ623197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
SIS1_YEAST8.831e-1442.16Protein SIS1 OS=Saccharomyces cerevisiae GN=SIS1 P... [more]
DJB11_RAT1.153e-1336.52DnaJ homolog subfamily B member 11 OS=Rattus norve... [more]
DJB11_MOUSE1.153e-1336.52DnaJ homolog subfamily B member 11 OS=Mus musculus... [more]
DJB11_BOVIN4.383e-1336.07DnaJ homolog subfamily B member 11 OS=Bos taurus G... [more]
SPJ1_SCHPO6.997e-1132.87DnaJ-related protein spj1 OS=Schizosaccharomyces p... [more]
DNJ20_CAEBR6.997e-1130.99DnaJ homolog dnj-20 OS=Caenorhabditis briggsae GN=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00288 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00288 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623197 ID=BQ623197; Name=BQ623197; organism=Citrus sinensis; type=EST; length=635bp
GTTCCCTGGAGAAGCTGATGAAGCGCCCGACACTGTCACAGGTGACATTG
TATTTGTTCTACAACAGAAAGAGCACCCGAAATTTAAGCGAAAGGGTGAT
GACCTATTTGTTGAGCACACCCTGTCACTGACAGAAGCTCTCTGTGGCTT
TCAATTTGTAATAACTCATTTGGATGGCCGGCAACTCCTCATCAAATCCC
AGCCTGGGGAAGTAGTCAAGCCGGACCAATTCAAGGCCATAAATGATGAA
GGAATGCCTATGTATCAGAGGCCATTTATGAGGGGCAAACTGTACATTCA
TTTCAGTGTTGACTTCCCTGAGTCACTGAGCCCAGACCAGTGCAAGATGC
TGGAGACCGTACTACCTCCAAGGACCTCAGTCCAGCTCACCGATATGGAA
CTGGATGAGTGTGAAGAAACAACCCTGCATGATGTGAACATTGAGGAGGA
AATGCGAAGGAAGCAACAAGCAGCTCAGGAGGCATACGATGAAGATGACG
ATATGCAAGGTGGTGCCCAGAGAGTGCAGTGTGCTCAGCAGTGATGATGT
AGAAGAAAAGGGGTGGCCTGATTTAGTATTTTCATTGTTTGGGAGAAAAA
GATTCTCAACATATTTATTTTCTGGTATAGGCTTT
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