BQ623198

Overview
NameBQ623198
Unique NameBQ623198
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length603
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2325 contig Csv1_Contig2325:351..952. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of BQ623198 vs. ExPASy Swiss-Prot
Match: EF1A1_MOUSE (Elongation factor 1-alpha 1 OS=Mus musculus GN=Eef1a1 PE=1 SV=3)

HSP 1 Score: 295.434 bits (755), Expect = 1.426e-79
Identity = 144/179 (80.45%), Postives = 159/179 (88.83%), Query Frame = 2 
Query:    2 LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRF 538
            LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTF P  +TTEVKSVEMHHEAL EALPGDNVGFNVKNV+VKD++RG VA +SK+DP  EAA FT+QVII+NHPGQI  GYAPVLDCHT+HIA KF+EL  KIDRRSGK+LE  PKFLK+GDA +V M+P KPM VE+FSDYPPLGRF
Sbjct:  246 LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRF 424
[Close]
BLAST of BQ623198 vs. ExPASy Swiss-Prot
Match: EF1A1_HUMAN (Elongation factor 1-alpha 1 OS=Homo sapiens GN=EEF1A1 PE=1 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 1.426e-79
Identity = 144/179 (80.45%), Postives = 159/179 (88.83%), Query Frame = 2 
Query:    2 LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRF 538
            LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTF P  +TTEVKSVEMHHEAL EALPGDNVGFNVKNV+VKD++RG VA +SK+DP  EAA FT+QVII+NHPGQI  GYAPVLDCHT+HIA KF+EL  KIDRRSGK+LE  PKFLK+GDA +V M+P KPM VE+FSDYPPLGRF
Sbjct:  246 LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRF 424
[Close]
BLAST of BQ623198 vs. ExPASy Swiss-Prot
Match: EF1A1_FELCA (Elongation factor 1-alpha 1 OS=Felis catus GN=EEF1A1 PE=2 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 1.426e-79
Identity = 144/179 (80.45%), Postives = 159/179 (88.83%), Query Frame = 2 
Query:    2 LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRF 538
            LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTF P  +TTEVKSVEMHHEAL EALPGDNVGFNVKNV+VKD++RG VA +SK+DP  EAA FT+QVII+NHPGQI  GYAPVLDCHT+HIA KF+EL  KIDRRSGK+LE  PKFLK+GDA +V M+P KPM VE+FSDYPPLGRF
Sbjct:  246 LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRF 424
[Close]
BLAST of BQ623198 vs. ExPASy Swiss-Prot
Match: EF1A1_CRIGR (Elongation factor 1-alpha 1 OS=Cricetulus griseus GN=EEF1A1 PE=2 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 1.426e-79
Identity = 144/179 (80.45%), Postives = 159/179 (88.83%), Query Frame = 2 
Query:    2 LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRF 538
            LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTF P  +TTEVKSVEMHHEAL EALPGDNVGFNVKNV+VKD++RG VA +SK+DP  EAA FT+QVII+NHPGQI  GYAPVLDCHT+HIA KF+EL  KIDRRSGK+LE  PKFLK+GDA +V M+P KPM VE+FSDYPPLGRF
Sbjct:  246 LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRF 424
[Close]
BLAST of BQ623198 vs. ExPASy Swiss-Prot
Match: EF1A1_BOVIN (Elongation factor 1-alpha 1 OS=Bos taurus GN=EEF1A1 PE=2 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 1.426e-79
Identity = 144/179 (80.45%), Postives = 159/179 (88.83%), Query Frame = 2 
Query:    2 LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRF 538
            LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTF P  +TTEVKSVEMHHEAL EALPGDNVGFNVKNV+VKD++RG VA +SK+DP  EAA FT+QVII+NHPGQI  GYAPVLDCHT+HIA KF+EL  KIDRRSGK+LE  PKFLK+GDA +V M+P KPM VE+FSDYPPLGRF
Sbjct:  246 LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRF 424
[Close]
BLAST of BQ623198 vs. ExPASy Swiss-Prot
Match: EF1A0_XENLA (Elongation factor 1-alpha, somatic form OS=Xenopus laevis GN=eef1as PE=2 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 1.426e-79
Identity = 143/179 (79.89%), Postives = 160/179 (89.39%), Query Frame = 2 
Query:    2 LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRF 538
            LRLPLQDVYKIGGIGTVPVGRVETGV+KPGMVVTF P  +TTEVKSVEMHHEAL EA+PGDNVGFNVKNV+VKD++RG VA +SK+DP  EA +FT+QVII+NHPGQIG GYAPVLDCHT+HIA KF+EL  KIDRRSGK+LE  PKFLK+GDA +V MIP KPM VE+FSDYPPLGRF
Sbjct:  246 LRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPVNVTTEVKSVEMHHEALTEAVPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAGSFTAQVIILNHPGQIGAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDNPKFLKSGDAAIVDMIPGKPMCVESFSDYPPLGRF 424
[Close]
BLAST of BQ623198 vs. ExPASy Swiss-Prot
Match: EF1A_PIRIN (Elongation factor 1-alpha OS=Piriformospora indica GN=TEF1 PE=2 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 2.433e-79
Identity = 136/179 (75.98%), Postives = 164/179 (91.62%), Query Frame = 2 
Query:    2 LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRF 538
            LRLPLQDVYKIGGIGTVPVGRVETG++KPGMVV+F PS +TTEVKSVEMHHE L E LPGDNVGFNVKNV+VKD++RG VAS+SK+DPA+EAA+F +QVI++NHPGQIG GYAPVLDCHT+HIA KFSEL+ KIDRR+GK +E  PKF+K+GDA +VK++P+KPM VE++++YPPLGRF
Sbjct:  246 LRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVSFAPSNVTTEVKSVEMHHEQLAEGLPGDNVGFNVKNVSVKDIRRGDVASDSKNDPAKEAASFNAQVIVLNHPGQIGAGYAPVLDCHTAHIACKFSELIEKIDRRTGKTMEAAPKFVKSGDAAIVKLVPSKPMCVESYNEYPPLGRF 424
[Close]
BLAST of BQ623198 vs. ExPASy Swiss-Prot
Match: EF1A_TRYBB (Elongation factor 1-alpha OS=Trypanosoma brucei brucei GN=TEF1 PE=1 SV=3)

HSP 1 Score: 293.123 bits (749), Expect = 7.078e-79
Identity = 138/179 (77.09%), Postives = 160/179 (89.39%), Query Frame = 2 
Query:    2 LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRF 538
            LRLPLQDVYKIGGIGTVPVGRVETGV+KPG VVTF P+ +TTEVKS+EMHHE L EA PGDNVGFNVKNV+VKD++RG V  N+K+DP +EAA+FT+QVII+NHPGQIGNGYAPVLDCHTSHIA KF+E+ +KIDRRSGKELEK PK +K+GDA +V+M+P KPM VE F+DY PLGRF
Sbjct:  234 LRLPLQDVYKIGGIGTVPVGRVETGVMKPGDVVTFAPANVTTEVKSIEMHHEQLAEATPGDNVGFNVKNVSVKDIRRGNVCGNTKNDPPKEAADFTAQVIILNHPGQIGNGYAPVLDCHTSHIACKFAEIESKIDRRSGKELEKAPKSIKSGDAAIVRMVPQKPMCVEVFNDYAPLGRF 412
[Close]
BLAST of BQ623198 vs. ExPASy Swiss-Prot
Match: EF1A_ABSGL (Elongation factor 1-alpha OS=Absidia glauca GN=TEF-1 PE=3 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 7.078e-79
Identity = 138/179 (77.09%), Postives = 162/179 (90.50%), Query Frame = 2 
Query:    2 LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRF 538
            LRLPLQDVYKIGGIGTVPVGRVETGV+K GMVVTF P+ +TTEVKSVEMHHE L E LPGDNVGFNVKNV+VKD++RG V S+SK+DPA+EA +FT+QVI++NHPGQIG GYAPVLDCHT+HIA KF+EL+ KIDRRSGK+LE  PKF+K+GD+ +VKMIP+KPM VE ++DYPPLGRF
Sbjct:  244 LRLPLQDVYKIGGIGTVPVGRVETGVIKAGMVVTFAPANVTTEVKSVEMHHEQLVEGLPGDNVGFNVKNVSVKDIRRGNVCSDSKNDPAKEAGSFTAQVIVLNHPGQIGAGYAPVLDCHTAHIACKFAELLEKIDRRSGKKLEDAPKFVKSGDSAIVKMIPSKPMCVEAYTDYPPLGRF 422
[Close]
BLAST of BQ623198 vs. ExPASy Swiss-Prot
Match: EF1A1_HORSE (Elongation factor 1-alpha 1 OS=Equus caballus GN=EEF1A1 PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 9.244e-79
Identity = 143/179 (79.89%), Postives = 158/179 (88.27%), Query Frame = 2 
Query:    2 LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRF 538
            LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTF P  +TTEVKSVEMHHEAL EALPGDNVGFNVKNV+VKD++RG VA +SK+DP  EAA FT+QVII+NHPGQI  GYAPV DCHT+HIA KF+EL  KIDRRSGK+LE  PKFLK+GDA +V M+P KPM VE+FSDYPPLGRF
Sbjct:  246 LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVPDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRF 424
The following BLAST results are available for this feature:
BLAST of BQ623198 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
EF1A1_MOUSE1.426e-7980.45Elongation factor 1-alpha 1 OS=Mus musculus GN=Eef... [more]
EF1A1_HUMAN1.426e-7980.45Elongation factor 1-alpha 1 OS=Homo sapiens GN=EEF... [more]
EF1A1_FELCA1.426e-7980.45Elongation factor 1-alpha 1 OS=Felis catus GN=EEF1... [more]
EF1A1_CRIGR1.426e-7980.45Elongation factor 1-alpha 1 OS=Cricetulus griseus ... [more]
EF1A1_BOVIN1.426e-7980.45Elongation factor 1-alpha 1 OS=Bos taurus GN=EEF1A... [more]
EF1A0_XENLA1.426e-7979.89Elongation factor 1-alpha, somatic form OS=Xenopus... [more]
EF1A_PIRIN2.433e-7975.98Elongation factor 1-alpha OS=Piriformospora indica... [more]
EF1A_TRYBB7.078e-7977.09Elongation factor 1-alpha OS=Trypanosoma brucei br... [more]
EF1A_ABSGL7.078e-7977.09Elongation factor 1-alpha OS=Absidia glauca GN=TEF... [more]
EF1A1_HORSE9.244e-7979.89Elongation factor 1-alpha 1 OS=Equus caballus GN=E... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00289 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00289 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623198 ID=BQ623198; Name=BQ623198; organism=Citrus sinensis; type=EST; length=603bp
CCTTCGTCTGCCACTCCAGGACGTGTACAAGATTGGTGGCATTGGAACCG
TCCCAGTGGGTCGCGTTGAGACCGGTGTGCTCAAGCCTGGTATGGTGGTG
ACATTTGGTCCCTCTGGATTGACAACTGAGGTTAAGTCTGTTGAGATGCA
CCACGAAGCTCTGCAGGAGGCCCTTCCGGGTGACAATGTTGGCTTCAACG
TGAAGAACGTTGCTGTCAAGGATCTCAAGCGTGGTTTTGTTGCTTCCAAC
TCGAAGGATGATCCGGCCAGGGAAGCTGCCAACTTCACTTCACAGGTCAT
CATCATGAACCATCCTGGCCAGATTGGAAATGGATATGCCCCAGTGCTTG
ACTGCCACACCTCCCACATTGCTGTCAAGTTTTCTGAGCTTGTGACCAAG
ATTGACAGGCGATCTGGCAAGGAGCTTGAGAAGGAGCCCAAGTTCTTGAA
GAATGGAGATGCCGGAATGGTTAAGATGATTCCCACCAAGCCCATGGTTG
TTGAGACCTTCTCCGACTACCCACCCCTTGGTCGTTTTTGCTGTTAGGGA
CATGCGTCAGACTGTAGCTGTTGGTGTGATCAAGAGTGTTGAAAAGAAGG
ATC
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