BQ623221

Overview
NameBQ623221
Unique NameBQ623221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length620
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYB15_ANTMA (Myb-related protein 315 OS=Antirrhinum majus GN=MYB315 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.678e-38
Identity = 70/119 (58.82%), Postives = 87/119 (73.11%), Query Frame = 3
Query:   27 MGRPPCCDKIGIKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKVRKL 383
            M R PC +K G+K+GPWT EED  L SY+ ++G   WR +P   GL RC KSCRLRW NYLRP +K+G  T+ EE  II L A LGNRW+ IA ++P RTDN+IKNYWNTH+KKK++ L
Sbjct:    1 MERQPCREKFGLKRGPWTEEEDQKLTSYVLKNGIQGWRVIPKLAGLSRCGKSCRLRWMNYLRPDLKKGPLTEMEENQIIELHAHLGNRWSKIALHIPGRTDNEIKNYWNTHIKKKLKLL 119          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYB86_ARATH (Transcription factor MYB86 OS=Arabidopsis thaliana GN=MYB86 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.855e-37
Identity = 71/118 (60.17%), Postives = 87/118 (73.73%), Query Frame = 3
Query:   27 MGRPPCCDKIGIKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKVRK 380
            MGR  CC K  ++KG W+PEED  L++YI  HG G W +VP   GL RC KSCRLRW NYLRP +KRG F+  EE +II L A LGNRW+ IA+ LP RTDN+IKN+WN+ LKKK+R+
Sbjct:    1 MGRHSCCFKQKLRKGLWSPEEDEKLLNYITRHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSQDEESLIIELHAALGNRWSQIATRLPGRTDNEIKNFWNSCLKKKLRR 118          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYB23_ARATH (Transcription factor MYB23 OS=Arabidopsis thaliana GN=MYB23 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.855e-37
Identity = 76/142 (53.52%), Postives = 90/142 (63.38%), Query Frame = 3
Query:   63 KKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKV-----RKLQLAAAGCSEDNSQYRDELASASSQQISRGQ 473
            KKG WT EED IL+ Y++ HG G+W  +   TGL RC KSCRLRW NYL P + RGNFTDQEE +II L  LLGNRW+ IA  +P RTDN +KNYWNTHL KK+          AA G     S       S+S Q+IS G+
Sbjct:   13 KKGLWTVEEDKILMDYVRTHGQGHWNRIAKKTGLKRCGKSCRLRWMNYLSPNVNRGNFTDQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKLGLGDHSTAVKAACGVESPPSMALITTTSSSHQEISGGK 154          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYBC_MAIZE (Anthocyanin regulatory C1 protein OS=Zea mays GN=C1 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.423e-37
Identity = 81/185 (43.78%), Postives = 101/185 (54.59%), Query Frame = 3
Query:   27 MGRPPCCDKIGIKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKVRKLQLAAAGCSEDNSQYRDELASASSQQISRGQWERRLQTDIHMAKQALCAALSPDKASILSELKAC*W 581
            MGR  CC K G+K+G WT +ED  L +Y++ HG G WR VP   GL RC KSCRLRW NYLRP I+RGN +  EE +II L  LLGNRW+ IA  LP RTDN+IKNYWN+ L ++      A AG          +  S ++   + G  E    +  H A         PD A   +   A  W
Sbjct:    1 MGRRACCAKEGVKRGAWTSKEDDALAAYVKAHGEGKWREVPQKAGLRRCGKSCRLRWLNYLRPNIRRGNISYDEEDLIIRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNSTLGRRAG----AGAGAGGSWVVVAPDTGSHATPAATSGACETGQNSAAHRA--------DPDSAGTTTTSAAAVW 173          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: GAM1_ORYSJ (Transcription factor GAMYB OS=Oryza sativa subsp. japonica GN=GAM1 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.423e-37
Identity = 67/113 (59.29%), Postives = 86/113 (76.11%), Query Frame = 3
Query:   30 GRPPCCDKIGIKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKK 368
            G PP      +KKGPWT  ED ILV Y+++HG GNW AV  NTGL RC KSCRLRW N+LRP +K+G FT +EE++II L + +GN+WA +A++LP RTDN+IKNYWNT +K+
Sbjct:   36 GGPP------LKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFTAEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKR 142          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: GAM1_ORYSI (Transcription factor GAMYB OS=Oryza sativa subsp. indica GN=GAM1 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.423e-37
Identity = 67/113 (59.29%), Postives = 86/113 (76.11%), Query Frame = 3
Query:   30 GRPPCCDKIGIKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKK 368
            G PP      +KKGPWT  ED ILV Y+++HG GNW AV  NTGL RC KSCRLRW N+LRP +K+G FT +EE++II L + +GN+WA +A++LP RTDN+IKNYWNT +K+
Sbjct:   36 GGPP------LKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFTAEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKR 142          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: WER_ARATH (Transcription factor WER OS=Arabidopsis thaliana GN=WER PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.051e-36
Identity = 66/104 (63.46%), Postives = 78/104 (75.00%), Query Frame = 3
Query:   63 KKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKV 374
            KKG WT EED IL+ Y++ HG G+W  +   TGL RC KSCRLRW NYL P +KRGNFT+QEE +II L  LLGNRW+ IA  +P RTDN +KNYWNTHL KK+
Sbjct:   17 KKGLWTVEEDKILMDYVKAHGKGHWNRIAKKTGLKRCGKSCRLRWMNYLSPNVKRGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKL 120          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: GL1_ARATH (Trichome differentiation protein GL1 OS=Arabidopsis thaliana GN=GL1 PE=1 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 5.052e-35
Identity = 64/104 (61.54%), Postives = 75/104 (72.12%), Query Frame = 3
Query:   63 KKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKV 374
            KKG WT EED IL+ Y+  HG G W  +   TGL RC KSCRLRW NYL P + +GNFT+QEE +II L  LLGNRW+ IA  +P RTDN +KNYWNTHL KK+
Sbjct:   15 KKGLWTVEEDNILMDYVLNHGTGQWNRIVRKTGLKRCGKSCRLRWMNYLSPNVNKGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKL 118          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: GL1_ARALY (Trichome differentiation protein GL1 OS=Arabidopsis lyrata GN=GL1 PE=3 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 5.052e-35
Identity = 64/104 (61.54%), Postives = 75/104 (72.12%), Query Frame = 3
Query:   63 KKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKV 374
            KKG WT EED IL+ Y+  HG G W  +   TGL RC KSCRLRW NYL P + +GNFT+QEE +II L  LLGNRW+ IA  +P RTDN +KNYWNTHL KK+
Sbjct:   15 KKGLWTVEEDNILMDYVLNHGTGQWNRIVRKTGLKRCGKSCRLRWMNYLSPNVNKGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKL 118          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYB82_ARATH (Transcription factor MYB82 OS=Arabidopsis thaliana GN=MYB82 PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.125e-34
Identity = 67/138 (48.55%), Postives = 90/138 (65.22%), Query Frame = 3
Query:   60 IKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKVRKLQLAAAGCSEDNSQYRDELASASSQQISRGQ 473
            +K+G W PEED+IL SY++ HG GNW  +   +GL R  KSCRLRW NYLRP IKRG+ + QE+ +II +  LLGNRW+ IA  LP RTDN++KNYWNTHL KK    +  A       + + D+   ++  + S G+
Sbjct:   12 VKRGLWKPEEDMILKSYVETHGEGNWADISRRSGLKRGGKSCRLRWKNYLRPNIKRGSMSPQEQDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKKPNSRRQNAPESIVGATPFTDKPVMSTELRRSHGE 149          
The following BLAST results are available for this feature:
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
MYB15_ANTMA1.678e-3858.82Myb-related protein 315 OS=Antirrhinum majus GN=MY... [more]
MYB86_ARATH1.855e-3760.17Transcription factor MYB86 OS=Arabidopsis thaliana... [more]
MYB23_ARATH1.855e-3753.52Transcription factor MYB23 OS=Arabidopsis thaliana... [more]
MYBC_MAIZE2.423e-3743.78Anthocyanin regulatory C1 protein OS=Zea mays GN=C... [more]
GAM1_ORYSJ2.423e-3759.29Transcription factor GAMYB OS=Oryza sativa subsp. ... [more]
GAM1_ORYSI2.423e-3759.29Transcription factor GAMYB OS=Oryza sativa subsp. ... [more]
WER_ARATH2.051e-3663.46Transcription factor WER OS=Arabidopsis thaliana G... [more]
GL1_ARATH5.052e-3561.54Trichome differentiation protein GL1 OS=Arabidopsi... [more]
GL1_ARALY5.052e-3561.54Trichome differentiation protein GL1 OS=Arabidopsi... [more]
MYB82_ARATH1.125e-3448.55Transcription factor MYB82 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00312 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00312 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623221 ID=BQ623221; Name=BQ623221; organism=Citrus sinensis; type=EST; length=620bp
AGAAGAAGAACTTTAACAAATTTGATATGGGGAGGCCACCTTGTTGTGAC
AAAATTGGTATCAAGAAAGGGCCATGGACTCCAGAAGAAGATATCATTTT
AGTTTCTTATATTCAAGAGCATGGCCCTGGAAATTGGAGGGCTGTTCCCA
CTAATACAGGATTGCTTAGATGCAGCAAAAGTTGCAGGCTTAGATGGACT
AATTACCTAAGGCCAGGGATCAAGCGTGGGAATTTCACTGATCAAGAAGA
GAAGATGATAATTCATCTGCAAGCACTTTTGGGCAACAGATGGGCGGCTA
TTGCTTCTTATCTCCCTCAGAGAACTGACAATGACATCAAGAACTATTGG
AATACTCACTTGAAGAAGAAGGTGAGGAAGCTGCAACTAGCTGCTGCTGG
CTGCTCTGAAGATAATAGCCAATATAGAGATGAGCTAGCTTCAGCTTCTT
CACAGCAAATCTCAAGGGGTCAGTGGGAGAGAAGGCTGCAGACTGATATT
CACATGGCTAAGCAAGCTCTATGTGCGGCCTTGTCACCAGATAAAGCGAG
TATTTTGTCTGAATTGAAAGCCTGCTAATGGGTTCATTTCCTACACAAAA
CCAGCAGTTCAAGCACCAGC
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