BQ623221

Overview
NameBQ623221
Unique NameBQ623221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length620
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYB21_ARATH (Transcription factor MYB21 OS=Arabidopsis thaliana GN=MYB21 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.470e-34
Identity = 64/136 (47.06%), Postives = 92/136 (67.65%), Query Frame = 3
Query:   60 IKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKVRKLQLAAAGC--SEDNSQYRDELASASSQQI 461
            ++KGPWT EED+IL++YI  HG G W ++  + GL R  KSCRLRW NYLRP ++RGN T +E+ +I+ L A  GNRW+ IA +LP RTDN+IKN+W T ++K +++  +       S  +S+  D+ AS SS  +
Sbjct:   20 VRKGPWTMEEDLILINYIANHGDGVWNSLAKSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLIIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKYIKQSDVTTTSSVGSHHSSEINDQAASTSSHNV 155          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: TT2_ARATH (Transcription factor TT2 OS=Arabidopsis thaliana GN=TT2 PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.275e-34
Identity = 64/109 (58.72%), Postives = 78/109 (71.56%), Query Frame = 3
Query:   60 IKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKVRKLQ 386
            + +G WT  ED IL  YI  HG G W  +P   GL RC KSCRLRW NYLRPGIKRGN +  EE++II L  LLGNRW+ IA  LP RTDN+IKN+WN++L+K++ K Q
Sbjct:   14 LNRGAWTDHEDKILRDYITTHGEGKWSTLPNQAGLKRCGKSCRLRWKNYLRPGIKRGNISSDEEELIIRLHNLLGNRWSLIAGRLPGRTDNEIKNHWNSNLRKRLPKTQ 122          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYB40_ANTMA (Myb-related protein 340 OS=Antirrhinum majus GN=MYB340 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.275e-34
Identity = 67/143 (46.85%), Postives = 96/143 (67.13%), Query Frame = 3
Query:   27 MGRPPC-CDKIGIKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWN-THLKKKVRKLQLAAAGCSEDNSQYRDELASAS 449
            M + PC    + ++KGPWT EED+IL+++I  HG G W  +  + GL R  KSCRLRW NYLRP ++RGN T +E+ +I+ L A  GNRW+ IA +LP RTDN+IKNYWN T ++K +++ + +  G    N ++ +E AS S
Sbjct:    1 MDKKPCNSHDVEVRKGPWTMEEDLILINFISNHGEGVWNTIARSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNYWNRTRIQKHIKQAEASFIG--HINPEHSNEQASTS 141          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYB05_ANTMA (Myb-related protein 305 OS=Antirrhinum majus GN=MYB305 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.772e-33
Identity = 67/149 (44.97%), Postives = 96/149 (64.43%), Query Frame = 3
Query:   27 MGRPPCCDK-IGIKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKVRKLQLAAAGCSEDNSQYRDELAS--ASSQQIS 464
            M + PC  + + ++KGPWT EED+IL++YI  HG G W ++  + GL R  KSCRLRW NYLRP ++RGN T +E+ +I+ L A  GNRW+ IA  LP RTDN+IKNYW T ++K + +   +++    +     D   +  ASS Q+S
Sbjct:    1 MDKKPCNSQDVEVRKGPWTMEEDLILINYIANHGEGVWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKTLPGRTDNEIKNYWRTRIQKHMEQGDQSSSTTFNNGQMNLDHSCNDQASSSQMS 149          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MY113_ARATH (Transcription factor MYB113 OS=Arabidopsis thaliana GN=MYB113 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 4.728e-33
Identity = 62/105 (59.05%), Postives = 73/105 (69.52%), Query Frame = 3
Query:   57 GIKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKK 371
            G++KG WT EEDI+L   I ++G G W  VP  TGL RC KSCRLRW NYL+P IKRG     E  +++ L  LLGNRW+ IA  LP RT ND+KNYWNTHL KK
Sbjct:    7 GLRKGTWTTEEDILLRQCIDKYGEGKWHRVPLRTGLNRCRKSCRLRWLNYLKPSIKRGKLCSDEVDLVLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYB46_ARATH (Transcription factor MYB46 OS=Arabidopsis thaliana GN=MYB46 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 6.176e-33
Identity = 69/138 (50.00%), Postives = 90/138 (65.22%), Query Frame = 3
Query:   60 IKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKVRKL----QLAAAGCSEDNSQYRDELASASSQQI 461
            +KKG W+PEED  L+ Y+  +G G W  V  N GL RC KSCRLRW NYLRP +KRG F+ QEE +II   ++LGNRW+ IA+ LP RTDN+IKN+WN+ +KK+++K+     L     S  N+       SASS  I
Sbjct:   18 MKKGLWSPEEDSKLMQYMLSNGQGCWSDVAKNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEDLIIRFHSILGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKKMSDTSNLINNSSSSPNTASDSSSNSASSLDI 155          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYB3_HORVU (Myb-related protein Hv33 OS=Hordeum vulgare GN=MYB2 PE=2 SV=3)

HSP 1 Score: 139.428 bits (350), Expect = 1.376e-32
Identity = 66/120 (55.00%), Postives = 85/120 (70.83%), Query Frame = 3
Query:   27 MGRPP--CCDKIGIKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKVRK 380
            MGRP      +  ++KG W+PEED  L ++I  HG G W +VP    L RC KSCRLRW NYLRP +KRG F+ QEE  I+ L  +LGNRW+ IAS+LP RTDN+IKN+WN+ +KKK+R+
Sbjct:    1 MGRPSSGAVGQPKVRKGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWINYLRPDLKRGCFSQQEEDHIVALHQILGNRWSQIASHLPGRTDNEIKNFWNSCIKKKLRQ 120          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MY114_ARATH (Transcription factor MYB114 OS=Arabidopsis thaliana GN=MYB114 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.347e-32
Identity = 61/105 (58.10%), Postives = 73/105 (69.52%), Query Frame = 3
Query:   57 GIKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKK 371
            G++KG WT EED +L   I ++G G W  VP   GL RC KSCRLRW NYL+P IKRG F+  E  +++ L  LLGNRW+ IA  LP RT ND+KNYWNTHL KK
Sbjct:    7 GLRKGAWTAEEDSLLRQCIGKYGEGKWHQVPLRAGLNRCRKSCRLRWLNYLKPSIKRGKFSSDEVDLLLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYB75_ARATH (Transcription factor MYB75 OS=Arabidopsis thaliana GN=MYB75 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 5.228e-32
Identity = 60/105 (57.14%), Postives = 72/105 (68.57%), Query Frame = 3
Query:   57 GIKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKK 371
            G++KG WT EED +L   I ++G G W  VP   GL RC KSCRLRW NYL+P IKRG  +  E  +++ L  LLGNRW+ IA  LP RT ND+KNYWNTHL KK
Sbjct:    7 GLRKGAWTTEEDSLLRQCINKYGEGKWHQVPVRAGLNRCRKSCRLRWLNYLKPSIKRGKLSSDEVDLLLRLHRLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYB90_ARATH (Transcription factor MYB90 OS=Arabidopsis thaliana GN=MYB90 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 8.917e-32
Identity = 60/105 (57.14%), Postives = 73/105 (69.52%), Query Frame = 3
Query:   57 GIKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKK 371
            G++KG WT EED +L   I ++G G W  VP   GL RC KSCRLRW NYL+P IKRG  ++ E  +++ L  LLGNRW+ IA  LP RT ND+KNYWNTHL KK
Sbjct:    7 GLRKGAWTAEEDSLLRLCIDKYGEGKWHQVPLRAGLNRCRKSCRLRWLNYLKPSIKRGRLSNDEVDLLLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111          
The following BLAST results are available for this feature:
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
MYB21_ARATH1.470e-3447.06Transcription factor MYB21 OS=Arabidopsis thaliana... [more]
TT2_ARATH3.275e-3458.72Transcription factor TT2 OS=Arabidopsis thaliana G... [more]
MYB40_ANTMA3.275e-3446.85Myb-related protein 340 OS=Antirrhinum majus GN=MY... [more]
MYB05_ANTMA2.772e-3344.97Myb-related protein 305 OS=Antirrhinum majus GN=MY... [more]
MY113_ARATH4.728e-3359.05Transcription factor MYB113 OS=Arabidopsis thalian... [more]
MYB46_ARATH6.176e-3350.00Transcription factor MYB46 OS=Arabidopsis thaliana... [more]
MYB3_HORVU1.376e-3255.00Myb-related protein Hv33 OS=Hordeum vulgare GN=MYB... [more]
MY114_ARATH2.347e-3258.10Transcription factor MYB114 OS=Arabidopsis thalian... [more]
MYB75_ARATH5.228e-3257.14Transcription factor MYB75 OS=Arabidopsis thaliana... [more]
MYB90_ARATH8.917e-3257.14Transcription factor MYB90 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00312 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00312 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623221 ID=BQ623221; Name=BQ623221; organism=Citrus sinensis; type=EST; length=620bp
AGAAGAAGAACTTTAACAAATTTGATATGGGGAGGCCACCTTGTTGTGAC
AAAATTGGTATCAAGAAAGGGCCATGGACTCCAGAAGAAGATATCATTTT
AGTTTCTTATATTCAAGAGCATGGCCCTGGAAATTGGAGGGCTGTTCCCA
CTAATACAGGATTGCTTAGATGCAGCAAAAGTTGCAGGCTTAGATGGACT
AATTACCTAAGGCCAGGGATCAAGCGTGGGAATTTCACTGATCAAGAAGA
GAAGATGATAATTCATCTGCAAGCACTTTTGGGCAACAGATGGGCGGCTA
TTGCTTCTTATCTCCCTCAGAGAACTGACAATGACATCAAGAACTATTGG
AATACTCACTTGAAGAAGAAGGTGAGGAAGCTGCAACTAGCTGCTGCTGG
CTGCTCTGAAGATAATAGCCAATATAGAGATGAGCTAGCTTCAGCTTCTT
CACAGCAAATCTCAAGGGGTCAGTGGGAGAGAAGGCTGCAGACTGATATT
CACATGGCTAAGCAAGCTCTATGTGCGGCCTTGTCACCAGATAAAGCGAG
TATTTTGTCTGAATTGAAAGCCTGCTAATGGGTTCATTTCCTACACAAAA
CCAGCAGTTCAAGCACCAGC
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