BQ623221

Overview
NameBQ623221
Unique NameBQ623221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length620
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYB59_ARATH (Transcription factor MYB59 OS=Arabidopsis thaliana GN=MYB59 PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 8.917e-32
Identity = 61/131 (46.56%), Postives = 86/131 (65.65%), Query Frame = 3
Query:   63 KKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKVRKLQLAAAGCSEDNSQYRDELASASSQ 455
            +KGPWT +EDI+LV+++   G   W  V   +GL R  KSCRLRW NYL PG+KRG  T QEE++++ L A  GNRW+ IA  LP RTDN+IKNYW TH++KK ++ +   +  S  ++     + + +SQ
Sbjct:    9 RKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPMSPTSSSSNCCSSSMTTTTSQ 139          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYB48_ARATH (Transcription factor MYB48 OS=Arabidopsis thaliana GN=MYB48 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.595e-31
Identity = 58/108 (53.70%), Postives = 77/108 (71.30%), Query Frame = 3
Query:   57 GIKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKVRK 380
            G +KGPWT +EDI+LV+++   G   W  +   +GL R  KSCRLRW NYL PG+KRG  T QEE++++ L A  GNRW+ IA  LP RTDN+IKNYW TH++KK ++
Sbjct:    6 GNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQE 113          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYBA2_ORYSJ (Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica GN=MYBAS2 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.142e-29
Identity = 58/120 (48.33%), Postives = 79/120 (65.83%), Query Frame = 3
Query:   60 IKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKVRKLQLAAAGCSEDNS 419
            I+KGPWT +ED+ LV  ++  G   W  +   +GL R  KSCRLRW NYL PG+KRG  +  EE++I+ L A  GNRW+ IA  LP RTDN+IKNYW TH++KK ++ +   +  S  +S
Sbjct:    8 IRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERKSNMSPSSSSSS 127          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: LAF1_ARATH (Transcription factor LAF1 OS=Arabidopsis thaliana GN=LAF1 PE=1 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 4.142e-29
Identity = 59/108 (54.63%), Postives = 75/108 (69.44%), Query Frame = 3
Query:   63 KKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKVRKLQ 386
            +KG W+PEED  L S+I  +G   W  VP   GL R  KSCRLRW NYLRPG+KR   + +EE+ I+   + LGN+W+ IA +LP RTDN+IKNYW++HLKKK  K Q
Sbjct:   11 RKGLWSPEEDEKLRSFILSYGHSCWTTVPIKAGLQRNGKSCRLRWINYLRPGLKRDMISAEEEETILTFHSSLGNKWSQIAKFLPGRTDNEIKNYWHSHLKKKWLKSQ 118          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYBA1_ORYSJ (Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica GN=MYBAS1 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.507e-28
Identity = 56/107 (52.34%), Postives = 73/107 (68.22%), Query Frame = 3
Query:   60 IKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKVRK 380
            ++KGPWT +ED+ LV  ++  G   W  V   +GL R  KSCRLRW NYL PG+K G  + +EE +II L A  GNRW+ IA  LP RTDN+IKNYW TH++KK ++
Sbjct:    8 MRKGPWTEQEDLQLVCTVRLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKHGRMSPKEEHLIIELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQE 114          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MY104_ARATH (Transcription factor MYB104 OS=Arabidopsis thaliana GN=MYB104 PE=2 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 4.287e-26
Identity = 54/130 (41.54%), Postives = 78/130 (60.00%), Query Frame = 3
Query:   66 KGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKVRKLQLAAAGCSEDNSQYRDELASASSQ 455
            K  W PEED IL  Y+ ++G   W  VP  TGL     SCR RW N+L+P +K+G FTD+EEK ++ L A+LGN+W+ +A   P RTDN+IKN+WN       R+++L   G      + R++    ++Q
Sbjct:   18 KSKWKPEEDRILKDYVIQYGDRTWTHVPKRTGLPHNPASCRFRWMNHLKPSLKKGPFTDEEEKRVLQLHAVLGNKWSQMAREFPGRTDNEIKNFWN------ARRMRLKGKGLPVYPDEVREQAIRTAAQ 141          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYBA_MOUSE (Myb-related protein A OS=Mus musculus GN=Mybl1 PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.291e-22
Identity = 48/118 (40.68%), Postives = 72/118 (61.02%), Query Frame = 3
Query:   66 KGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKVRKLQLAAAGCSEDNS 419
            KGPWT EED  ++  +Q++GP  W  +  +    R  K CR RW N+L P +K+ ++T++E+++I      LGNRWA IA  LP RTDN IKN+WN+ +++KV +      G   + S
Sbjct:   87 KGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKG-RIGKQCRERWHNHLNPEVKKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVEQEGYLQDGIKSERS 203          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYBA_HUMAN (Myb-related protein A OS=Homo sapiens GN=MYBL1 PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.291e-22
Identity = 48/118 (40.68%), Postives = 72/118 (61.02%), Query Frame = 3
Query:   66 KGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKVRKLQLAAAGCSEDNS 419
            KGPWT EED  ++  +Q++GP  W  +  +    R  K CR RW N+L P +K+ ++T++E+++I      LGNRWA IA  LP RTDN IKN+WN+ +++KV +      G   + S
Sbjct:   87 KGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKG-RIGKQCRERWHNHLNPEVKKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVEQEGYLQDGIKSERS 203          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYB_AVIMB (Transforming protein Myb OS=Avian myeloblastosis virus GN=V-MYB PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 2.202e-22
Identity = 45/107 (42.06%), Postives = 71/107 (66.36%), Query Frame = 3
Query:   60 IKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKVRK 380
            + KGPWT EED  ++ ++Q++GP  W  +  +    R  K CR RW N+L P +K+ ++T++E+++I      LGNRWA IA  LP RTDN +KN+WN+ +++KV +
Sbjct:   19 LNKGPWTKEEDQRVIEHVQKYGPKRWSDIAKHLKG-RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAVKNHWNSTMRRKVEQ 124          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYBA_CHICK (Myb-related protein A OS=Gallus gallus GN=MYBL1 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.875e-22
Identity = 50/129 (38.76%), Postives = 77/129 (59.69%), Query Frame = 3
Query:   66 KGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKVRKLQLAAAGCSEDNSQYRDELASASS 452
            KGPWT EED  ++  +Q++GP  W  +  +    R  K CR RW N+L P +K+ ++T+ E+++I      LGNRWA IA  LP RTDN IKN+WN+ +++KV +      G  +D ++   E   +S+
Sbjct:   87 KGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKG-RIGKQCRERWHNHLNPEVKKSSWTEAEDRVIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVEQ-----EGYLQDGTKSSSERTGSST 209          
The following BLAST results are available for this feature:
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
MYB59_ARATH8.917e-3246.56Transcription factor MYB59 OS=Arabidopsis thaliana... [more]
MYB48_ARATH2.595e-3153.70Transcription factor MYB48 OS=Arabidopsis thaliana... [more]
MYBA2_ORYSJ4.142e-2948.33Myb-related protein MYBAS2 OS=Oryza sativa subsp. ... [more]
LAF1_ARATH4.142e-2954.63Transcription factor LAF1 OS=Arabidopsis thaliana ... [more]
MYBA1_ORYSJ3.507e-2852.34Myb-related protein MYBAS1 OS=Oryza sativa subsp. ... [more]
MY104_ARATH4.287e-2641.54Transcription factor MYB104 OS=Arabidopsis thalian... [more]
MYBA_MOUSE1.291e-2240.68Myb-related protein A OS=Mus musculus GN=Mybl1 PE=... [more]
MYBA_HUMAN1.291e-2240.68Myb-related protein A OS=Homo sapiens GN=MYBL1 PE=... [more]
MYB_AVIMB2.202e-2242.06Transforming protein Myb OS=Avian myeloblastosis v... [more]
MYBA_CHICK2.875e-2238.76Myb-related protein A OS=Gallus gallus GN=MYBL1 PE... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00312 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00312 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623221 ID=BQ623221; Name=BQ623221; organism=Citrus sinensis; type=EST; length=620bp
AGAAGAAGAACTTTAACAAATTTGATATGGGGAGGCCACCTTGTTGTGAC
AAAATTGGTATCAAGAAAGGGCCATGGACTCCAGAAGAAGATATCATTTT
AGTTTCTTATATTCAAGAGCATGGCCCTGGAAATTGGAGGGCTGTTCCCA
CTAATACAGGATTGCTTAGATGCAGCAAAAGTTGCAGGCTTAGATGGACT
AATTACCTAAGGCCAGGGATCAAGCGTGGGAATTTCACTGATCAAGAAGA
GAAGATGATAATTCATCTGCAAGCACTTTTGGGCAACAGATGGGCGGCTA
TTGCTTCTTATCTCCCTCAGAGAACTGACAATGACATCAAGAACTATTGG
AATACTCACTTGAAGAAGAAGGTGAGGAAGCTGCAACTAGCTGCTGCTGG
CTGCTCTGAAGATAATAGCCAATATAGAGATGAGCTAGCTTCAGCTTCTT
CACAGCAAATCTCAAGGGGTCAGTGGGAGAGAAGGCTGCAGACTGATATT
CACATGGCTAAGCAAGCTCTATGTGCGGCCTTGTCACCAGATAAAGCGAG
TATTTTGTCTGAATTGAAAGCCTGCTAATGGGTTCATTTCCTACACAAAA
CCAGCAGTTCAAGCACCAGC
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