BQ623221

Overview
NameBQ623221
Unique NameBQ623221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length620
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MB3R1_ARATH (Myb-related protein 3R-1 OS=Arabidopsis thaliana GN=MYB3R-1 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.423e-21
Identity = 42/103 (40.78%), Postives = 65/103 (63.11%), Query Frame = 3
Query:   66 KGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKV 374
            KGPW+ EED  ++  ++++GP  W  +  +    R  K CR RW N+L PGI +  +T +EE  +I    + GN+WA +  +LP R+DN IKN+WN+ +KKK+
Sbjct:   87 KGPWSKEEDNTIIDLVEKYGPKKWSTISQHLPG-RIGKQCRERWHNHLNPGINKNAWTQEEELTLIRAHQIYGNKWAELMKFLPGRSDNSIKNHWNSSVKKKL 188          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYBB_MOUSE (Myb-related protein B OS=Mus musculus GN=Mybl2 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 7.082e-21
Identity = 44/103 (42.72%), Postives = 67/103 (65.05%), Query Frame = 3
Query:   66 KGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKV 374
            KGPWT EED  ++  ++++G   W  +  +    R  K CR RW N+L P +K+  +T++E+++I     +LGNRWA IA  LP RTDN +KN+WN+ +K+KV
Sbjct:   83 KGPWTKEEDQKVIELVKKYGTKQWTLIAKHLKG-RLGKQCRERWHNHLNPEVKKSCWTEEEDRIICEAHKVLGNRWAEIAKMLPGRTDNAVKNHWNSTIKRKV 184          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYBB_HUMAN (Myb-related protein B OS=Homo sapiens GN=MYBL2 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 7.082e-21
Identity = 44/103 (42.72%), Postives = 67/103 (65.05%), Query Frame = 3
Query:   66 KGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKV 374
            KGPWT EED  ++  ++++G   W  +  +    R  K CR RW N+L P +K+  +T++E+++I     +LGNRWA IA  LP RTDN +KN+WN+ +K+KV
Sbjct:   83 KGPWTKEEDQKVIELVKKYGTKQWTLIAKHLKG-RLGKQCRERWHNHLNPEVKKSCWTEEEDRIICEAHKVLGNRWAEIAKMLPGRTDNAVKNHWNSTIKRKV 184          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYB44_ARATH (Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.061e-20
Identity = 51/132 (38.64%), Postives = 75/132 (56.82%), Query Frame = 3
Query:   66 KGPWTPEEDIILVSYIQEHGPGNW----RAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKVRKLQLAAAGCSEDNSQYRDELASAS 449
            KGPW+PEED  L   + ++GP NW    +++P  +G     KSCRLRW N L P ++   F+ +E++ I    A  GN+WA IA  L  RTDN +KN+WN+ LK+K           SED+   +  +++ S
Sbjct:    6 KGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSG-----KSCRLRWCNQLSPQVEHRPFSAEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCGGYDHRGYDGSEDHRPVKRSVSAGS 132          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYBQ_DICDI (Myb-like protein Q OS=Dictyostelium discoideum GN=mybQ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.515e-20
Identity = 50/117 (42.74%), Postives = 68/117 (58.12%), Query Frame = 3
Query:   24 DMGRPPCCDKIGIKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKV 374
            D G+P      GI KGPW  EED  LV  + + GP  W ++       R  K CR RW N+L P +++ N+T +E+K+II   A LGN+W AI+  L  R  N IKN+WN+ L KK+
Sbjct:  266 DNGKP---SSPGIVKGPWKDEEDAKLVELVNKCGPKEWSSIAAKIPG-RIGKQCRERWFNHLSPEVRKTNWTPEEDKIIIDAHASLGNKWTAISKMLDGRPANAIKNHWNSTLLKKI 378          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYB_DROME (Myb protein OS=Drosophila melanogaster GN=Myb PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.023e-19
Identity = 47/121 (38.84%), Postives = 73/121 (60.33%), Query Frame = 3
Query:   66 KGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKK--VRKLQLAAAGCSEDNSQ 422
            KGPWT +ED +++  ++  GP  W  +       R  K CR RW N+L P IK+  +T++E+++I      LGN+WA IA  LP RTDN IKN+WN+ +++K  V +  + A+G    +S+
Sbjct:  136 KGPWTRDEDDMVIKLVRNFGPKKWTLIARYLNG-RIGKQCRERWHNHLNPNIKKTAWTEKEDEIIYQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRKYDVERRSVNASGSDLKSSR 255          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYBA_DICDI (Myb-like protein A OS=Dictyostelium discoideum GN=mybA PE=4 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 5.075e-19
Identity = 42/101 (41.58%), Postives = 65/101 (64.36%), Query Frame = 3
Query:   66 KGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKK 368
            KG WT +ED  ++  ++ +GP  W  +  +    R  K CR RW N+L P IK+  ++D+E+++I    A+ GN+WA IA +LP RTDN IKN+WN+ +K+
Sbjct:  201 KGAWTKDEDDKVIELVKTYGPKKWSDIALHLKG-RMGKQCRERWHNHLNPNIKKEAWSDEEDQIIRDQHAIHGNKWAEIAKFLPGRTDNAIKNHWNSSMKR 300          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYB98_ARATH (Transcription factor MYB98 OS=Arabidopsis thaliana GN=MYB98 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.131e-18
Identity = 42/110 (38.18%), Postives = 67/110 (60.91%), Query Frame = 3
Query:   51 KIGIKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKVRK 380
            K  + KG WT EED +L+  ++++G   W  +       R  K CR RW N+LRP IK+  ++++E++++I     +GN+WA IA  LP RT+N IKN+WN   +++  K
Sbjct:  212 KSTLVKGQWTAEEDRVLIQLVEKYGLRKWSHI-AQVLPGRIGKQCRERWHNHLRPDIKKETWSEEEDRVLIEFHKEIGNKWAEIAKRLPGRTENSIKNHWNATKRRQFSK 320          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: AS1_ARATH (Transcription factor AS1 OS=Arabidopsis thaliana GN=AS1 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.477e-18
Identity = 42/104 (40.38%), Postives = 66/104 (63.46%), Query Frame = 3
Query:   75 WTPEEDIILVSYIQEHGPGNWRAVPT--NTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKVRK 380
            W+ EED +L +Y+++ GP  W  V    N  L R +KSC  RW NYL+PGIK+G+ T++E++++I LQ   GN+W  IA+ +P RT   +  +W    +K+ R+
Sbjct:    7 WSGEEDALLRAYVRQFGPREWHLVSERMNKPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVIRLQEKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRE 110          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYBAA_DICDI (Myb-like protein AA OS=Dictyostelium discoideum GN=mybAA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.297e-18
Identity = 45/107 (42.06%), Postives = 66/107 (61.68%), Query Frame = 3
Query:   66 KGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKVRKLQ 386
            KG WT EED  L S +  HG   W+ + +    LR  + CR RW+N L P IKR  +T +E+++I+   +  GN+WA I+  LP RT+  IKN+WN+ +K+K+ K Q
Sbjct:  757 KGHWTKEEDEKLRSLVDLHGTKRWKYIASLL-CLRNGRQCRERWSNQLDPSIKRDAWTLEEDRIILDAHSKYGNKWAEISKLLPGRTNCAIKNHWNSTMKRKLSKKQ 862          
The following BLAST results are available for this feature:
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
MB3R1_ARATH5.423e-2140.78Myb-related protein 3R-1 OS=Arabidopsis thaliana G... [more]
MYBB_MOUSE7.082e-2142.72Myb-related protein B OS=Mus musculus GN=Mybl2 PE=... [more]
MYBB_HUMAN7.082e-2142.72Myb-related protein B OS=Homo sapiens GN=MYBL2 PE=... [more]
MYB44_ARATH2.061e-2038.64Transcription factor MYB44 OS=Arabidopsis thaliana... [more]
MYBQ_DICDI3.515e-2042.74Myb-like protein Q OS=Dictyostelium discoideum GN=... [more]
MYB_DROME1.023e-1938.84Myb protein OS=Drosophila melanogaster GN=Myb PE=1... [more]
MYBA_DICDI5.075e-1941.58Myb-like protein A OS=Dictyostelium discoideum GN=... [more]
MYB98_ARATH1.131e-1838.18Transcription factor MYB98 OS=Arabidopsis thaliana... [more]
AS1_ARATH1.477e-1840.38Transcription factor AS1 OS=Arabidopsis thaliana G... [more]
MYBAA_DICDI4.297e-1842.06Myb-like protein AA OS=Dictyostelium discoideum GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00312 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00312 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623221 ID=BQ623221; Name=BQ623221; organism=Citrus sinensis; type=EST; length=620bp
AGAAGAAGAACTTTAACAAATTTGATATGGGGAGGCCACCTTGTTGTGAC
AAAATTGGTATCAAGAAAGGGCCATGGACTCCAGAAGAAGATATCATTTT
AGTTTCTTATATTCAAGAGCATGGCCCTGGAAATTGGAGGGCTGTTCCCA
CTAATACAGGATTGCTTAGATGCAGCAAAAGTTGCAGGCTTAGATGGACT
AATTACCTAAGGCCAGGGATCAAGCGTGGGAATTTCACTGATCAAGAAGA
GAAGATGATAATTCATCTGCAAGCACTTTTGGGCAACAGATGGGCGGCTA
TTGCTTCTTATCTCCCTCAGAGAACTGACAATGACATCAAGAACTATTGG
AATACTCACTTGAAGAAGAAGGTGAGGAAGCTGCAACTAGCTGCTGCTGG
CTGCTCTGAAGATAATAGCCAATATAGAGATGAGCTAGCTTCAGCTTCTT
CACAGCAAATCTCAAGGGGTCAGTGGGAGAGAAGGCTGCAGACTGATATT
CACATGGCTAAGCAAGCTCTATGTGCGGCCTTGTCACCAGATAAAGCGAG
TATTTTGTCTGAATTGAAAGCCTGCTAATGGGTTCATTTCCTACACAAAA
CCAGCAGTTCAAGCACCAGC
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