BQ623227

Overview
NameBQ623227
Unique NameBQ623227
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length605
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig332 contig Csv1_Contig332:488..1092. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623227 vs. ExPASy Swiss-Prot
Match: SEC13_NEUCR (Protein transport protein sec-13 OS=Neurospora crassa GN=sec-13 PE=3 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 6.565e-32
Identity = 80/171 (46.78%), Postives = 109/171 (63.74%), Query Frame = 3
Query:   27 DGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSG---FLDPVQKLCSGGCDNTVKVWKL---YNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV-AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGQWQQVTAV 518
            D  W+ + I  AH +GV SVSWAP+T PG++V S         ++  +GG DN +K+W      NG +K++  P L  HTDWVRDVAW+P + L KS IASAS+D  V IWT  A    +W+ KVL+ F   V+RVSWSL+GN+LA +  NN VTLW+E + G+W+ V  +
Sbjct:  137 DNSWEHN-IFHAHGLGVNSVSWAPATTPGSIVSSNPGPGSTGNRRFVTGGSDNLLKIWTFDPATNG-YKLEREP-LAGHTDWVRDVAWSPTV-LQKSYIASASQDKTVRIWTSDAANPGEWKCKVLN-FDAAVWRVSWSLSGNVLAASSDNNKVTLWKENLKGEWENVKTI 302          
BLAST of BQ623227 vs. ExPASy Swiss-Prot
Match: SEC13_ASPNC (Protein transport protein sec13 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sec13 PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 8.574e-32
Identity = 79/171 (46.20%), Postives = 109/171 (63.74%), Query Frame = 3
Query:    3 ISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK-LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV-AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGQWQQV 509
            +SV   R D  W T +I  AH +GV S+SWAP+ APG+L+ S      Q+   +GG DN +K+W         +    L+ H+DWVRDVAW+P++ L KS IASAS+D  V IWT  A    QW  + L +F T ++RVSWS +GNILAV+ G+N V+LW+E + GQW++V
Sbjct:  137 VSVLEFR-DNSW-THQIFHAHGMGVNSISWAPAAAPGSLISSNPGPGQQRRFVTGGSDNLLKIWDYNPETKTYNNTQTLEGHSDWVRDVAWSPSV-LSKSYIASASQDKTVRIWTSDASNPGQWTSQQL-EFDTVLWRVSWSPSGNILAVSGGDNKVSLWKENLKGQWEKV 303          
BLAST of BQ623227 vs. ExPASy Swiss-Prot
Match: SEC13_ASPOR (Protein transport protein sec13 OS=Aspergillus oryzae GN=sec13 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.120e-31
Identity = 75/164 (45.73%), Postives = 108/164 (65.85%), Query Frame = 3
Query:   27 DGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK-LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWT--VAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGQWQQV 509
            D  W T +I  AH +GV S+SWAP+ +PG+L+ +      Q+   +GG DN +K+W   +     +    L+ H+DWVRDVAW+P++ L KS IASAS+D  V IWT  V+  G QW  + L +F T ++RVSWS +GNILAV+ G+N V+LW+E + GQW++V
Sbjct:  130 DNSW-THQIFHAHGMGVNSISWAPAASPGSLISANPGPGQQRRFVTGGSDNLLKIWDYNSETKSYNLSQTLEGHSDWVRDVAWSPSI-LSKSYIASASQDKTVRIWTSDVSNPG-QWASQQL-EFDTVLWRVSWSPSGNILAVSGGDNKVSLWKENLKGQWEKV 289          
BLAST of BQ623227 vs. ExPASy Swiss-Prot
Match: SEC13_ASPFU (Protein transport protein sec13 OS=Aspergillus fumigatus GN=sec13 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.120e-31
Identity = 78/171 (45.61%), Postives = 109/171 (63.74%), Query Frame = 3
Query:    3 ISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK-LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV-AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGQWQQV 509
            +SV   R D  W T +I  AH +GV S+SWAP+ +PG+L+ S      Q+   +GG DN +K+W         +    L+ H+DWVRDVAW+P++ L KS IASAS+D  V IWT  A    QW  + L +F T ++RVSWS +GNILAV+ G+N V+LW+E + GQW++V
Sbjct:  135 VSVLEFR-DNSW-THQIFHAHGMGVNSISWAPAASPGSLISSNPGPGQQRRFVTGGSDNLLKIWDYNPESKTYNLSQTLEGHSDWVRDVAWSPSI-LSKSYIASASQDKTVRIWTSDASNPGQWTSQQL-EFDTVLWRVSWSPSGNILAVSGGDNKVSLWKENLKGQWEKV 301          
BLAST of BQ623227 vs. ExPASy Swiss-Prot
Match: SEC13_ASPTN (Protein transport protein sec13 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=sec13 PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.258e-31
Identity = 74/163 (45.40%), Postives = 105/163 (64.42%), Query Frame = 3
Query:   27 DGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK-LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV-AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGQWQQV 509
            D  W T +I  AH +GV S+SWAP+ APG+L+ +      Q+   +GG DN +K+W         +    L+ H+DWVRDVAW+P++ L KS IASAS+D  V IWT  A    QW  + L +F + ++RVSWS +GNILAV+ G+N V+LW+E + GQW++V
Sbjct:  145 DNSW-THQIFHAHGMGVNSISWAPAAAPGSLISANPGPGQQRRFVTGGSDNLLKIWDYNPETKTYNLSQTLEGHSDWVRDVAWSPSI-LSKSYIASASQDKTVRIWTSDASNPGQWTSQQL-EFDSVLWRVSWSPSGNILAVSGGDNKVSLWKENLKGQWEKV 304          
BLAST of BQ623227 vs. ExPASy Swiss-Prot
Match: SEC13_PICPG (Protein transport protein SEC13 OS=Pichia pastoris (strain GS115) GN=SEC13 PE=3 SV=3)

HSP 1 Score: 134.035 bits (336), Expect = 5.557e-31
Identity = 70/166 (42.17%), Postives = 99/166 (59.64%), Query Frame = 3
Query:   27 DGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTP--VYRVSWSLTGNILAVADGNNNVTLWEEAVDGQWQQVTAV 518
            DGG     + Q H +GV + SWAP + P         D  ++  SGGCDN VK+W+  +         A Q H+DWVRDVAW+P+  L KS IA+AS+D  V+IWT   + ++WE + L   K P   +R SWSL+GN+LA++ G+N VTLW+E + G+W+    V
Sbjct:  132 DGGALEPIVIQGHAIGVNAASWAPISLP---------DNTRRFVSGGCDNLVKIWRYDDAAKTFIEEEAFQGHSDWVRDVAWSPSR-LSKSYIATASQDRTVLIWTKDGKSNKWEKQPLTKEKFPDVCWRASWSLSGNVLAISGGDNKVTLWKENIQGKWESAGEV 287          
BLAST of BQ623227 vs. ExPASy Swiss-Prot
Match: SEC13_YARLI (Protein transport protein SEC13 OS=Yarrowia lipolytica GN=SEC13 PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 7.258e-31
Identity = 75/169 (44.38%), Postives = 103/169 (60.95%), Query Frame = 3
Query:   27 DGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG--SGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQ-WEGKVLHDFKTP--VYRVSWSLTGNILAVADGNNNVTLWEEAVDGQWQQVTAV 518
            +GG   +    AH VG  S SWAP    G+L+   +G      ++ +GGCDN VK+WK             L  H DWVRDVAW+ ++ L KS IASAS+D  VI+WT  +EG+Q W+ K+L D   P  V++VSWSL+GN+LAV+ G+N VTLW+E + G+W+    V
Sbjct:  131 EGGNCEATTFAAHDVGANSASWAPPAVSGSLIQPINGKASNNIRIVTGGCDNLVKIWKYDPSSKTYVIEETLSGHKDWVRDVAWSSSV-LSKSYIASASQDKTVIVWT--QEGNQPWKKKLLQDIPFPDVVWKVSWSLSGNVLAVSGGDNKVTLWKENLTGEWESAGVV 296          
BLAST of BQ623227 vs. ExPASy Swiss-Prot
Match: SEC13_SCHPO (Protein transport protein sec13 OS=Schizosaccharomyces pombe GN=sec13 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 7.258e-31
Identity = 76/170 (44.71%), Postives = 103/170 (60.59%), Query Frame = 3
Query:    3 ISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGD-QWEGKVLHDFKTP--VYRVSWSLTGNILAVADGNNNVTLWEEAVDGQWQ 503
            +SV   + DG  DT RI  AH  G  +V W+P +  G++VG       +KL + GCDN VK+W    G+        L  H DW RDVAWAP++GL K+ +ASAS+D  V IWT  +EGD  W+   L + K P   +RVSWSL+GNILAV+ G+N V L++E+   +WQ
Sbjct:  125 VSVLEFKDDGSCDT-RIFTAHEPGCNAVCWSPPSLSGSVVGQSPAAGPKKLATAGCDNLVKIWAFDAGVNNWILEDTLAGHVDWTRDVAWAPSVGLTKTYLASASQDKNVFIWT--KEGDGPWQKTPLTEEKFPDIAWRVSWSLSGNILAVSCGDNKVYLFKES-QNKWQ 290          
BLAST of BQ623227 vs. ExPASy Swiss-Prot
Match: SEC13_COCIM (Protein transport protein SEC13 OS=Coccidioides immitis GN=SEC13 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.238e-30
Identity = 75/171 (43.86%), Postives = 107/171 (62.57%), Query Frame = 3
Query:    3 ISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSG-FLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREG-DQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGQWQQV 509
            +SV   R D  W T +I  AH +GV SVSWAP+ APG+++ +      +++  +GG DN VK+W              L+ HT WVRDV+W+P++ L +S IASAS+D  V IWT      ++W    L +F   V+RVSWSL+GNILAV+ G+N V+LW+E + GQW++V
Sbjct:  133 VSVLEFR-DNSW-THQIFHAHGMGVNSVSWAPAAAPGSVISATPSTGQIRRFVTGGSDNLVKIWDYNPETKTYATSHVLEGHTGWVRDVSWSPSI-LSRSYIASASQDKTVRIWTSDPSNPNEWTSHQL-EFDAVVWRVSWSLSGNILAVSGGDNKVSLWKENLKGQWEKV 299          
BLAST of BQ623227 vs. ExPASy Swiss-Prot
Match: SEC13_YEAST (Protein transport protein SEC13 OS=Saccharomyces cerevisiae GN=SEC13 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.513e-28
Identity = 66/161 (40.99%), Postives = 98/161 (60.87%), Query Frame = 3
Query:   27 DGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTP--VYRVSWSLTGNILAVADGNNNVTLWEEAVDGQWQ 503
            + G  +  I  AH +GV S SWAP+T       +G  +  +K  +GG DN VK+WK  +          L+ H+DWVRDVAW+P + L +S +AS S+D   IIWT   E   W+  +L + K P  ++R SWSL+GN+LA++ G+N VTLW+E ++G+W+
Sbjct:  132 ENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKES-RKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV-LLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWE 290          
The following BLAST results are available for this feature:
BLAST of BQ623227 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
SEC13_NEUCR6.565e-3246.78Protein transport protein sec-13 OS=Neurospora cra... [more]
SEC13_ASPNC8.574e-3246.20Protein transport protein sec13 OS=Aspergillus nig... [more]
SEC13_ASPOR1.120e-3145.73Protein transport protein sec13 OS=Aspergillus ory... [more]
SEC13_ASPFU1.120e-3145.61Protein transport protein sec13 OS=Aspergillus fum... [more]
SEC13_ASPTN3.258e-3145.40Protein transport protein sec13 OS=Aspergillus ter... [more]
SEC13_PICPG5.557e-3142.17Protein transport protein SEC13 OS=Pichia pastoris... [more]
SEC13_YARLI7.258e-3144.38Protein transport protein SEC13 OS=Yarrowia lipoly... [more]
SEC13_SCHPO7.258e-3144.71Protein transport protein sec13 OS=Schizosaccharom... [more]
SEC13_COCIM1.238e-3043.86Protein transport protein SEC13 OS=Coccidioides im... [more]
SEC13_YEAST1.513e-2840.99Protein transport protein SEC13 OS=Saccharomyces c... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00318 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00318 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623227 ID=BQ623227; Name=BQ623227; organism=Citrus sinensis; type=EST; length=605bp
ACATATCAGTTTTTACGGCTAGAGCTGATGGCGGCTGGGATACATCTCGG
ATTGACCAAGCTCATCCGGTTGGTGTGACTTCAGTTTCATGGGCCCCATC
AACAGCTCCCGGTGCACTTGTGGGTTCTGGTTTTCTTGACCCAGTTCAGA
AGCTTTGTTCAGGTGGTTGTGATAATACCGTGAAGGTGTGGAAGCTGTAC
AATGGAATTTGGAAGATGGACTGCTTTCCAGCTCTTCAAATGCATACTGA
TTGGGTTAGAGATGTTGCTTGGGCTCCCAACTTGGGGCTTCCAAAATCTA
CTATTGCAAGTGCATCGGAGGATGGGAAAGTTATTATATGGACTGTGGCC
AGGGAAGGAGATCAATGGGAAGGTAAGGTGTTGCATGACTTCAAGACCCC
TGTTTATAGAGTCAGCTGGTCACTGACTGGAAACATATTGGCTGTGGCTG
ATGGAAACAACAATGTAACACTGTGGGAAGAAGCAGTGGATGGGCAGTGG
CAACAGGTGACTGCAGTTGGGCCGTAAGACTCTTTTAAGTTTTTCAATTT
ATTATCATGAAATACAAGATTGCATTTTAGAACCTCTTAAAAAAAAAAAA
AAAAA
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