BQ623227

Overview
NameBQ623227
Unique NameBQ623227
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length605
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig332 contig Csv1_Contig332:488..1092. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623227 vs. ExPASy Swiss-Prot
Match: SEC13_LODEL (Protein transport protein SEC13 OS=Lodderomyces elongisporus GN=SEC13 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.371e-28
Identity = 70/168 (41.67%), Postives = 100/168 (59.52%), Query Frame = 3
Query:   27 DGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG--SGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTP--VYRVSWSLTGNILAVADGNNNVTLWEEAVDGQWQQVTAV 518
            D G  +  I  AH +GV S SWAP TA  +     +  L   ++  + G DN VK+WK    +        L+ HTDWVRDVAW+P+  L +  IA+AS+D  V+IWT  ++G +W+ + L + K P   +R SWSL+GNILAV+ G+N VTLW+E + G+W+    V
Sbjct:  135 DDGTTSHVIFDAHAIGVNSASWAPFTAASSTSSKDANTLKQHRRFVTCGSDNLVKIWKYDTALETYAEEAKLEGHTDWVRDVAWSPS-NLVRPYIATASQDCTVLIWTQDKDG-KWQSQPLTEEKFPDVCWRCSWSLSGNILAVSGGDNKVTLWKENLQGKWESAGEV 300          
BLAST of BQ623227 vs. ExPASy Swiss-Prot
Match: SEC13_KLULA (Protein transport protein SEC13 OS=Kluyveromyces lactis GN=SEC13 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.511e-28
Identity = 65/165 (39.39%), Postives = 98/165 (59.39%), Query Frame = 3
Query:   27 DGGWDTSRIDQAHPVGVTSVSWAPST----APGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTP--VYRVSWSLTGNILAVADGNNNVTLWEEAVDGQWQ 503
            + G  +  I  AH +G  +  WAP+T    +     GS     V++  +GG DN VK+WK  +          L+ H+DWVRDVAW+P + L +S +AS S+D   IIWT   + D W+  +L + K P  ++R SWSL+GNILA++ G+N VTLW+E ++G+W+
Sbjct:  132 ENGTTSPIIIDAHSIGANTACWAPATLQQQSNQGTSGSASPQQVRRFVTGGADNLVKIWKYNSDAATYLLEHTLEGHSDWVRDVAWSPTV-LSRSYLASVSQDRTCIIWTQDSKEDTWKKTLLKEDKFPDVLWRASWSLSGNILALSCGDNTVTLWKENLEGKWE 295          
BLAST of BQ623227 vs. ExPASy Swiss-Prot
Match: SC131_CANGA (Protein transport protein SEC13-1 OS=Candida glabrata GN=SEC131 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.728e-27
Identity = 65/166 (39.16%), Postives = 93/166 (56.02%), Query Frame = 3
Query:   27 DGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVL--HDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGQWQQVTAV 518
            + G  T  I  AH +GV + SWAP+T  G          V++  +GG DN VK+W+             L+ H+DWVRDVAW+P++ L +S IAS S+D    IWT       W    L   +F   ++R SWSL+GNILA++ G+N VTLW+E ++G+W+    V
Sbjct:  132 ENGTATPLIFDAHAIGVNAASWAPATVEGGNNPGEAPKEVRRFVTGGADNLVKIWRYNPETQSYLVEDTLEGHSDWVRDVAWSPSV-LLRSYIASVSQDRTCNIWTQEDNTGPWVKTQLTPEEFPDVLWRASWSLSGNILAISGGDNKVTLWKENLNGKWESAGEV 296          
BLAST of BQ623227 vs. ExPASy Swiss-Prot
Match: SEC13_PHANO (Protein transport protein SEC13 OS=Phaeosphaeria nodorum GN=SEC13 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.868e-27
Identity = 72/166 (43.37%), Postives = 96/166 (57.83%), Query Frame = 3
Query:   27 DGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGF--LDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGQWQQVTAV 518
            D  W +  I QA   GV SVSWAP+ APG +V +        ++  +GG D  VK+W              L  HTDWVRDVAW+P + L KS IASAS+D  V IWT +   D W+  VL+      +RVSWSL+GN+LAV+ G+N V+LW+E + G W+ V  +
Sbjct:  139 DNAW-SHVIFQACGSGVNSVSWAPAVAPGQVVSASGNQAGAARRFVTGGSDCQVKLWDFSAETGSWQSTQILTGHTDWVRDVAWSPTV-LSKSYIASASQDKTVRIWTSSDLRD-WKSTVLN-VDAVAWRVSWSLSGNVLAVSTGDNRVSLWKERLSGGWECVKTI 300          
BLAST of BQ623227 vs. ExPASy Swiss-Prot
Match: SEC13_CANAL (Protein transport protein SEC13 OS=Candida albicans GN=SEC13 PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 8.304e-27
Identity = 69/168 (41.07%), Postives = 101/168 (60.12%), Query Frame = 3
Query:   27 DGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKL--YNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTP--VYRVSWSLTGNILAVADGNNNVTLWEEAVDGQWQQVTAV 518
            D G  +  I  AH +G  S +WAP +       S  L   +++ S G DN  K+WK    N  +  +    L+ HTDWVRDVAW+P+  L +S IA+AS+D  V+IWT  R+G +W+ ++L + K P   +R SWSL+GNILAV+ G+N V+LW+E + G+W+    V
Sbjct:  135 DDGTTSHVIFDAHAIGANSATWAPVSTSSK--DSAALKQQRRIVSCGSDNLAKIWKYDAANNTYVEEA--KLEGHTDWVRDVAWSPS-NLIRSYIATASQDRTVLIWTQDRDG-KWQKQLLTEEKFPDVCWRCSWSLSGNILAVSGGDNKVSLWKENLQGKWESAGEV 296          
BLAST of BQ623227 vs. ExPASy Swiss-Prot
Match: SEC13_ASHGO (Protein transport protein SEC13 OS=Ashbya gossypii GN=SEC13 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 8.304e-27
Identity = 63/166 (37.95%), Postives = 95/166 (57.23%), Query Frame = 3
Query:   27 DGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTP--VYRVSWSLTGNILAVADGNNNVTLWEEAVDGQWQQVTAV 518
            + G  +  I  AH +GV +  WAP+T       S  L   +++ +GG DN VK+WK             L  H DWVRDVAW+P++ LP++ +A+ S+D   IIWT       W   +L + K P  ++R SWSL+GNILA++ G+N VTLW+E ++G+W+    +
Sbjct:  132 ENGTTSPIIIDAHAIGVNAACWAPATIEDDGQQSQHL---RRIATGGADNLVKIWKYNPEANTYLLEDTLAAHADWVRDVAWSPSV-LPRAYLATVSQDRTCIIWTQENNQGPWTKTLLKEDKFPDVLWRASWSLSGNILALSGGDNKVTLWKENLEGKWESAAEI 293          
BLAST of BQ623227 vs. ExPASy Swiss-Prot
Match: SEC13_PICGU (Protein transport protein SEC13 OS=Pichia guilliermondii GN=SEC13 PE=3 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 4.121e-26
Identity = 68/166 (40.96%), Postives = 93/166 (56.02%), Query Frame = 3
Query:   27 DGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHD--FKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGQWQQVTAV 518
            D G  T  I +AH +GV S SWAP              PV++  +GG DN  KVW L            L+ HTDWVRDV W+P+  L +S IA+AS+D  V+IW    EG +W+ + L +  F    +R SWS +GNILAV+ G+N V+LW+E + G+W+    V
Sbjct:  134 DDGTSTHIIFEAHKIGVNSASWAPVDTKS---------PVRRFVTGGSDNLAKVWSLDASKSTYVEEAKLEGHTDWVRDVCWSPS-ALVRSYIATASQDRTVLIWHQDGEG-KWQKQKLTEELFPDVCWRCSWSFSGNILAVSGGDNKVSLWKENLQGKWESAGEV 288          
BLAST of BQ623227 vs. ExPASy Swiss-Prot
Match: SEC13_PICST (Protein transport protein SEC13 OS=Pichia stipitis GN=SEC13 PE=3 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.199e-25
Identity = 67/170 (39.41%), Postives = 101/170 (59.41%), Query Frame = 3
Query:   27 DGGWDTSRIDQAHPVGVTSVSWAP--STAPGALVGSGFLDPVQKLCSGGCDNTVKVWKL--YNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTP--VYRVSWSLTGNILAVADGNNNVTLWEEAVDGQWQQVTAV 518
            D G  +  +  AH +G  S SWAP  ST       +  L   ++  + G DN  K+WK    N  +  +    L+ HTDWVRDVAW+P++ L ++ IA+AS+D  V+IWT  + G +W+ ++L + K P   +R SWSL+GNILAV+ G+N V+LW+E + G+W+    V
Sbjct:  135 DDGTTSHVVFDAHAIGANSASWAPLSSTPSPNQKDAASLKQQRRFVTCGSDNLAKIWKYDAANNTYVEEA--RLEGHTDWVRDVAWSPSM-LVRTYIATASQDRTVLIWTQDKAG-KWQKQLLTEDKFPDVCWRCSWSLSGNILAVSGGDNKVSLWKENLQGKWESAGEV 300          
BLAST of BQ623227 vs. ExPASy Swiss-Prot
Match: SEC13_CRYNE (Protein transport protein SEC13 OS=Cryptococcus neoformans GN=SEC13 PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 7.772e-25
Identity = 69/185 (37.30%), Postives = 96/185 (51.89%), Query Frame = 3
Query:    3 ISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS---TAPGALVG---SGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVL---------HDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGQWQQVT 512
            +SV + + DG  + + I  AH  G  ++SWAPS   T  G       S  L P ++  + G DN +++W       K      ++ H DWVRDVAWAPN+GLP   IASAS+D  V+I +       W    L           F   V+RVSWSL GN+LAV+ G+  V+LW+E V   W+ V+
Sbjct:  152 VSVLSFQNDGSIEVN-IFPAHGTGANAISWAPSVLSTVSGVSRSQQPSNSLAPQKRFVTAGSDNLIRIWGFDEEQKKWTEEETIKGHEDWVRDVAWAPNIGLPGMYIASASQDRTVLIHSRPSPSSSWTSAPLLPSLPQSQDPHFPDAVWRVSWSLAGNVLAVSCGDGKVSLWKEGVGKGWECVS 335          
BLAST of BQ623227 vs. ExPASy Swiss-Prot
Match: SEC13_DEBHA (Protein transport protein SEC13 OS=Debaryomyces hansenii GN=SEC13 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.732e-24
Identity = 65/169 (38.46%), Postives = 97/169 (57.40%), Query Frame = 3
Query:   27 DGGWDTSRIDQAHPVGVTSVSWAP---STAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHD--FKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGQWQQVTAV 518
            D G  +  I  AH +GV S SWAP   +   G    S     +++  + G DN  K+WK  +          L+ HTDWVRDV W+P++ L +S IA+AS+D  V+IW+    G +W+ ++L +  F    +R SWSL+GNILAV+ G+N V+LW+E + G+W+    V
Sbjct:  135 DDGTTSHIIFDAHAIGVNSASWAPLSNNNTKGKDTNS-----IRRFVTCGSDNLAKIWKFDSSKNAYIEEAVLEGHTDWVRDVCWSPSI-LIRSYIATASQDRTVLIWSQDNNG-KWQKQLLTEEMFPDVCWRCSWSLSGNILAVSGGDNKVSLWKENLQGKWESAGEV 296          
The following BLAST results are available for this feature:
BLAST of BQ623227 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
SEC13_LODEL3.371e-2841.67Protein transport protein SEC13 OS=Lodderomyces el... [more]
SEC13_KLULA7.511e-2839.39Protein transport protein SEC13 OS=Kluyveromyces l... [more]
SC131_CANGA3.728e-2739.16Protein transport protein SEC13-1 OS=Candida glabr... [more]
SEC13_PHANO4.868e-2743.37Protein transport protein SEC13 OS=Phaeosphaeria n... [more]
SEC13_CANAL8.304e-2741.07Protein transport protein SEC13 OS=Candida albican... [more]
SEC13_ASHGO8.304e-2737.95Protein transport protein SEC13 OS=Ashbya gossypii... [more]
SEC13_PICGU4.121e-2640.96Protein transport protein SEC13 OS=Pichia guillier... [more]
SEC13_PICST1.199e-2539.41Protein transport protein SEC13 OS=Pichia stipitis... [more]
SEC13_CRYNE7.772e-2537.30Protein transport protein SEC13 OS=Cryptococcus ne... [more]
SEC13_DEBHA1.732e-2438.46Protein transport protein SEC13 OS=Debaryomyces ha... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00318 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00318 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623227 ID=BQ623227; Name=BQ623227; organism=Citrus sinensis; type=EST; length=605bp
ACATATCAGTTTTTACGGCTAGAGCTGATGGCGGCTGGGATACATCTCGG
ATTGACCAAGCTCATCCGGTTGGTGTGACTTCAGTTTCATGGGCCCCATC
AACAGCTCCCGGTGCACTTGTGGGTTCTGGTTTTCTTGACCCAGTTCAGA
AGCTTTGTTCAGGTGGTTGTGATAATACCGTGAAGGTGTGGAAGCTGTAC
AATGGAATTTGGAAGATGGACTGCTTTCCAGCTCTTCAAATGCATACTGA
TTGGGTTAGAGATGTTGCTTGGGCTCCCAACTTGGGGCTTCCAAAATCTA
CTATTGCAAGTGCATCGGAGGATGGGAAAGTTATTATATGGACTGTGGCC
AGGGAAGGAGATCAATGGGAAGGTAAGGTGTTGCATGACTTCAAGACCCC
TGTTTATAGAGTCAGCTGGTCACTGACTGGAAACATATTGGCTGTGGCTG
ATGGAAACAACAATGTAACACTGTGGGAAGAAGCAGTGGATGGGCAGTGG
CAACAGGTGACTGCAGTTGGGCCGTAAGACTCTTTTAAGTTTTTCAATTT
ATTATCATGAAATACAAGATTGCATTTTAGAACCTCTTAAAAAAAAAAAA
AAAAA
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