BQ623231

Overview
NameBQ623231
Unique NameBQ623231
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL19_ARATH (Putative germin-like protein subfamily 1 member 9 OS=Arabidopsis thaliana GN=At5g38910 PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.276e-66
Identity = 125/190 (65.79%), Postives = 143/190 (75.26%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKFI 575
            CV +N P DGVFVNGKFCKDPKL   EDFF +GL +      + G +VT  NV  +PGLNTLGIS VRIDY  YGQNPPHTHPRA+E+L V  GTL+VGFVTSN   N L +K L +GDVFVFP G+IHFQ N+GK  AVAFA L SQ PGVITIADTVFG++P I+P FL  AFQ+DP +V DLQ KFI
Sbjct:   32 CVGVNTPADGVFVNGKFCKDPKLVTVEDFFFTGLHEARPPNPKTGSNVTAVNVNNLPGLNTLGISLVRIDYGVYGQNPPHTHPRASEVLYVAVGTLFVGFVTSNP-ENRLFSKTLYEGDVFVFPQGLIHFQVNVGKYPAVAFAGLSSQNPGVITIADTVFGSNPQIDPSFLASAFQVDPKIVMDLQTKFI 220          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL111_ARATH (Germin-like protein subfamily 1 member 11 OS=Arabidopsis thaliana GN=At5g38940 PE=2 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 4.848e-66
Identity = 130/189 (68.78%), Postives = 146/189 (77.25%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKF 572
            CV+ N   +GVFVNGKFCKDPKL  A+DFF SGL       + +G +VT  NV  + GLNTLGIS VRIDYA  GQNPPHTHPRATEILVV +GTL VGFVTSN  +N L +KVLN+GDVFVFP G+IHFQ NIGK  AVAFA+L SQ PGVITIA+TVFGA+P INP  L KAFQL+P VV DLQ KF
Sbjct:   34 CVSANTSANGVFVNGKFCKDPKLVTADDFFFSGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVNGQNPPHTHPRATEILVVEQGTLLVGFVTSNP-DNRLFSKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVITIANTVFGANPAINPTILAKAFQLNPRVVMDLQTKF 221          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL112_ARATH (Putative germin-like protein subfamily 1 member 12 OS=Arabidopsis thaliana GN=At5g38960 PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.842e-65
Identity = 126/190 (66.32%), Postives = 146/190 (76.84%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNT-ANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKF 572
            C+ +N P + +FVNGKFCKDPKL  A+DF+ SGLDK   T ++ +G +VT  NV QIPGLNTLGIS VRIDY   GQNPPHTHPRATEIL+V EGTL+VGF +S    N L  K LNKGDVFVFP G+IHFQ NIGK  AVAFASL SQ PGVI I +T+FG+ PPI+P+ L KAFQLDP V+  LQKKF
Sbjct:   34 CIGVNTPANALFVNGKFCKDPKLVTADDFYFSGLDKARTTESSPVGSNVTTVNVNQIPGLNTLGISLVRIDYGINGQNPPHTHPRATEILLVQEGTLFVGFFSSFP-ENRLFNKTLNKGDVFVFPEGLIHFQVNIGKQPAVAFASLSSQNPGVIIIGNTLFGSKPPIDPNVLAKAFQLDPKVIIQLQKKF 222          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL110_ARATH (Germin-like protein subfamily 1 member 10 OS=Arabidopsis thaliana GN=At5g38930 PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 5.360e-65
Identity = 129/189 (68.25%), Postives = 143/189 (75.66%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKF 572
            CV+ N   +GVFVNGKFCKDPKL  A+DFF  GL       + +G +VT  NV  + GLNTLGIS VRIDYA  GQNPPHTHPRATEILVV  GTL VGFVTSN  +N L  KVLN+GDVFVFP G+IHFQ NIGK  AVAFA+L SQ PGVITIA TVFGA+P INP+ L KAFQ+DP VV DLQ KF
Sbjct:   34 CVSANSSANGVFVNGKFCKDPKLVTADDFFFPGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVDGQNPPHTHPRATEILVVELGTLLVGFVTSNP-DNRLFTKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVITIAPTVFGANPAINPNILAKAFQVDPRVVMDLQTKF 221          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL12_ARATH (Putative germin-like protein subfamily 1 member 2 OS=Arabidopsis thaliana GN=At3g04150 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.366e-60
Identity = 115/189 (60.85%), Postives = 143/189 (75.66%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKF 572
            CVA N   + VFVNGKFCKDPKL  A DFF SGL+ PGNT+NRLG SVT+ +V +IPGLNTLGI+  R+D+AP GQ PPH HPRA++I++VL+G L VGFV+SN  N TL +K+L  GDVF FPIG++ F  N GKT+AVA   +GSQ PGVI I D VFG++P I+P  L KAF LD N+V+ +Q+ F
Sbjct:   34 CVATNGT-NRVFVNGKFCKDPKLVTANDFFYSGLNIPGNTSNRLGASVTDVDVRRIPGLNTLGIAIARLDFAPGGQLPPHIHPRASQIILVLKGQLSVGFVSSNDYNYTLFSKILYPGDVFAFPIGLVQFHANTGKTHAVAIGVVGSQDPGVIPIGDAVFGSNPLIDPKLLAKAFALDVNIVRHVQRVF 221          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL23_ORYSJ (Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica GN=Os02g0491800 PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.157e-59
Identity = 119/190 (62.63%), Postives = 137/190 (72.11%), Query Frame = 3
Query:    3 ICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKF 572
            +CVA  D    V VNG  CKD +   AEDFF SGL   GNT N+ G +VT  NV Q+PGLNTLGIS  RIDYA +G NPPHTHPRATEIL VLEG+LYVGFVTSN   N L  KV+NKGDVFVFP G++HFQFN G T+AVA  +L SQ PGVIT+A+ VFG+ P I  D L KAFQ++  VV  +Q KF
Sbjct:   37 LCVA--DKASTVRVNGVACKDGEDVAAEDFFFSGLHMAGNTTNKQGSAVTAVNVAQVPGLNTLGISLARIDYALHGLNPPHTHPRATEILTVLEGSLYVGFVTSNP-ENKLFTKVINKGDVFVFPKGLVHFQFNYGTTDAVAIVALSSQNPGVITVANAVFGSKPSITDDILAKAFQVEKTVVDQIQAKF 223          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL21_ORYSJ (Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600 PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.511e-59
Identity = 118/189 (62.43%), Postives = 135/189 (71.43%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKF 572
            CVA  D    V VNG  CKDP     EDFF SGL   GNT+NR G +VT  NV QI GLNTLGIS  R+DYAPYG NPPH HPRATEIL +LEG+LYVGFVTSN   N L  KVLNKGDVFVFP G+IHFQFN G  + +A A+L SQ PGVITIA+ VFG+ P I+ D L KAFQ++  +V  +Q +F
Sbjct:   31 CVA--DKMSQVLVNGFACKDPAAITVEDFFFSGLHMAGNTSNRQGSAVTGVNVAQISGLNTLGISLARVDYAPYGLNPPHIHPRATEILTILEGSLYVGFVTSNP-ENKLFTKVLNKGDVFVFPQGLIHFQFNYGTKDVIALAALSSQNPGVITIANAVFGSKPFISDDILAKAFQVEKKIVDRIQAQF 216          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL13_ARATH (Germin-like protein subfamily 1 member 3 OS=Arabidopsis thaliana GN=At3g04170 PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.279e-58
Identity = 113/189 (59.79%), Postives = 141/189 (74.60%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKF 572
            CVA+ + K+GVFVNG+FCKDPKL  ++DFF SGL+ PGNT  RLG  V  AN   IPGLNTLG+   RID+AP G  PPH HPRA+EI++V++G L VGFV+SN  N TL +K+L  GDVFV PIG++ F  NIGKTNAVA  ++GSQ PG I++ D VFG+ PPI+P  L KAF LD N+V+ L+K F
Sbjct:   34 CVAVPE-KNGVFVNGEFCKDPKLVTSDDFFASGLNIPGNTNKRLGSFVNPAN---IPGLNTLGVGIARIDFAPGGLIPPHIHPRASEIILVIKGKLLVGFVSSNDYNYTLFSKILYPGDVFVHPIGLVQFHANIGKTNAVAIGAVGSQNPGYISVGDAVFGSKPPIDPKILAKAFALDINIVRYLRKVF 218          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL22_ORYSJ (Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica GN=Os02g0491700 PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 2.849e-58
Identity = 115/184 (62.50%), Postives = 132/184 (71.74%), Query Frame = 3
Query:   21 DPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKF 572
            D    V VNG  CKD K   A DFF SGL   GNT N+ G +VT  NV QIPGLNT+G+S VRIDYAP G NPPHTHPRATEI  VLEG+LYVGFV SN   N L  KVLNKGDVFVFP G++HFQFN G  NAVA A+L SQ PGVIT+ + VFG+ P I+ D L KAFQ+D N++  +Q +F
Sbjct:   41 DKMSQVRVNGFPCKDAKDVVAGDFFFSGLHMAGNTTNKQGSNVTTVNVAQIPGLNTMGVSLVRIDYAPNGLNPPHTHPRATEIPTVLEGSLYVGFVISNP-ENKLFTKVLNKGDVFVFPQGLVHFQFNNGTNNAVALAALSSQNPGVITVGNAVFGSKPSISDDILAKAFQVDKNIIDRIQAQF 223          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL16_ARATH (Germin-like protein subfamily 1 member 6 OS=Arabidopsis thaliana GN=At3g04200 PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 4.859e-58
Identity = 116/189 (61.38%), Postives = 137/189 (72.49%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKF 572
            CVA ++  + VFVNGKFCKDPK   A DF  SGL+   NT N LG +VT  +V +IPGLNTLG+S  R+D+A  GQNPPH HPRATEILVV +G L VGFV+SNQ NN L  KVL +GDVFVFPIG+IHFQ N+ +T AVAFA  GSQ PG I IAD VFG++P I  + L KAFQLD  +V+ L   F
Sbjct:   35 CVAASET-NRVFVNGKFCKDPKSVTANDFSYSGLNIARNTTNFLGSNVTTVDVNKIPGLNTLGVSLARLDFAQGGQNPPHIHPRATEILVVTKGKLLVGFVSSNQDNNRLFYKVLKRGDVFVFPIGLIHFQMNVRRTRAVAFAGFGSQNPGTIRIADAVFGSNPSIPQEVLAKAFQLDVKLVRFLHIVF 222          
The following BLAST results are available for this feature:
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
GL19_ARATH1.276e-6665.79Putative germin-like protein subfamily 1 member 9 ... [more]
GL111_ARATH4.848e-6668.78Germin-like protein subfamily 1 member 11 OS=Arabi... [more]
GL112_ARATH1.842e-6566.32Putative germin-like protein subfamily 1 member 12... [more]
GL110_ARATH5.360e-6568.25Germin-like protein subfamily 1 member 10 OS=Arabi... [more]
GL12_ARATH1.366e-6060.85Putative germin-like protein subfamily 1 member 2 ... [more]
GL23_ORYSJ1.157e-5962.63Putative germin-like protein 2-3 OS=Oryza sativa s... [more]
GL21_ORYSJ1.511e-5962.43Putative germin-like protein 2-1 OS=Oryza sativa s... [more]
GL13_ARATH1.279e-5859.79Germin-like protein subfamily 1 member 3 OS=Arabid... [more]
GL22_ORYSJ2.849e-5862.50Putative germin-like protein 2-2 OS=Oryza sativa s... [more]
GL16_ARATH4.859e-5861.38Germin-like protein subfamily 1 member 6 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00322 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00322 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623231 ID=BQ623231; Name=BQ623231; organism=Citrus sinensis; type=EST; length=667bp
ATATCTGTGTCGCCATCAATGATCCCAAGGATGGTGTGTTTGTGAATGGG
AAGTTCTGCAAGGACCCCAAGCTTGCGAAAGCAGAAGATTTCTTTTTATC
AGGGCTAGACAAGCCTGGAAACACAGCAAATCGACTTGGCTTTAGTGTGA
CAAATGCAAATGTTGAGCAAATTCCAGGACTTAACACTCTTGGCATATCA
GCAGTCCGTATTGACTACGCGCCATACGGTCAAAATCCACCTCACACTCA
CCCCCGTGCCACTGAAATCCTGGTGGTCCTGGAAGGAACTCTTTATGTTG
GTTTTGTGACATCGAACCAACTAAATAACACACTCATCGCAAAAGTTCTG
AACAAGGGAGACGTTTTTGTGTTTCCAATTGGTATGATTCACTTCCAATT
CAACATTGGAAAAACAAATGCAGTTGCGTTTGCCAGTTTGGGCAGCCAGT
TCCCTGGTGTCATTACCATAGCCGACACGGTCTTCGGAGCCGATCCTCCA
ATCAATCCCGATTTTCTTGGCAAGGCATTCCAGTTGGACCCAAACGTTGT
GAAAGATCTTCAGAAGAAGTTCATTAATGGCAATTAGGAGAACAGAATGA
GCTTTCCGGTGGCTTTACTATTTTTCCTCCATTATATCATATCGGGTTGT
AATAAAAGAGGTCTCTT
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