BQ623231

Overview
NameBQ623231
Unique NameBQ623231
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL82_ORYSJ (Germin-like protein 8-2 OS=Oryza sativa subsp. japonica GN=GER3 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.197e-56
Identity = 120/192 (62.50%), Postives = 144/192 (75.00%), Query Frame = 3
Query:    6 CVA-INDPKDGVFVNGKFCKDPKLAKAEDFFLSG-LDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTN-AVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKF 572
            CVA +N P   V VNG  CK+P  A A+DFF +  LDKP +T N++G +VT  NV Q+PGLNTLGIS  R+D+AP G NPPHTHPRATEI  VLEGTLYVGFVTSN  +N L++KVLNKGDVFVFP G+IHFQFN      AVA A+L SQ PGVITIA+ VFG++PPI+ D L KAFQ+D  ++  LQ +F
Sbjct:   34 CVADLNSP---VRVNGFVCKNPMNASADDFFKAAMLDKPRDTNNKVGSNVTLVNVLQLPGLNTLGISIARLDFAPLGLNPPHTHPRATEIFTVLEGTLYVGFVTSNP-DNRLLSKVLNKGDVFVFPEGLIHFQFNPNPHKPAVAIAALSSQNPGVITIANAVFGSNPPISDDILMKAFQVDKKIIDLLQAQF 221          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL87_ORYSJ (Germin-like protein 8-7 OS=Oryza sativa subsp. japonica GN=GER6 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.042e-56
Identity = 122/195 (62.56%), Postives = 138/195 (70.77%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSG-LDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTN-AVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKFINGN 584
            CVA  D    V VNG  C DPK   A+ FF +  LD P  T N++G +VT  NV QIPGLNTLGIS  RIDYAP G+NPPHTHPRATEIL VLEGTLYVGFVTSN  NNTL +KVLNKGDVFVFP G+IHFQFN      AVA A+L SQ PG ITIA+ VFG+ PPI+ D L KAFQ++   +  LQ +F   N
Sbjct:   33 CVA--DKHSPVLVNGFACLDPKYVNADHFFKAAMLDTPRKT-NKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNP-NNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVALAALSSQNPGAITIANAVFGSKPPISDDILAKAFQVEKGTIDWLQAQFWENN 223          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL89_ORYSJ (Germin-like protein 8-9 OS=Oryza sativa subsp. japonica GN=Os08g0189850 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 2.666e-56
Identity = 122/195 (62.56%), Postives = 139/195 (71.28%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSG-LDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTN-AVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKFINGN 584
            CVA  D    V VNG  C DPK   A+ FF +  LD P  T N++G +VT  NV QIPGLNTLGIS  RIDYAP GQNPPHTHPRATEIL VLEGTL+VGFVTSN  NNTL +KVLNKGDVFVFP+G+IHFQFN      AVA A+L SQ PGVITIA+ VFG+ PPI+ + L KAFQ+    +  LQ +F   N
Sbjct:   32 CVA--DKHSPVLVNGFACLDPKYVTADHFFKAAMLDTPRKT-NKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLHVGFVTSNP-NNTLFSKVLNKGDVFVFPVGLIHFQFNPNPHQPAVAIAALSSQNPGVITIANAVFGSKPPISDEVLAKAFQVGKGTIDWLQAQFWENN 222          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL86_ORYSJ (Germin-like protein 8-6 OS=Oryza sativa subsp. japonica GN=Os08g0189500 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 5.940e-56
Identity = 121/195 (62.05%), Postives = 138/195 (70.77%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSG-LDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTN-AVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKFINGN 584
            CVA  D    V VNG  C DPK   A+ FF +  LD P  T N++G +VT  NV QIPGLNTLGIS  RIDYAP GQNPPHTHPRATEIL VLEGTLYVGFVTSN  NNTL +KVL KGDVFVFP+G+IHFQFN      AVA A+L SQ PG ITIA+ VFG+ PPI+ + L KAFQ++   +  LQ +F   N
Sbjct:   33 CVA--DEHSPVLVNGFACLDPKHVNADHFFKAAMLDTPRKT-NKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNP-NNTLFSKVLKKGDVFVFPVGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDEVLAKAFQVEKGTIDWLQAQFWENN 223          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL15_ARATH (Germin-like protein subfamily 1 member 5 OS=Arabidopsis thaliana GN=At3g04190 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.323e-55
Identity = 109/189 (57.67%), Postives = 134/189 (70.90%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKF 572
            CVA N+  +GV+VNGKFCKDPK   A DF+ SGL+ PGNT+   G  +T  +V+++PGLNTLG+   RID+AP G  PPHTHPR +EI +V++G L+VGFV+SN+ N TL  KVL  GDVFVFP G+I F  NIGKTNAV  A+ GSQ PG I I + VFG+ P I+P  L KAF LD N VK  Q  F
Sbjct:   34 CVATNET-NGVYVNGKFCKDPKCVTANDFYTSGLNVPGNTSTGPGVKITVVDVKRMPGLNTLGVDIARIDFAPGGLYPPHTHPRGSEIFLVMKGKLFVGFVSSNEYNYTLFTKVLYPGDVFVFPKGLIQFHANIGKTNAVVIAATGSQNPGRIIIGNAVFGSKPLIDPKVLAKAFALDFNKVKYFQAVF 221          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL88_ORYSJ (Germin-like protein 8-8 OS=Oryza sativa subsp. japonica GN=Os08g0189700 PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.257e-55
Identity = 121/195 (62.05%), Postives = 137/195 (70.26%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSG-LDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTN-AVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKFINGN 584
            CVA  D    V VNG  C DPK   A+ FF +  LD P  T N++G +VT  NV QIPGLNTLGIS  RIDYAP G+NPPHTHPRATEIL VLEGTLYVGFVTSN  NNTL +KVLNKGDVFVFP G+IHFQFN      AVA A+L SQ PG ITIA+ VFG+ PPI+   L KAFQ++   +  LQ +F   N
Sbjct:   32 CVA--DKHSPVLVNGFACLDPKYVTADHFFKAAMLDTPRKT-NKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNP-NNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDKVLAKAFQVEKGTIDWLQAQFWENN 222          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL810_ORYSJ (Germin-like protein 8-10 OS=Oryza sativa subsp. japonica GN=GLP2 PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 3.850e-55
Identity = 121/195 (62.05%), Postives = 137/195 (70.26%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSG-LDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTN-AVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKFINGN 584
            CVA  D    V VNG  C DPK   A+ FF +  LD P  T N++G +VT  NV QIPGLNTLGIS  RIDYAP G+NPPHTHPRATEIL VLEGTLYVGFVTSN  NNTL +KVLNKGDVFVFP G+IHFQFN      AVA A+L SQ PG ITIA+ VFG+ PPI+   L KAFQ++   +  LQ +F   N
Sbjct:   32 CVA--DMHSPVLVNGFACLDPKYVNADHFFKAAMLDTPRKT-NKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNP-NNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDIVLAKAFQVEKGTIDWLQAQFWENN 222          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL41_ORYSJ (Germin-like protein 4-1 OS=Oryza sativa subsp. japonica GN=Os04g0617900 PE=2 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 6.567e-55
Identity = 117/192 (60.94%), Postives = 131/192 (68.23%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFL-SGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQL--NNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKF 572
            CVA  D    VFVNG  CK+PK   A DFFL   L  PGNT N  G +VT   V ++PGLNTLGIS  RID+AP GQNPPHTHPRATEIL VL+GTL VGFVTSNQ    N    K+L  GDVFVFP G+IHFQ N G   AVA A+L SQ PGVITIA+ VFG+ PPI  D L KAF +D + V  +Q KF
Sbjct:   37 CVA--DKLSAVFVNGFVCKNPKQVTANDFFLPKALGVPGNTVNAQGSAVTPVTVNELPGLNTLGISFARIDFAPNGQNPPHTHPRATEILTVLQGTLLVGFVTSNQPGGGNLQFTKLLGPGDVFVFPQGLIHFQLNNGAVPAVAIAALSSQNPGVITIANAVFGSTPPILDDVLAKAFMIDKDQVDWIQAKF 226          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GLP1_MESCR (Germin-like protein OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.463e-54
Identity = 103/165 (62.42%), Postives = 118/165 (71.52%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLN--NTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGAD 494
            CV +N P DG+FVNG FCKDP     +DF   GL+ P NT N LGF+ T      +PGLNTLGIS  R+D+AP+G NPPHTHPRATE+ VVLEGT YVGFVTSN  +  N L AKVLNKGDVFVFP G+IHFQ NIG    V  + L SQ PGVITIA+ VFG +
Sbjct:   32 CVGVNKPNDGLFVNGLFCKDPMEVNPDDFLFRGLNMPANTDNALGFAATLVTAANLPGLNTLGISVARLDFAPHGLNPPHTHPRATEVFVVLEGTFYVGFVTSNLADGGNKLFAKVLNKGDVFVFPQGLIHFQLNIGNYPGVGISGLSSQNPGVITIANAVFGPE 196          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL811_ORYSJ (Germin-like protein 8-11 OS=Oryza sativa subsp. japonica GN=Os08g0190100 PE=1 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.463e-54
Identity = 119/195 (61.03%), Postives = 137/195 (70.26%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSG-LDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTN-AVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKFINGN 584
            CVA  D    V VNG  C +PK   A+ FF +  LD P  T N++G +VT  NV QIPGLNTLGIS  RIDYAP GQNPPHTHPRATEIL VLEGTLYVGFVTSN  +N   +KVLNKGDVFVFP+G+IHFQFN      AVA A+L SQ PG ITIA+ VFG+ PPI+ D L KAFQ++   +  LQ +F   N
Sbjct:   32 CVA--DMHSPVLVNGFACLNPKDVNADHFFKAAMLDTPRKT-NKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNP-DNKFFSKVLNKGDVFVFPVGLIHFQFNPNPYKPAVAIAALSSQNPGAITIANAVFGSKPPISDDVLAKAFQVEKGTIDWLQAQFWENN 222          
The following BLAST results are available for this feature:
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
GL82_ORYSJ1.197e-5662.50Germin-like protein 8-2 OS=Oryza sativa subsp. jap... [more]
GL87_ORYSJ2.042e-5662.56Germin-like protein 8-7 OS=Oryza sativa subsp. jap... [more]
GL89_ORYSJ2.666e-5662.56Germin-like protein 8-9 OS=Oryza sativa subsp. jap... [more]
GL86_ORYSJ5.940e-5662.05Germin-like protein 8-6 OS=Oryza sativa subsp. jap... [more]
GL15_ARATH1.323e-5557.67Germin-like protein subfamily 1 member 5 OS=Arabid... [more]
GL88_ORYSJ2.257e-5562.05Germin-like protein 8-8 OS=Oryza sativa subsp. jap... [more]
GL810_ORYSJ3.850e-5562.05Germin-like protein 8-10 OS=Oryza sativa subsp. ja... [more]
GL41_ORYSJ6.567e-5560.94Germin-like protein 4-1 OS=Oryza sativa subsp. jap... [more]
GLP1_MESCR1.463e-5462.42Germin-like protein OS=Mesembryanthemum crystallin... [more]
GL811_ORYSJ1.463e-5461.03Germin-like protein 8-11 OS=Oryza sativa subsp. ja... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00322 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00322 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623231 ID=BQ623231; Name=BQ623231; organism=Citrus sinensis; type=EST; length=667bp
ATATCTGTGTCGCCATCAATGATCCCAAGGATGGTGTGTTTGTGAATGGG
AAGTTCTGCAAGGACCCCAAGCTTGCGAAAGCAGAAGATTTCTTTTTATC
AGGGCTAGACAAGCCTGGAAACACAGCAAATCGACTTGGCTTTAGTGTGA
CAAATGCAAATGTTGAGCAAATTCCAGGACTTAACACTCTTGGCATATCA
GCAGTCCGTATTGACTACGCGCCATACGGTCAAAATCCACCTCACACTCA
CCCCCGTGCCACTGAAATCCTGGTGGTCCTGGAAGGAACTCTTTATGTTG
GTTTTGTGACATCGAACCAACTAAATAACACACTCATCGCAAAAGTTCTG
AACAAGGGAGACGTTTTTGTGTTTCCAATTGGTATGATTCACTTCCAATT
CAACATTGGAAAAACAAATGCAGTTGCGTTTGCCAGTTTGGGCAGCCAGT
TCCCTGGTGTCATTACCATAGCCGACACGGTCTTCGGAGCCGATCCTCCA
ATCAATCCCGATTTTCTTGGCAAGGCATTCCAGTTGGACCCAAACGTTGT
GAAAGATCTTCAGAAGAAGTTCATTAATGGCAATTAGGAGAACAGAATGA
GCTTTCCGGTGGCTTTACTATTTTTCCTCCATTATATCATATCGGGTTGT
AATAAAAGAGGTCTCTT
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