BQ623231

Overview
NameBQ623231
Unique NameBQ623231
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL121_ORYSJ (Germin-like protein 12-1 OS=Oryza sativa subsp. japonica GN=Os12g0154700 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.496e-54
Identity = 121/198 (61.11%), Postives = 137/198 (69.19%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFL-SGLDKPGNTA-NRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLN--NTLIAKVLNKGDVFVFPIGMIHFQFNIGKTN-AVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKFINGN 584
            CVA  D    V VNG  CKD K    +DFFL + LDKP +T  ++ G +VT  NV ++ GLNTLGIS  RIDYAP GQNPPHTHPRATEIL V EGTLYVGFVTSNQ N  N L  K LNKGDVFVFP G+IHFQFN      AVA A+L SQ PG ITIA+ VFG++PPI+ D L KAFQ+D   V  LQ +F   N
Sbjct:   32 CVA--DRNSPVRVNGFPCKDAKDVNVDDFFLEANLDKPMDTTKSKAGSNVTLINVMKLTGLNTLGISMARIDYAPKGQNPPHTHPRATEILTVFEGTLYVGFVTSNQANGENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAITIANAVFGSNPPISDDVLAKAFQVDKKAVDWLQAQFWENN 227          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL85_ORYSJ (Germin-like protein 8-5 OS=Oryza sativa subsp. japonica GN=Os08g0189400 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.259e-54
Identity = 120/195 (61.54%), Postives = 137/195 (70.26%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSG-LDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTN-AVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKFINGN 584
            CVA  D    V VNG  C +P    A+ FF +  LD P  T N++G +VT  NV QIPGLNTLGIS  RIDYAP GQNPPHTHPRATEIL VLEGTLYVGFVTSN  NNTL +KVLNKGDVFVFP G+IHFQFN      AVA A+L SQ PG ITIA+ VFG+ PPI+ + L KAFQ++   +  LQ +F   N
Sbjct:   32 CVA--DMHSPVRVNGFACLNPMEVNADHFFKAAKLDTPRKT-NKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNP-NNTLFSKVLNKGDVFVFPQGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDEVLAKAFQVEKGTIDWLQAQFWENN 222          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL81_ORYSJ (Putative germin-like protein 8-1 OS=Oryza sativa subsp. japonica GN=Os08g0188900 PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.259e-54
Identity = 114/189 (60.32%), Postives = 140/189 (74.07%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSG-LDKPGNTA-NRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTN-AVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQ 563
            CVA  D    V VNG  CK+P    A+DFF +  LDKP +TA N++G ++T  NV +IPGLNTLGIS VR+DYAP G NPPHTHPRATEI  VLEGTLYVGFVTSN  +N L +KVLNKGDVFVFP G+IHFQFN+     A+A +++ SQ PG+ITIA+ VF ++PPI+ D L KAFQ+D  ++  LQ
Sbjct:   33 CVA--DLNSAVRVNGFACKNPTNVSADDFFKAAMLDKPRDTAVNKVGSNITLINVMEIPGLNTLGISIVRVDYAPLGLNPPHTHPRATEIFTVLEGTLYVGFVTSNP-DNKLFSKVLNKGDVFVFPKGLIHFQFNLDPHKPAIATSAISSQNPGIITIANAVFRSNPPISDDILAKAFQVDKKIIDLLQ 218          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL122_ORYSJ (Germin-like protein 12-2 OS=Oryza sativa subsp. japonica GN=Os12g0154800 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.257e-54
Identity = 121/198 (61.11%), Postives = 137/198 (69.19%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSG-LDKPGNTA-NRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLN--NTLIAKVLNKGDVFVFPIGMIHFQFNIGKTN-AVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKFINGN 584
            CVA  D    V VNG  CKD K    +DFFL+  LDKP +T  ++ G +VT  NV ++ GLNTLGIS  RIDYAP GQNPPHTHPRATEIL VLEGTLYVGFVTSNQ N  N L  K LNKGDVFVFP G+IHFQFN      AVA A+L SQ PG ITIA+ VFG++ PI+ D L KAFQ+D   V  LQ +F   N
Sbjct:   32 CVA--DRNSPVHVNGFPCKDAKDVNVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILTVLEGTLYVGFVTSNQANGENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAITIANAVFGSNSPISDDVLAKAFQVDKKAVDWLQAQFWENN 227          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL14_ARATH (Germin-like protein subfamily 1 member 4 OS=Arabidopsis thaliana GN=At3g04180 PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 5.560e-54
Identity = 107/189 (56.61%), Postives = 133/189 (70.37%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKF 572
            CVA N+  +GV+VNG+FCKDPK     DF+ SGL+ PGNT    G   T  +VE++PGLNTLG+   R D+AP G +PPHTHPR ++I +V++G L+VGFV+SN+ N TL  KVL  GDVFVFP G+IHF  NIG+TNAV  ++ GSQ PG I I D VFG+ P I+P  L KAF LD N VK LQ  F
Sbjct:   34 CVATNET-NGVYVNGEFCKDPKRVTTNDFYTSGLNVPGNTIIGPGARNTVVDVERLPGLNTLGVDIARYDFAPGGLDPPHTHPRGSQIFLVMKGKLFVGFVSSNEYNYTLFTKVLYPGDVFVFPKGLIHFHANIGETNAVVISAGGSQDPGRIIIGDAVFGSKPLIDPKVLAKAFALDYNKVKYLQAVF 221          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL124_ORYSJ (Putative germin-like protein 12-4 OS=Oryza sativa subsp. japonica GN=Os12g0155000 PE=3 SV=2)

HSP 1 Score: 207.994 bits (528), Expect = 3.604e-53
Identity = 119/198 (60.10%), Postives = 136/198 (68.69%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSG-LDKPGNTA-NRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLN--NTLIAKVLNKGDVFVFPIGMIHFQFNIGKTN-AVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKFINGN 584
            CVA  D    V VNG  CKD K    +DFFL+  LDKP +T  ++ G +VT  NV ++ GLNTL IS  RIDYAP GQNPPHTHPRATEIL VLEG+LYVGFVTSNQ N  N L  K LNKGDVFVFP G+IHFQFN      AVA A+L SQ PG ITIA+ VFG+ PPI+ D L KAFQ+D   +  LQ +F   N
Sbjct:   32 CVA--DKHSPVRVNGLPCKDAKDVSVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLSISMARIDYAPKGQNPPHTHPRATEILTVLEGSLYVGFVTSNQANRENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAITIANAVFGSHPPISDDVLAKAFQVDKKAMDWLQAQFWENN 227          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL123_ORYSJ (Putative germin-like protein 12-3 OS=Oryza sativa subsp. japonica GN=Os12g0154900 PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 3.604e-53
Identity = 118/199 (59.30%), Postives = 137/199 (68.84%), Query Frame = 3
Query:    3 ICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSG-LDKPGN-TANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLN--NTLIAKVLNKGDVFVFPIGMIHFQFNIGKTN-AVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKFINGN 584
            +CVA  D    V VNG  CKD K    +DFFL+  LDKP + T ++ G +VT  NV ++ GLNTLGIS  RIDYAP GQNPPHTHPRATEIL V+EG+LYVGFVTSNQ N  N L  K LNKGDVFVFP G+IHFQFN      A A  +L SQ PG ITIA+ VFG++PPI+ D L KAFQ+D   V  LQ +F   N
Sbjct:   31 LCVA--DKNSPVRVNGFPCKDAKDVSVDDFFLAANLDKPMDITKSKAGSNVTLINVMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILSVIEGSLYVGFVTSNQANGENKLFTKTLNKGDVFVFPEGLIHFQFNPSYDKPAAAIVALSSQNPGAITIANAVFGSNPPISDDVLAKAFQVDKKAVDWLQAQFWENN 227          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL812_ORYSJ (Germin-like protein 8-12 OS=Oryza sativa subsp. japonica GN=Os08g0231400 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 8.028e-53
Identity = 115/195 (58.97%), Postives = 134/195 (68.72%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSG-LDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTN-AVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKFINGN 584
            CVA  D    V VNG  CK+P    +EDFF +   D P NT N+LG +VTN NV + PGLNTLGIS  RIDYAP G NPPH HPRATE+L VLEGTLYVGFVTSN   N L +KV+ KGDVFVFP  MIHFQ N+     AVA ++L SQ PGVITIA  VFG+ PPI+ D L KAFQ++  ++  LQ +F   N
Sbjct:   33 CVA--DMNSPVRVNGFACKNPMDVSSEDFFNAAKFDMPRNTFNKLGSNVTNLNVMEFPGLNTLGISLARIDYAPMGVNPPHIHPRATELLTVLEGTLYVGFVTSNP--NKLFSKVVCKGDVFVFPKAMIHFQMNLDHDKPAVAQSALSSQNPGVITIASAVFGSQPPISDDVLTKAFQVEKKLIDWLQSQFWENN 223          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL84_ORYSJ (Germin-like protein 8-4 OS=Oryza sativa subsp. japonica GN=GER1 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 5.204e-52
Identity = 113/195 (57.95%), Postives = 134/195 (68.72%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSG-LDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTN-AVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKFINGN 584
            CVA  D K  V VNG  CK+P    ++DFF +   D P +T N++G +VTN NV   PGLNTLGIS  RIDYAP G NPPH HPRATE+L VLEGTLYVGFVTSN   N L +KV++KGD FVFP  MIHFQ N+     AVA +SL SQ PGVITIA  VFG+ PPI+ D L KAFQ++  V+  L+ +F   N
Sbjct:   33 CVA--DMKSPVRVNGFPCKNPMEVNSDDFFNAAKFDMPRSTMNKVGSNVTNLNVLNFPGLNTLGISLARIDYAPLGVNPPHIHPRATELLTVLEGTLYVGFVTSNP--NRLFSKVVHKGDTFVFPKAMIHFQMNLDHNKPAVAQSSLNSQNPGVITIASAVFGSKPPISDDVLTKAFQVEKKVIDWLKSQFWESN 223          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL83_ORYSJ (Germin-like protein 8-3 OS=Oryza sativa subsp. japonica GN=GER2 PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 6.796e-52
Identity = 112/195 (57.44%), Postives = 134/195 (68.72%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSG-LDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTN-AVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKFINGN 584
            CVA  D    V VNG  CK+P    ++DFF +   D P NT N++G +VTN NV   PGLNTLGIS  RIDYAP G NPPH HPRATE+L VLEGTLYVGFVTSN   N L +KV++KGDVFVFP  MIHFQ N+     AVA ++L SQ PGVITIA  +FG+ PPI+ D L KAFQ++  V+  L+ +F   N
Sbjct:   33 CVA--DMASPVRVNGFPCKNPMNVTSDDFFNAAKFDMPRNTMNKVGSNVTNLNVINFPGLNTLGISLARIDYAPMGVNPPHVHPRATELLTVLEGTLYVGFVTSNP--NRLFSKVVHKGDVFVFPKAMIHFQMNLDHNKPAVAQSALSSQNPGVITIASAIFGSTPPISDDVLVKAFQVEKKVIDWLKSQFSENN 223          
The following BLAST results are available for this feature:
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
GL121_ORYSJ2.496e-5461.11Germin-like protein 12-1 OS=Oryza sativa subsp. ja... [more]
GL85_ORYSJ3.259e-5461.54Germin-like protein 8-5 OS=Oryza sativa subsp. jap... [more]
GL81_ORYSJ3.259e-5460.32Putative germin-like protein 8-1 OS=Oryza sativa s... [more]
GL122_ORYSJ4.257e-5461.11Germin-like protein 12-2 OS=Oryza sativa subsp. ja... [more]
GL14_ARATH5.560e-5456.61Germin-like protein subfamily 1 member 4 OS=Arabid... [more]
GL124_ORYSJ3.604e-5360.10Putative germin-like protein 12-4 OS=Oryza sativa ... [more]
GL123_ORYSJ3.604e-5359.30Putative germin-like protein 12-3 OS=Oryza sativa ... [more]
GL812_ORYSJ8.028e-5358.97Germin-like protein 8-12 OS=Oryza sativa subsp. ja... [more]
GL84_ORYSJ5.204e-5257.95Germin-like protein 8-4 OS=Oryza sativa subsp. jap... [more]
GL83_ORYSJ6.796e-5257.44Germin-like protein 8-3 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00322 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00322 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623231 ID=BQ623231; Name=BQ623231; organism=Citrus sinensis; type=EST; length=667bp
ATATCTGTGTCGCCATCAATGATCCCAAGGATGGTGTGTTTGTGAATGGG
AAGTTCTGCAAGGACCCCAAGCTTGCGAAAGCAGAAGATTTCTTTTTATC
AGGGCTAGACAAGCCTGGAAACACAGCAAATCGACTTGGCTTTAGTGTGA
CAAATGCAAATGTTGAGCAAATTCCAGGACTTAACACTCTTGGCATATCA
GCAGTCCGTATTGACTACGCGCCATACGGTCAAAATCCACCTCACACTCA
CCCCCGTGCCACTGAAATCCTGGTGGTCCTGGAAGGAACTCTTTATGTTG
GTTTTGTGACATCGAACCAACTAAATAACACACTCATCGCAAAAGTTCTG
AACAAGGGAGACGTTTTTGTGTTTCCAATTGGTATGATTCACTTCCAATT
CAACATTGGAAAAACAAATGCAGTTGCGTTTGCCAGTTTGGGCAGCCAGT
TCCCTGGTGTCATTACCATAGCCGACACGGTCTTCGGAGCCGATCCTCCA
ATCAATCCCGATTTTCTTGGCAAGGCATTCCAGTTGGACCCAAACGTTGT
GAAAGATCTTCAGAAGAAGTTCATTAATGGCAATTAGGAGAACAGAATGA
GCTTTCCGGTGGCTTTACTATTTTTCCTCCATTATATCATATCGGGTTGT
AATAAAAGAGGTCTCTT
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