BQ623231

Overview
NameBQ623231
Unique NameBQ623231
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL32_ORYSJ (Putative germin-like protein 3-2 OS=Oryza sativa subsp. japonica GN=Os03g0651800 PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.157e-49
Identity = 100/191 (52.36%), Postives = 131/191 (68.59%), Query Frame = 3
Query:    3 ICVAINDPKDGVF-VNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKF 572
            +CVA      G   +NG  CK  +   A DFF  GL   GNT N +G  VT A+VE++PGLNT+G+S  RIDYAP+G +PPHTHPRATEI+ V EGTL VGFVT+    N L  + ++KG+VFVFP G++HFQ N G T+A+A A+  SQ PG  +IADT+FGA PP+  D L +AFQ+D  +V+ ++ KF
Sbjct:   31 VCVADYKSLRGPLRLNGIPCKRLENVTANDFFFDGLTNAGNTTNAVGSLVTAASVERLPGLNTMGVSMARIDYAPWGLSPPHTHPRATEIMFVAEGTLDVGFVTT---ANKLFTRTVSKGEVFVFPRGLVHFQRNSGNTSALAIAAFNSQLPGTQSIADTLFGAAPPLPSDTLARAFQVDGGMVESIKSKF 218          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL13_ORYSJ (Germin-like protein 1-3 OS=Oryza sativa subsp. japonica GN=GER8 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 5.954e-48
Identity = 100/192 (52.08%), Postives = 130/192 (67.71%), Query Frame = 3
Query:    3 ICVA-INDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKFI 575
            +CVA     K  + +NG  CK  +   A DFF  GL K GNT N +G  VT A+VE +PGLNT+G+S  RIDYAP+G NPPHTHPRATEI+ V+EG+L VGFVT+    N L  + + KG+VFVFP G++HFQ N G T A A A+L SQ PG  +IA  +FGA PP+  D L +AFQ+D  +V+ ++ KF+
Sbjct:   31 VCVADYKSLKGPLRLNGFPCKRIENVTANDFFFDGLMKAGNTGNAVGSVVTAASVESLPGLNTMGVSMARIDYAPWGLNPPHTHPRATEIIFVVEGSLDVGFVTT---ANKLFTRTVCKGEVFVFPRGLVHFQKNNGNTPAFAIAALNSQLPGTQSIAAALFGAAPPLPSDTLARAFQVDGGMVEFIKSKFV 219          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: RHRE_PEA (Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 4.717e-45
Identity = 98/190 (51.58%), Postives = 120/190 (63.16%), Query Frame = 3
Query:    3 ICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKF 572
            +CVA  D    + VNG  CK      AEDFF + L K G T N  G  VT ANV++IPGLNTLG+S  RIDYAP G NPPHTHPRATE++ VLEG L VGF+T+    N LIAK + KG+ FVFP G++HFQ N G   A   A   SQ PG + I  T+F A PP+  + L KAFQ+    V+ ++ KF
Sbjct:   29 LCVA--DYASVILVNGFACKPASNVTAEDFFSNLLVKQGATNNTFGSLVTGANVQRIPGLNTLGVSMARIDYAPGGLNPPHTHPRATEMVFVLEGQLDVGFITT---TNQLIAKTIAKGETFVFPKGLVHFQKNNGWEPATVIAGFNSQLPGTVNIPLTLFNATPPVPDNVLTKAFQIGTKEVQKIKSKF 213          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL11_ORYSJ (Germin-like protein 1-1 OS=Oryza sativa subsp. japonica GN=GER4 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.341e-44
Identity = 98/190 (51.58%), Postives = 120/190 (63.16%), Query Frame = 3
Query:    3 ICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKF 572
            +CVA  D    V +NG  CK      A+DFF +GL  PGNT N  G +VT ANV+  PG+NTLG+S  RIDYAP GQNPPHTHPRATEI+ VLEG L VGF+T+    N L  K +  G+VFVFP G++HFQ N G   A   A+  SQ  G   IA T+F A PP+  D L KAF++D   V  ++ KF
Sbjct:   33 VCVA--DLASPVKLNGFPCKAN--VTADDFFFAGLKNPGNTNNPAGSNVTAANVQSFPGVNTLGVSMARIDYAPGGQNPPHTHPRATEIIFVLEGVLEVGFITT---ANKLFTKTVTAGEVFVFPRGLVHFQQNRGHGPAAVIAAFNSQLQGTQAIAATLFAAAPPVPSDVLAKAFRVDVPQVDAIKAKF 215          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL23_ARATH (Germin-like protein subfamily 2 member 3 OS=Arabidopsis thaliana GN=GLP8 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.162e-43
Identity = 95/190 (50.00%), Postives = 122/190 (64.21%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANR-LGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKF 572
            CVA  D  +G+ VNG  CKDP     EDF+  GL     TAN  +G +VT ANVE++PGLNTLG+S  RIDYAP G NPPH HPRA+E + VLEG L+VGF+T+      LI+K +NKGDVFVFP  ++HFQ N  K  A   A+  SQ PG   +  ++FG++PPI  D L KAF      ++ ++ KF
Sbjct:   31 CVA--DLSNGLKVNGYPCKDPAKVTPEDFYFIGLATAAATANSSMGSAVTGANVEKVPGLNTLGVSISRIDYAPGGLNPPHLHPRASEAIFVLEGRLFVGFLTT---TGKLISKHVNKGDVFVFPKALLHFQQNPNKAPASVLAAFDSQLPGTQVVGPSLFGSNPPIPDDLLAKAFGAAAPEIQKIKGKF 215          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: NEC1_NICLS (Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae GN=NECI PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.982e-43
Identity = 94/190 (49.47%), Postives = 123/190 (64.74%), Query Frame = 3
Query:    3 ICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKF 572
            +CVA  D    V VNG  CK      A DF    + KPG T N+ G  VT ANVEQ+PGLNTLG+S  RIDYAP G NPPHTHPRA+E++ V+EG L VGF+T+    N L++K + KG+VFVFP G++HFQ N G+  A   ++  SQ PG  +I  T+FGA PP+  D L + FQ++   V+ ++ KF
Sbjct:   41 VCVA--DLHSKVKVNGFPCKTN--FTAADFSSLAISKPGATNNKFGSVVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFITT---ANVLVSKKIIKGEVFVFPRGLVHFQKNNGEVPAAVISAFNSQLPGTQSIPITLFGASPPVPDDVLAQTFQINTEDVQQIKSKF 223          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: NEC1_NICPL (Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.415e-43
Identity = 94/190 (49.47%), Postives = 122/190 (64.21%), Query Frame = 3
Query:    3 ICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKF 572
            +CVA  D    V VNG  CK      A DF    + KPG T N+ G  VT ANVEQ+PGLNTLG+S  RIDYAP G NPPHTHPRA+E++ V+EG L VGF+T+    N L++K + KG+VFVFP G++HFQ N GK  A   ++  SQ PG  +I  T+FGA P +  D L + FQ++   V+ ++ KF
Sbjct:   41 VCVA--DLHSKVKVNGFPCKTN--FTAADFSSFAISKPGATNNKFGSKVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFITT---ANVLVSKQITKGEVFVFPRGLVHFQKNNGKIPAAVVSAFNSQLPGTQSIPITLFGASPTVPDDVLAQTFQINIEDVQQIKSKF 223          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL25_ARATH (Probable germin-like protein subfamily 2 member 5 OS=Arabidopsis thaliana GN=At5g26700 PE=2 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 4.415e-43
Identity = 98/190 (51.58%), Postives = 119/190 (62.63%), Query Frame = 3
Query:    3 ICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKF 572
            +CVA  D  + V VNG  CKD      EDF+  GL     T    G  VT ANVE++PGLNTLG+S  RIDYAP G NPPH HPRA+EI+ VLEG LYVGFVT+      LIAK LNKGDVF FP G+IHFQ NI  + A   A+  SQ PG  ++  ++FGA P    D L K+FQL    VK ++ ++
Sbjct:   28 VCVA--DLSNAVKVNGYTCKDSTQITPEDFYFKGLANIAATNTSTGSVVTGANVEKLPGLNTLGLSMSRIDYAPNGLNPPHVHPRASEIIFVLEGQLYVGFVTT---AGKLIAKNLNKGDVFTFPKGLIHFQKNIANSPASVLAAFDSQLPGTQSLVASLFGALP---DDILAKSFQLKHKQVKKIKLRY 209          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL22_ARATH (Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana GN=At1g02335 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.767e-43
Identity = 89/189 (47.09%), Postives = 121/189 (64.02%), Query Frame = 3
Query:    3 ICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKK 569
            +CVA  D   G  +NG  CK+       DFF +G+ KP    + +G +VT ANVE+IPGLNTL +S  RIDYAP G NPPHTHPRATE++ VLEG L VGF+T+    N L  K +  G+VFVFP G++HFQ N GK+ A   ++  SQ PG  ++A T+F A+P +  D L K FQ+   +V  ++++
Sbjct:   31 LCVA--DKSHGTKLNGFPCKETLNITESDFFFAGISKPAVINSTMGSAVTGANVEKIPGLNTLSVSLARIDYAPGGLNPPHTHPRATEVVYVLEGELEVGFITT---ANKLFTKTIKIGEVFVFPRGLVHFQKNNGKSPASVLSAFNSQLPGTASVAATLFAAEPALPEDVLTKTFQVGSKMVDKIKER 214          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL14_ORYSJ (Germin-like protein 1-4 OS=Oryza sativa subsp. japonica GN=Os01g0952100 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.285e-42
Identity = 97/197 (49.24%), Postives = 129/197 (65.48%), Query Frame = 3
Query:    3 ICVAINDPKDGVF-VNGKFCKDPKLAKAEDFFLSGLDKPGN--TANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYG-QNPPHTHPRATEILVVLEGTLYVGFV--TSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINP-DFLGKAFQLDPNVVKDLQKKF 572
            ICVA      G   VNG  CK      AEDFF  GL KP +  + N +G +VT A VE+IPGLNTLG+S  R+DYAP+G  NPPH+HPRATEIL V +G L VGFV  T+   ++ LI +V+ KG VFVFP G++H++ ++G+  AVA ++  SQ PG    AD +FG+  P  P D L +AFQ+D  VV++++ KF
Sbjct:   36 ICVADYKSLQGPLRVNGFPCKPEANVTAEDFFFPGLGKPADVYSGNPMGSAVTAATVERIPGLNTLGVSMARVDYAPWGGANPPHSHPRATEILFVADGLLEVGFVVATAAPASSRLITRVVPKGGVFVFPRGLLHYERSVGEKPAVAISAFDSQLPGTQAAADALFGSSSPAVPTDVLARAFQVDGGVVENIKSKF 232          
The following BLAST results are available for this feature:
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
GL32_ORYSJ3.157e-4952.36Putative germin-like protein 3-2 OS=Oryza sativa s... [more]
GL13_ORYSJ5.954e-4852.08Germin-like protein 1-3 OS=Oryza sativa subsp. jap... [more]
RHRE_PEA4.717e-4551.58Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1... [more]
GL11_ORYSJ2.341e-4451.58Germin-like protein 1-1 OS=Oryza sativa subsp. jap... [more]
GL23_ARATH1.162e-4350.00Germin-like protein subfamily 2 member 3 OS=Arabid... [more]
NEC1_NICLS1.982e-4349.47Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana s... [more]
NEC1_NICPL4.415e-4349.47Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE... [more]
GL25_ARATH4.415e-4351.58Probable germin-like protein subfamily 2 member 5 ... [more]
GL22_ARATH5.767e-4347.09Germin-like protein subfamily 2 member 2 OS=Arabid... [more]
GL14_ORYSJ1.285e-4249.24Germin-like protein 1-4 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00322 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00322 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623231 ID=BQ623231; Name=BQ623231; organism=Citrus sinensis; type=EST; length=667bp
ATATCTGTGTCGCCATCAATGATCCCAAGGATGGTGTGTTTGTGAATGGG
AAGTTCTGCAAGGACCCCAAGCTTGCGAAAGCAGAAGATTTCTTTTTATC
AGGGCTAGACAAGCCTGGAAACACAGCAAATCGACTTGGCTTTAGTGTGA
CAAATGCAAATGTTGAGCAAATTCCAGGACTTAACACTCTTGGCATATCA
GCAGTCCGTATTGACTACGCGCCATACGGTCAAAATCCACCTCACACTCA
CCCCCGTGCCACTGAAATCCTGGTGGTCCTGGAAGGAACTCTTTATGTTG
GTTTTGTGACATCGAACCAACTAAATAACACACTCATCGCAAAAGTTCTG
AACAAGGGAGACGTTTTTGTGTTTCCAATTGGTATGATTCACTTCCAATT
CAACATTGGAAAAACAAATGCAGTTGCGTTTGCCAGTTTGGGCAGCCAGT
TCCCTGGTGTCATTACCATAGCCGACACGGTCTTCGGAGCCGATCCTCCA
ATCAATCCCGATTTTCTTGGCAAGGCATTCCAGTTGGACCCAAACGTTGT
GAAAGATCTTCAGAAGAAGTTCATTAATGGCAATTAGGAGAACAGAATGA
GCTTTCCGGTGGCTTTACTATTTTTCCTCCATTATATCATATCGGGTTGT
AATAAAAGAGGTCTCTT
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