BQ623231

Overview
NameBQ623231
Unique NameBQ623231
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL11_ARATH (Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana GN=GLP7 PE=2 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 1.924e-30
Identity = 70/179 (39.11%), Postives = 106/179 (59.22%), Query Frame = 3
Query:   36 VFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANR-LGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGK-TNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQK 566
            +F+NGK CKDP  A   DF  S L +PGNT  +    +VT      +PGLNT+G++  R+D+   G  PPH HPRA+E+ V L+G L VGFV +   +  +  + L+ G+ FVFP G+IHF +NI   ++A+A + L SQ PG   ++ + F + PP   + L  A+ ++   V  ++K
Sbjct:   38 IFLNGKLCKDPTQASVSDFSTSALSRPGNTKTKPFMINVTVTTTANLPGLNTVGLTMARLDFGGSGVVPPHVHPRASEVTVCLDGVLLVGFVDT---SGRVFTQELHPGETFVFPKGLIHFLYNIDTVSSALAVSGLSSQNPGTQIVSLSSFISKPPFLVEVLKSAYDINGQDVARIRK 213          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: ABP20_PRUPE (Auxin-binding protein ABP20 OS=Prunus persica GN=ABP20 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.282e-30
Identity = 76/172 (44.19%), Postives = 101/172 (58.72%), Query Frame = 3
Query:   48 GKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQ 563
            G  CK P   K  DF  SGL   GNT+N +  +VT A V Q PG+N LGIS  R+D A  G  P HTHP A+E+L+V +GT+  GFV S   +NT   + L KGD+ VFP G++HFQ N G+  A+AFAS GS  PG+  +   +F  D P   + + +   LD   +K L+
Sbjct:   41 GFSCKKPASVKVNDFVFSGLGIAGNTSNIIKAAVTPAFVAQFPGVNGLGISIARLDLAVGGVVPFHTHPGASEVLIVAQGTICAGFVAS---DNTPYLQTLEKGDIMVFPQGLLHFQVNGGEAPALAFASFGSASPGLQILDFALFKNDLP--TEVIAQTTFLDAAQIKKLK 207          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: AB19B_PRUPE (Auxin-binding protein ABP19b OS=Prunus persica GN=ABP19B PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.598e-30
Identity = 78/186 (41.94%), Postives = 102/186 (54.84%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQ 563
            CVA     DG    G  CK P +    DF  SGL   GNT N    +VT A   Q PG+N LGIS  R+D  P G  P HTHP A+E+L+V++GT+  GFV S   +NT   K L KGD+ VFP G++HFQ N G T A+AF S  S  PG+  +   +F  D  +  + + +   LD   +K L+
Sbjct:   24 CVADYKAPDGPA--GYSCKKPAIVTVNDFVYSGLGIAGNTTNIFKAAVTPAFAAQFPGVNGLGISLARLDLGPGGVVPFHTHPGASEVLLVVQGTIIAGFVAS---DNTPYLKTLKKGDIIVFPQGLLHFQVNGGDTPAIAFPSFSSPSPGLQIVDFALFKND--LATELIAQTTLLDAPQIKKLK 202          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: AB19A_PRUPE (Auxin-binding protein ABP19a OS=Prunus persica GN=ABP19A PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.629e-29
Identity = 79/186 (42.47%), Postives = 102/186 (54.84%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQ 563
            CVA     DG    G  CK P      DF  SGL   GNT N +  +VT A   Q PG+N LGIS  R+D  P G  P HTHP A+E+L+V++GT+  GFV S   +NT   K L KGD+ VFP G++HFQ N G T A+AF S  S  PG+  +   +F  D P   + + +   LD   +K L+
Sbjct:   24 CVADYKAPDGPA--GYSCKKPAKVTINDFVYSGLGIAGNTTNIIKAAVTPAFAAQFPGVNGLGISLARLDLGPGGVIPFHTHPGASEVLLVVQGTIIAGFVAS---DNTPYLKTLKKGDIMVFPQGLLHFQVNGGGTPALAFPSFSSPSPGLQILDFALFKNDLP--TELIAQTTFLDAAQIKKLK 202          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL33_ARATH (Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana GN=GER3 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.629e-29
Identity = 71/165 (43.03%), Postives = 96/165 (58.18%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPP 500
            CVA  DPK     +G  CK+P      DF  +GL   GNT+N +  +VT A      G+N LG+S  R+D A  G  P HTHP A+E+LVV++GT+  GF++S    N +  K LN+GD  VFP G++HFQ N GK  A+AF + GS  PG+  +   +F  D P
Sbjct:   26 CVA--DPKGPQSPSGYSCKNPDQVTENDFAFTGLGTAGNTSNIIKAAVTPAFAPAYAGINGLGVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFISS---ANKVYLKTLNRGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPGLQILPFALFANDLP 185          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GLP1_SINAL (Germin-like protein 1 OS=Sinapis alba GN=GLP1 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.739e-29
Identity = 72/165 (43.64%), Postives = 96/165 (58.18%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPP 500
            CVA  DPK     +G  CK+P      DF  SGL K GNT+N +  +VT A      GLN L +S  R+D A  G  P HTHP A+E+LVV++GT+  GF++S    N +  K L++GD  VFP G++HFQ N GK  A+AF + GS  PG+  +   +F  D P
Sbjct:   26 CVA--DPKGPQNPSGYSCKNPDQVTENDFAFSGLGKAGNTSNVIKAAVTPAFAPAFAGLNGLDVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFISS---ANKVYLKTLSRGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPGLQILPFALFANDLP 185          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL31_ARATH (Germin-like protein subfamily 3 member 1 OS=Arabidopsis thaliana GN=GLP1 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 8.938e-28
Identity = 73/169 (43.20%), Postives = 94/169 (55.62%), Query Frame = 3
Query:   57 CKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQ 563
            C  P   KA DF  SGL  PGNT N +  +VT A   Q PGLN LG+S  R+D AP G  P HTHP A+E+L VL G++  GFV+S    N +  + L  G V VFP G++HFQ N GK++A A  +  S  PG+  +   +F    P     +G  F LD   VK L+
Sbjct:   38 CIRPIHVKATDFVFSGLGTPGNTTNIINAAVTPAFAAQFPGLNGLGLSTARLDLAPKGVIPMHTHPGASEVLFVLTGSITAGFVSS---ANAVYVQTLKPGQVMVFPQGLLHFQINAGKSSASAVVTFNSANPGLQILDFALFANSLPTEL-VVGTTF-LDATTVKKLK 201          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL34_ARATH (Germin-like protein subfamily 3 member 4 OS=Arabidopsis thaliana GN=At5g61750 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.991e-27
Identity = 68/152 (44.74%), Postives = 93/152 (61.18%), Query Frame = 3
Query:   39 FVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGAD 494
            F+NG  CK+P    A+DF  + L + G+T N L  +VT     + PGLNTLG+S  R D    G  P H+HPR++E+L V++G ++ GFV +   NN +   VL KGDVFVFP G++HF  + G   A AF+   SQ PGV+ I + VFG D
Sbjct:   38 FINGYPCKNPTKITAQDFKSTKLTEAGDTDNYLQSNVTLLTALEFPGLNTLGLSVSRTDLERDGSVPFHSHPRSSEMLFVVKGVVFAGFVDT---NNKIFQTVLQKGDVFVFPKGLLHFCLSGGFEPATAFSFYNSQNPGVVNIGE-VFGID 185          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL813_ORYSJ (Germin-like protein 8-13 OS=Oryza sativa subsp. japonica GN=Os08g0459700 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.436e-27
Identity = 73/189 (38.62%), Postives = 106/189 (56.08%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQKKF 572
            CVA N P      +G  C+      A DF+   L +PG        S+ +A V+Q P +N LGISA R+D  P G  P HTHP  +E+L VL+G L  GF++S+  +N +  K ++KG +FVFP G++HFQ+N G T AVAFA+  S  PG+  +   +F  + P +  ++ K   L    V+ L+ KF
Sbjct:   32 CVA-NLPLGADTPSGYQCRPAATVTAADFYSGALARPGILIRPFNTSLASAFVQQYPAVNGLGISASRVDILPGGVVPLHTHPAGSELLYVLDGALVAGFISSS--DNKVYYKEVSKGGMFVFPQGLLHFQYNTGDTTAVAFAAYSSSNPGLQILDYALFANNLPTS--YVVKGTFLAEAEVRRLKSKF 215          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GLP1_BRANA (Germin-like protein 1 OS=Brassica napus GN=GER1 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.405e-26
Identity = 69/169 (40.83%), Postives = 93/169 (55.03%), Query Frame = 3
Query:   57 CKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQ 563
            C  P   KA DF  S L  PGNT N +  +VT   V Q P LN LGIS  R+D AP G  P HTHP A+E+L VL+G++  GF++S    N++  + L  G V VFP G++HFQ N GKT A A  +  S  PG+  +   +F     ++ + +     L P  VK L+
Sbjct:   38 CIRPIHVKASDFVFS-LGTPGNTTNIISAAVTPGFVAQFPALNGLGISTARLDLAPKGVIPMHTHPGASEVLFVLDGSITAGFISS---ANSVYVQTLKPGQVMVFPQGLLHFQINAGKTPAAALVTFSSASPGLQILDFALFA--NTLSTELVSATTFLPPATVKTLK 200          
The following BLAST results are available for this feature:
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
GL11_ARATH1.924e-3039.11Germin-like protein subfamily 1 member 1 OS=Arabid... [more]
ABP20_PRUPE3.282e-3044.19Auxin-binding protein ABP20 OS=Prunus persica GN=A... [more]
AB19B_PRUPE5.598e-3041.94Auxin-binding protein ABP19b OS=Prunus persica GN=... [more]
AB19A_PRUPE1.629e-2942.47Auxin-binding protein ABP19a OS=Prunus persica GN=... [more]
GL33_ARATH3.629e-2943.03Germin-like protein subfamily 3 member 3 OS=Arabid... [more]
GLP1_SINAL4.739e-2943.64Germin-like protein 1 OS=Sinapis alba GN=GLP1 PE=2... [more]
GL31_ARATH8.938e-2843.20Germin-like protein subfamily 3 member 1 OS=Arabid... [more]
GL34_ARATH1.991e-2744.74Germin-like protein subfamily 3 member 4 OS=Arabid... [more]
GL813_ORYSJ4.436e-2738.62Germin-like protein 8-13 OS=Oryza sativa subsp. ja... [more]
GLP1_BRANA6.405e-2640.83Germin-like protein 1 OS=Brassica napus GN=GER1 PE... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00322 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00322 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623231 ID=BQ623231; Name=BQ623231; organism=Citrus sinensis; type=EST; length=667bp
ATATCTGTGTCGCCATCAATGATCCCAAGGATGGTGTGTTTGTGAATGGG
AAGTTCTGCAAGGACCCCAAGCTTGCGAAAGCAGAAGATTTCTTTTTATC
AGGGCTAGACAAGCCTGGAAACACAGCAAATCGACTTGGCTTTAGTGTGA
CAAATGCAAATGTTGAGCAAATTCCAGGACTTAACACTCTTGGCATATCA
GCAGTCCGTATTGACTACGCGCCATACGGTCAAAATCCACCTCACACTCA
CCCCCGTGCCACTGAAATCCTGGTGGTCCTGGAAGGAACTCTTTATGTTG
GTTTTGTGACATCGAACCAACTAAATAACACACTCATCGCAAAAGTTCTG
AACAAGGGAGACGTTTTTGTGTTTCCAATTGGTATGATTCACTTCCAATT
CAACATTGGAAAAACAAATGCAGTTGCGTTTGCCAGTTTGGGCAGCCAGT
TCCCTGGTGTCATTACCATAGCCGACACGGTCTTCGGAGCCGATCCTCCA
ATCAATCCCGATTTTCTTGGCAAGGCATTCCAGTTGGACCCAAACGTTGT
GAAAGATCTTCAGAAGAAGTTCATTAATGGCAATTAGGAGAACAGAATGA
GCTTTCCGGTGGCTTTACTATTTTTCCTCCATTATATCATATCGGGTTGT
AATAAAAGAGGTCTCTT
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