BQ623231

Overview
NameBQ623231
Unique NameBQ623231
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL31_ORYSJ (Germin-like protein 3-1 OS=Oryza sativa subsp. japonica GN=Os03g0179000 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.405e-26
Identity = 68/178 (38.20%), Postives = 100/178 (56.18%), Query Frame = 3
Query:   42 VNGKFCKDPKLAKAEDFFLSGLDKPGNTANRL-GFSVT-NANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIG-KTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQK 566
            +NG  C DP LA+A+ F  S L +  N A  L GF+ T  +    +PG N  G++  RID AP G  PPH+HPRA+E  +VL G++ VGF  ++     L  ++L  G+ FVFP  M+HF +N+     AV  + L SQ PG   +  + F  +P +  + L KAF++    V+ +QK
Sbjct:   46 LNGLACIDPALARADHFATSALSRATNPAATLYGFNATLTSPAASLPGANAQGLAMARIDLAPGGMAPPHSHPRASEAALVLSGSVLVGFADTSY---RLYTQLLRAGEAFVFPRAMVHFLYNMDTAAPAVVLSGLNSQSPGAQLVPFSAFRTEPRLPDEVLKKAFKITGQDVQRIQK 220          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL92_ORYSJ (Putative germin-like protein 9-2 OS=Oryza sativa subsp. japonica GN=Os09g0568600 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.864e-25
Identity = 67/161 (41.61%), Postives = 96/161 (59.63%), Query Frame = 3
Query:   87 DFF-LSGLDKPGNTANRL---GFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLD-PNVVK 554
            DFF  +G  K  NT++      F+VT A + + P LN   +S   + + P   NPPHTHPR+ E+L+V++G L VGF+ +    N L  + L  GD+FVFP GM+HFQFN G   A+A ++ GS  PGV+ +  TVFG    I+   L K+F+ D P ++K
Sbjct:   48 DFFTFTGFRKVFNTSSAPEPNSFTVTKATMAEFPALNGQSVSYATLVFPPSTVNPPHTHPRSAELLLVVDGALSVGFIDTT---NKLYTQDLAAGDMFVFPKGMVHFQFNSGNQPAMALSAFGSAAPGVVPVPVTVFGTG--IDDAVLAKSFKTDVPTILK 203          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL111_ORYSJ (Germin-like protein 11-1 OS=Oryza sativa subsp. japonica GN=Os11g0537300 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.179e-25
Identity = 64/167 (38.32%), Postives = 87/167 (52.10%), Query Frame = 3
Query:    3 ICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPI 503
            +C      +  +F+NG FCK P    A DF    L+  G+  N +  S       + PGLNTLGIS  R D A  G   PH+HPRA+E++ V  G++  GF  +      L  K L +GDVF+FP G++HF  N G   A  F+ L SQ PGV+ I   +F  D  +
Sbjct:   31 VCPMAPQGERKLFMNGFFCKSPSTIMASDFKTLLLNHAGDLDNMVRSSANIITATEFPGLNTLGISMARTDIAVSGAVLPHSHPRASEMMFVHSGSVVAGFFDT---KGKLFQKTLAEGDVFIFPRGLVHFIMNYGFGLATTFSVLNSQNPGVVGITHAMFAPDSEV 194          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL814_ORYSJ (Germin-like protein 8-14 OS=Oryza sativa subsp. japonica GN=GER5 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.423e-25
Identity = 67/161 (41.61%), Postives = 94/161 (58.39%), Query Frame = 3
Query:   81 AEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQ 563
            A DF   GL   GNT+N +  +VT A V Q PG+N LGISA R+D A  G  P HTHP A+E+L V +GT+  GF+TS+  +NT+  + L  GD+ VFP G++H+Q+N G++ AVA  +     PG+      +F  + P     + K   LD   VK L+
Sbjct:   50 AGDFAYHGLAAAGNTSNLIKAAVTPAFVGQFPGVNGLGISAARLDIAVGGVVPLHTHPAASELLFVTQGTVAAGFITSS--SNTVYTRTLYAGDIMVFPQGLLHYQYNAGQSAAVALVAFSGPNPGLQITDYALFANNLP--SAIVEKVTFLDDAQVKKLK 206          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL93_ORYSJ (Germin-like protein 9-3 OS=Oryza sativa subsp. japonica GN=Os09g0568700 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.995e-24
Identity = 58/141 (41.13%), Postives = 87/141 (61.70%), Query Frame = 3
Query:  141 FSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQ 563
            F+VT A + + P LN   +S   + Y P   NPPHTHPR+ E+L++++G L VGFV +    N L  + L  GD+FVFP GM+HFQFN G   A+A ++ GS   G++++  TVFG +  I+   L K+F+ D   ++ L+
Sbjct:   70 FTVTKATMAEFPALNGQSVSYAVLMYPPATLNPPHTHPRSAELLLLVDGALSVGFVDT---TNKLYTQDLAAGDMFVFPKGMVHFQFNSGNQPAMALSAFGSAAAGLVSVPVTVFGTN--IDDAVLAKSFKTDVPTIQKLK 205          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GLP1_IPONI (Germin-like protein OS=Ipomoea nil GN=GLP PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.075e-23
Identity = 67/152 (44.08%), Postives = 85/152 (55.92%), Query Frame = 3
Query:    6 CVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGV 461
            CVA N P      +G  CK+     A DF  SGL KPGNT N +  +VT A V Q PG+  LG++  R+D AP G  P HTHP A+EIL V+EGT+   F++S    N +  K L  GDV VFP G++ FQ   GK  A     L  + PG+
Sbjct:   28 CVA-NGPGARDTPSGFVCKNTAKVTAADFVYSGLAKPGNTTNIINAAVTPAFVGQFPGVIGLGVTLARLDLAPGGVIPMHTHPGASEILNVVEGTILAAFISS---GNKVYEKALYPGDVMVFPQGLLDFQEITGKI-APGLCELRQRNPGL 174          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: GL91_ORYSJ (Germin-like protein 9-1 OS=Oryza sativa subsp. japonica GN=Os09g0568500 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.805e-20
Identity = 58/151 (38.41%), Postives = 85/151 (56.29%), Query Frame = 3
Query:  117 GNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIG-KTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDPNVVKDLQK 566
            GN+ +    +VT A   + P L    +S   + +     NPPH HPRA+E+LVV++G L VG V + + N T+  + L  GD+FVFP GM+HFQFN G    A AF++ GS  PG I++   +FG+   I+   L K+   D   V  L++
Sbjct:   58 GNSGDPAKLTVTKATHAEFPALLGQSVSYAALVFGAGTVNPPHIHPRASELLVVVQGPLLVGLVDAAR-NGTVYTQTLQTGDMFVFPKGMVHFQFNNGTDVVARAFSAFGSATPGTISLPAALFGSG--IDDTILDKSMHTDQATVDQLKQ 205          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: SR1B_PHYPO (Spherulin-1B OS=Physarum polycephalum PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.980e-12
Identity = 38/87 (43.68%), Postives = 49/87 (56.32%), Query Frame = 3
Query:  228 GQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFG 488
            G N PHTHPRATEI  + +G    GF   NQ   T I  +L +G   VFP G IHF+ N+    A+  A+  ++ PGV T A + FG
Sbjct:  105 GINLPHTHPRATEINFIAKGRFQAGFFLENQA--TFIGHILEEGMATVFPQGAIHFEINLECEPAMFVAAFNNEDPGVQTTASSFFG 189          
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Match: SR1A_PHYPO (Spherulin-1A OS=Physarum polycephalum PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.928e-11
Identity = 43/114 (37.72%), Postives = 56/114 (49.12%), Query Frame = 3
Query:  228 GQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQFNIGKTNAVAFASLGSQFPGVITIADTVFGADPPINPDFLGKAFQLDP-NVVKDLQK 566
            G N PHTHPRATEI  +  G    GF   NQ     I   L  G   VFP G IHF+ N+    A+  A+  ++ PGV T A + FG    +  D +G +  +     V+DL K
Sbjct:  118 GINLPHTHPRATEINFIASGKFEAGFFLENQAK--FIGHTLEAGMATVFPQGAIHFEINMNCEPAMFVAAFNNEDPGVQTTASSFFG----LPADVVGVSLNISSIQTVEDLGK 225          
The following BLAST results are available for this feature:
BLAST of BQ623231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
GL31_ORYSJ6.405e-2638.20Germin-like protein 3-1 OS=Oryza sativa subsp. jap... [more]
GL92_ORYSJ1.864e-2541.61Putative germin-like protein 9-2 OS=Oryza sativa s... [more]
GL111_ORYSJ3.179e-2538.32Germin-like protein 11-1 OS=Oryza sativa subsp. ja... [more]
GL814_ORYSJ5.423e-2541.61Germin-like protein 8-14 OS=Oryza sativa subsp. ja... [more]
GL93_ORYSJ5.995e-2441.13Germin-like protein 9-3 OS=Oryza sativa subsp. jap... [more]
GLP1_IPONI5.075e-2344.08Germin-like protein OS=Ipomoea nil GN=GLP PE=2 SV=... [more]
GL91_ORYSJ1.805e-2038.41Germin-like protein 9-1 OS=Oryza sativa subsp. jap... [more]
SR1B_PHYPO8.980e-1243.68Spherulin-1B OS=Physarum polycephalum PE=2 SV=1[more]
SR1A_PHYPO9.928e-1137.72Spherulin-1A OS=Physarum polycephalum PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00322 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00322 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623231 ID=BQ623231; Name=BQ623231; organism=Citrus sinensis; type=EST; length=667bp
ATATCTGTGTCGCCATCAATGATCCCAAGGATGGTGTGTTTGTGAATGGG
AAGTTCTGCAAGGACCCCAAGCTTGCGAAAGCAGAAGATTTCTTTTTATC
AGGGCTAGACAAGCCTGGAAACACAGCAAATCGACTTGGCTTTAGTGTGA
CAAATGCAAATGTTGAGCAAATTCCAGGACTTAACACTCTTGGCATATCA
GCAGTCCGTATTGACTACGCGCCATACGGTCAAAATCCACCTCACACTCA
CCCCCGTGCCACTGAAATCCTGGTGGTCCTGGAAGGAACTCTTTATGTTG
GTTTTGTGACATCGAACCAACTAAATAACACACTCATCGCAAAAGTTCTG
AACAAGGGAGACGTTTTTGTGTTTCCAATTGGTATGATTCACTTCCAATT
CAACATTGGAAAAACAAATGCAGTTGCGTTTGCCAGTTTGGGCAGCCAGT
TCCCTGGTGTCATTACCATAGCCGACACGGTCTTCGGAGCCGATCCTCCA
ATCAATCCCGATTTTCTTGGCAAGGCATTCCAGTTGGACCCAAACGTTGT
GAAAGATCTTCAGAAGAAGTTCATTAATGGCAATTAGGAGAACAGAATGA
GCTTTCCGGTGGCTTTACTATTTTTCCTCCATTATATCATATCGGGTTGT
AATAAAAGAGGTCTCTT
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