BQ623243

Overview
NameBQ623243
Unique NameBQ623243
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length154
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2038 contig Csv1_Contig2038:368..520. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623243 vs. ExPASy Swiss-Prot
Match: G3P_PANVR (Glyceraldehyde-3-phosphate dehydrogenase OS=Panulirus versicolor PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.256e-12
Identity = 33/41 (80.49%), Postives = 36/41 (87.80%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVGD 124
            F GD+RSSIFDAKAGI LSK FVK+VSWYDNE+GYS RV D
Sbjct:  282 FTGDNRSSIFDAKAGIQLSKTFVKVVSWYDNEFGYSQRVID 322          
BLAST of BQ623243 vs. ExPASy Swiss-Prot
Match: G3P_ASPNG (Glyceraldehyde-3-phosphate dehydrogenase OS=Aspergillus niger GN=gpdA PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 5.256e-12
Identity = 32/39 (82.05%), Postives = 33/39 (84.62%), Query Frame = 2
Query:    8 GDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVGD 124
            GD  SSIFDAKAGIAL+  FVKLVSWYDNEWGYS RV D
Sbjct:  287 GDDHSSIFDAKAGIALNSNFVKLVSWYDNEWGYSRRVVD 325          
BLAST of BQ623243 vs. ExPASy Swiss-Prot
Match: G3P_AJECA (Glyceraldehyde-3-phosphate dehydrogenase OS=Ajellomyces capsulata GN=GPD PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.256e-12
Identity = 31/39 (79.49%), Postives = 34/39 (87.18%), Query Frame = 2
Query:    8 GDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVGD 124
            GDSRSSIFDA AGIAL+  F+KL+SWYDNEWGYS RV D
Sbjct:  287 GDSRSSIFDASAGIALNDHFIKLISWYDNEWGYSRRVVD 325          
BLAST of BQ623243 vs. ExPASy Swiss-Prot
Match: G3P2_RHIRA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Rhizomucor racemosus GN=GPD2 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.256e-12
Identity = 33/41 (80.49%), Postives = 37/41 (90.24%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVGD 124
            FVGD++SSIFDA AGIAL+ KFVKLVSWYDNE+GYS RV D
Sbjct:  285 FVGDAQSSIFDAAAGIALNDKFVKLVSWYDNEFGYSNRVID 325          
BLAST of BQ623243 vs. ExPASy Swiss-Prot
Match: G3P_LENED (Glyceraldehyde-3-phosphate dehydrogenase OS=Lentinula edodes GN=gpd PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.864e-12
Identity = 30/41 (73.17%), Postives = 35/41 (85.37%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVGD 124
            F+GD+ SSIFDA AGI L+K FVKL++WYDNEWGYS RV D
Sbjct:  285 FIGDNHSSIFDATAGIQLNKNFVKLIAWYDNEWGYSGRVVD 325          
BLAST of BQ623243 vs. ExPASy Swiss-Prot
Match: G3P1_SCHPO (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Schizosaccharomyces pombe GN=tdh1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.864e-12
Identity = 32/41 (78.05%), Postives = 34/41 (82.93%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVGD 124
            F GD+ SSIFDA AGI LS +FVKLVSWYDNEWGYS RV D
Sbjct:  286 FCGDNHSSIFDASAGIQLSPQFVKLVSWYDNEWGYSRRVVD 326          
BLAST of BQ623243 vs. ExPASy Swiss-Prot
Match: G3P_SCHCO (Glyceraldehyde-3-phosphate dehydrogenase OS=Schizophyllum commune GN=GPD PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.965e-12
Identity = 30/41 (73.17%), Postives = 35/41 (85.37%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVGD 124
            F G + SSIFD+KAGIA+SK FVKL++WYDNEWGYS RV D
Sbjct:  285 FTGANESSIFDSKAGIAISKSFVKLIAWYDNEWGYSRRVCD 325          
BLAST of BQ623243 vs. ExPASy Swiss-Prot
Match: G3P_PARBA (Glyceraldehyde-3-phosphate dehydrogenase OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=GPD PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.965e-12
Identity = 31/39 (79.49%), Postives = 34/39 (87.18%), Query Frame = 2
Query:    8 GDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVGD 124
            GD RSSIFDA AGIAL+ +FVKL+SWYDNEWGYS RV D
Sbjct:  288 GDPRSSIFDASAGIALNDRFVKLISWYDNEWGYSRRVLD 326          
BLAST of BQ623243 vs. ExPASy Swiss-Prot
Match: G3P_OMPOL (Glyceraldehyde-3-phosphate dehydrogenase OS=Omphalotus olearius GN=GPD PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.965e-12
Identity = 30/41 (73.17%), Postives = 35/41 (85.37%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVGD 124
            F G++ SSIFDA AGIAL+K FVKL++WYDNEWGYS RV D
Sbjct:  285 FTGNTHSSIFDASAGIALNKNFVKLIAWYDNEWGYSRRVVD 325          
BLAST of BQ623243 vs. ExPASy Swiss-Prot
Match: G3P_MONAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Monascus anka GN=GPD1 PE=3 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 8.965e-12
Identity = 32/39 (82.05%), Postives = 33/39 (84.62%), Query Frame = 2
Query:    8 GDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVGD 124
            GD  SSIFDAKAGIAL+  FVKLVSWYDNEWGYS RV D
Sbjct:  288 GDPHSSIFDAKAGIALNSNFVKLVSWYDNEWGYSRRVID 326          
The following BLAST results are available for this feature:
BLAST of BQ623243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
G3P_PANVR5.256e-1280.49Glyceraldehyde-3-phosphate dehydrogenase OS=Panuli... [more]
G3P_ASPNG5.256e-1282.05Glyceraldehyde-3-phosphate dehydrogenase OS=Asperg... [more]
G3P_AJECA5.256e-1279.49Glyceraldehyde-3-phosphate dehydrogenase OS=Ajello... [more]
G3P2_RHIRA5.256e-1280.49Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Rhiz... [more]
G3P_LENED6.864e-1273.17Glyceraldehyde-3-phosphate dehydrogenase OS=Lentin... [more]
G3P1_SCHPO6.864e-1278.05Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Schi... [more]
G3P_SCHCO8.965e-1273.17Glyceraldehyde-3-phosphate dehydrogenase OS=Schizo... [more]
G3P_PARBA8.965e-1279.49Glyceraldehyde-3-phosphate dehydrogenase OS=Paraco... [more]
G3P_OMPOL8.965e-1273.17Glyceraldehyde-3-phosphate dehydrogenase OS=Omphal... [more]
G3P_MONAN8.965e-1282.05Glyceraldehyde-3-phosphate dehydrogenase OS=Monasc... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00334 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00334 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623243 ID=BQ623243; Name=BQ623243; organism=Citrus sinensis; type=EST; length=154bp
CTTTGTTGGTGACAGTAGGTCAAGTATCTTTGATGCCAAGGCTGGTATTG
CTTTGAGTAAGAAATTTGTGAAGCTTGTCTCATGGTATGACAATGAGTGG
GGCTACAGTACTCGTGTGGGGGATTTTGATTGGCCACATGGCGAAGACCC
AGTA
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