BQ623244
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623244 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 6.137e-13 Identity = 36/118 (30.51%), Postives = 54/118 (45.76%), Query Frame = 3 Query: 228 ISDYFQTYQFENLFAKRNTPVAHAVG-FWDYHSFITAAALYQPHGFGTSAGKLMGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPNQIYCDDDFKYTYPCTPGVSYHGQ 578 I F+ + RN F+ Y++FI AA + GFGT+ ++E+AAF +T+ G+ A GP AWG C+ +E YC + +PC PG Y G+ Sbjct: 78 IGSVISNSMFDQMLKHRNDNACQGKNNFYSYNAFINAARSFG--GFGTTGDTTARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSGQ--WPCAPGRKYFGR 191 HSP 2 Score: 29.6462 bits (65), Expect = 6.137e-13 Identity = 12/25 (48.00%), Postives = 16/25 (64.00%), Query Frame = 1 Query: 574 GSGALPLYWNYNYGETGEALKVDIL 648 G G + + NYNYG G A+ VD+L Sbjct: 190 GRGPIQISHNYNYGPCGRAIGVDLL 214
BLAST of BQ623244 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 63.929 bits (154), Expect = 1.033e-12 Identity = 35/111 (31.53%), Postives = 55/111 (49.55%), Query Frame = 3 Query: 255 FENLFAKRNTPVAHAVGFWDYHSFITAAALYQPHGFGTSAGKL-MGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEM--SPNQIYCDDDFKYTYPCTPGVSYHGQ 578 F+ + RN A F+ Y +F+ AA+ + GF + G ++EVAAFL +T+ G+ A GP AWG C+ +E + YC + +PC G Y+G+ Sbjct: 90 FDQMLLHRNDAACPASNFYTYDAFVAAASAFP--GFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQ--WPCAAGKKYYGR 196 HSP 2 Score: 30.0314 bits (66), Expect = 1.033e-12 Identity = 11/25 (44.00%), Postives = 17/25 (68.00%), Query Frame = 1 Query: 574 GSGALPLYWNYNYGETGEALKVDIL 648 G G + L +N+NYG G+A+ D+L Sbjct: 195 GRGPIQLSYNFNYGPAGQAIGADLL 219
BLAST of BQ623244 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 3.815e-12 Identity = 34/110 (30.91%), Postives = 54/110 (49.09%), Query Frame = 3 Query: 255 FENLFAKRNTPVAHAVGFWDYHSFITAAALYQPHGFGTSAGKLMGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPN--QIYCDDDFKYTYPCTPGVSYHGQ 578 F+ + RN A F+ Y +F+ AA + F T+ ++EVAAFL +T+ G+ A GP +WG C+ +E + N YC + +PC G Y+G+ Sbjct: 88 FDQMLLHRNDAACPAKNFYTYDAFVAAANAFP--SFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQ--WPCAAGKKYYGR 193 HSP 2 Score: 28.4906 bits (62), Expect = 3.815e-12 Identity = 10/26 (38.46%), Postives = 18/26 (69.23%), Query Frame = 1 Query: 574 GSGALPLYWNYNYGETGEALKVDILT 651 G G + + +NYNYG G+A+ ++L+ Sbjct: 192 GRGPIQISYNYNYGPAGQAIGSNLLS 217
BLAST of BQ623244 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 4.945e-12 Identity = 34/109 (31.19%), Postives = 51/109 (46.79%), Query Frame = 3 Query: 252 QFENLFAKRNTPVAHAVGFWDYHSFITAAALYQPHGFGTSAGKLMGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPNQIYCDDDFKYTYPCTPGVSYHGQ 578 QFE + R+ A GF+ Y +F+ AA + F + ++EVAAFL TS GGP +WG CY + +C + + +PC PG +YH + Sbjct: 105 QFERMLPHRDDAACPARGFYAYRAFVAAAGAFP--AFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNAR--WPCAPGKAYHAR 202 HSP 2 Score: 30.0314 bits (66), Expect = 4.945e-12 Identity = 11/23 (47.83%), Postives = 16/23 (69.57%), Query Frame = 1 Query: 580 GALPLYWNYNYGETGEALKVDIL 648 G + + +NYNYG GEA+ D+L Sbjct: 203 GPMQIAYNYNYGAAGEAIGADLL 225
BLAST of BQ623244 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 4.945e-12 Identity = 34/109 (31.19%), Postives = 51/109 (46.79%), Query Frame = 3 Query: 252 QFENLFAKRNTPVAHAVGFWDYHSFITAAALYQPHGFGTSAGKLMGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPNQIYCDDDFKYTYPCTPGVSYHGQ 578 QFE + R+ A GF+ Y +F+ AA + F + ++EVAAFL TS GGP +WG CY + +C + + +PC PG +YH + Sbjct: 105 QFERMLPHRDDAACPARGFYAYRAFVAAAGAFP--AFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNAR--WPCAPGKAYHAR 202 HSP 2 Score: 30.0314 bits (66), Expect = 4.945e-12 Identity = 11/23 (47.83%), Postives = 16/23 (69.57%), Query Frame = 1 Query: 580 GALPLYWNYNYGETGEALKVDIL 648 G + + +NYNYG GEA+ D+L Sbjct: 203 GPMQIAYNYNYGAAGEAIGADLL 225 The following BLAST results are available for this feature:
BLAST of BQ623244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623244 ID=BQ623244; Name=BQ623244; organism=Citrus sinensis; type=EST; length=677bpback to top |