BQ623256

Overview
NameBQ623256
Unique NameBQ623256
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623256 vs. ExPASy Swiss-Prot
Match: PSBP_SINAL (Oxygen-evolving enhancer protein 2, chloroplastic OS=Sinapis alba GN=PSBP PE=2 SV=2)

HSP 1 Score: 306.605 bits (784), Expect = 8.203e-83
Identity = 155/219 (70.78%), Postives = 187/219 (85.39%), Query Frame = 1
Query:   61 CFLHHHALSTTPARTS---SSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDPNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSEGGFDPDAVATANILEASVR----PPYYFLSVLTRTADGDEGGKHQ 696
            CFLH  AL+++ AR+S   SSQR+VS  K   +VC+AQ+    E+D S VSRRLALT+L+GAAAVGSKVSPADAAYGE+ANVFGKPK NTDF  Y+GDGF++ +P+KWNPS+E E+PGQVLRYEDNFD  SN++V++TPTDKKSITDYGSPEEFLS+V+YLLGKQAY G+T+SEGGFD +AVATANILE +++     PYY+LSVLTRTADGDEGGKHQ
Sbjct:    6 CFLHQSALASSTARSSPSSSSQRYVSISK---LVCKAQQ--THEEDNSTVSRRLALTLLVGAAAVGSKVSPADAAYGEAANVFGKPKKNTDFTAYSGDGFQVQVPAKWNPSREVEYPGQVLRYEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFGETASEGGFDNNAVATANILETNIQDVGGKPYYYLSVLTRTADGDEGGKHQ 219          
BLAST of BQ623256 vs. ExPASy Swiss-Prot
Match: PSBP_BRAJU (Oxygen-evolving enhancer protein 2, chloroplastic (Fragment) OS=Brassica juncea GN=PSBP PE=2 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 1.832e-74
Identity = 135/176 (76.70%), Postives = 157/176 (89.20%), Query Frame = 1
Query:  181 EDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDPNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSEGGFDPDAVATANILEASVR----PPYYFLSVLTRTADGDEGGKHQ 696
            EDD S VSRRLALT+L+GAAAVGSKVSPADAAYGE+ANVFGKPKTNTDF   NGDGF++ +P+KWNPS+E E+PGQVLRYEDNFD  SN++V++TPTDKKSITDYGSPEEFLS+V+YLLGKQAY G+T+ EGGFD +AVATANILE +++     PYY+LSVLTRTAD DEGGKHQ
Sbjct:    1 EDDTSTVSRRLALTLLVGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFTAINGDGFQVQVPAKWNPSREVEYPGQVLRYEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFGETACEGGFDNNAVATANILETNIQDVGGKPYYYLSVLTRTADEDEGGKHQ 176          
BLAST of BQ623256 vs. ExPASy Swiss-Prot
Match: PSBP_NARPS (Oxygen-evolving enhancer protein 2, chloroplastic OS=Narcissus pseudonarcissus GN=PSBP PE=2 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 2.645e-73
Identity = 145/225 (64.44%), Postives = 165/225 (73.33%), Query Frame = 1
Query:   61 CFLHHHA-------LSTTPARTS---SSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDPNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSEGGFDPDAVATANILEASV----RPPYYFLSVLTRTADGDEGGKH 693
            CFLHHHA       LS T + T+     Q H + ++  +  C  +  A+       +SRRLALT+LIG AA+GS+VS ADAAYGESANVFGKPKTNTDF    GDGFK+ IPSKWNPSKE EFPGQVLRYEDNFD  SNV V++ PTDKKSI DYGSPE+FLS+VDYLLGKQAY GKT SEGGF+P+AV TANILE S        YY + VLTRTADGDEGGKH
Sbjct:    6 CFLHHHAPSPATSNLSRTRSATNRDEQQQEHSARLQSPEADCATENDAL-------LSRRLALTILIGGAALGSRVSAADAAYGESANVFGKPKTNTDFQTVTGDGFKILIPSKWNPSKEVEFPGQVLRYEDNFDTTSNVGVMVNPTDKKSIKDYGSPEQFLSQVDYLLGKQAYFGKTISEGGFEPNAVRTANILETSTPVVGGKDYYSIHVLTRTADGDEGGKH 223          
BLAST of BQ623256 vs. ExPASy Swiss-Prot
Match: PSBP_WHEAT (Oxygen-evolving enhancer protein 2, chloroplastic OS=Triticum aestivum GN=PSBP PE=2 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 1.895e-71
Identity = 141/218 (64.68%), Postives = 167/218 (76.61%), Query Frame = 1
Query:   61 CFLHHHALSTTPARTSSSQRHVSNIKPTQI-VCRAQKQAVQEDDGSAV-SRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDPNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSEGGFDPDAVATANILEASV----RPPYYFLSVLTRTADGDEGGKHQ 696
            CFLH      + AR ++S R    +  TQ+ VC+AQK      D + V SRR AL++L GAAA+  KVSPA AAYGE+ANVFGK K NTDF+ Y+G+GFKL IP+KWNPSKEREFPGQVLRYEDNFD  SN+SVII PT KK+ITDYGSPEEFLS+V +LLG+Q+Y GKT SEGGF+ DAVATAN+LE+S        YY ++VLTRTADGDEGGKHQ
Sbjct:    6 CFLHQ-----STARLAASARPAPAVGRTQLFVCKAQKNDEAASDAAVVTSRRAALSLLAGAAAIAVKVSPAAAAYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQVLRYEDNFDATSNLSVIINPTTKKTITDYGSPEEFLSQVGFLLGQQSYGGKTDSEGGFESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQ 218          
BLAST of BQ623256 vs. ExPASy Swiss-Prot
Match: PSBP_CHLRE (Oxygen-evolving enhancer protein 2, chloroplastic OS=Chlamydomonas reinhardtii GN=PSBP PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 8.279e-51
Identity = 102/174 (58.62%), Postives = 126/174 (72.41%), Query Frame = 1
Query:  190 GSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDPNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSEGGFDPDAVATANILEASVR-----PPYYFLSVLTRTADGDEGGKHQ 696
            GS VSRR AL    GAAA+ S  SPA+AAYG+SANVFGK    + F+PY GDGF L +P+KWNPSKE +FPG +LRYEDNFD  +N+ VI   TDKK+I D+GS ++FL  V YLLGKQAYSG+T SEGGF P+ V+ A++L+ S         YY   +L R+ADGDEGG+HQ
Sbjct:   31 GSDVSRRAALAGFAGAAALVSS-SPANAAYGDSANVFGKVTNKSGFVPYAGDGFALLLPAKWNPSKENDFPGVILRYEDNFDAVNNLVVIAQDTDKKAIADFGSQDKFLESVSYLLGKQAYSGETQSEGGFAPNRVSAASLLDVSTTTDKKGKTYYKYELLVRSADGDEGGRHQ 203          
BLAST of BQ623256 vs. ExPASy Swiss-Prot
Match: PSBP2_ARATH (Putative oxygen-evolving enhancer protein 2-2 OS=Arabidopsis thaliana GN=PSBP2 PE=5 SV=3)

HSP 1 Score: 130.568 bits (327), Expect = 8.057e-30
Identity = 65/84 (77.38%), Postives = 74/84 (88.10%), Query Frame = 1
Query:  457 IITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSEGGFDPDAVATANILEASVR----PPYYFLSVLTRTADGDEGGKHQ 696
            +ITPTDKKSITDYGSPE+FLS+V+YLLGKQAY G+T+SEGGFD +AVATANILE S +      YY+LSVLTRTADGDEGGKHQ
Sbjct:    1 MITPTDKKSITDYGSPEQFLSQVNYLLGKQAYVGETASEGGFDANAVATANILETSTQEIGGKEYYYLSVLTRTADGDEGGKHQ 84          
The following BLAST results are available for this feature:
BLAST of BQ623256 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
PSBP_SINAL8.203e-8370.78Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP_BRAJU1.832e-7476.70Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP_NARPS2.645e-7364.44Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP_WHEAT1.895e-7164.68Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP_CHLRE8.279e-5158.62Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP2_ARATH8.057e-3077.38Putative oxygen-evolving enhancer protein 2-2 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00347 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00347 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623256 ID=BQ623256; Name=BQ623256; organism=Citrus sinensis; type=EST; length=697bp
GTGAACGAAAAAAAAAAAAAAAGGAAGAGAGCGGAAAAGAAAAAATGGCT
TCAACCTCAATGCTTCTTGCACCACCATGCACTCTCTACTACACCAGCAA
GAACATCATCATCTCAGCGCCACGTGTCAAACATCAAGCCCACCCAGATT
GTCTGCCGTGCGCAGAAGCAAGCTGTCCAAGAAGATGACGGCAGCGCCGT
CTCCCGCCGTTTGGCTCTGACGGTGCTCATTGGTGCTGCTGCCGTCGGCT
CCAAGGTCTCTCCTGCCGACGCTGCCTACGGTGAATCTGCCAATGTGTTT
GGTAAGCCAAAGACCAACACTGACTTCTTGCCATACAATGGAGATGGATT
CAAGCTGTCGATTCCCTCAAAATGGAACCCCAGCAAAGAGAGAGAGTTCC
CTGGTCAGGTTCTTAGATACGAAGACAACTTTGATCCCAACAGCAATGTC
TCCGTCATAATCACCCCAACTGACAAGAAATCCATCACTGACTACGGTTC
CCCCGAGGAATTCCTCAGTAAGGTGGACTACTTGCTGGGAAAACAAGCCT
ATTCCGGCAAAACTTCGTCTGAGGGTGGTTTCGACCCTGATGCTGTGGCA
ACAGCTAACATCTTGGAGGCTTCAGTCCGACCACCATACTACTTCTTGTC
TGTATTAACAAGAACTGCTGATGGAGATGAAGGTGGCAAGCATCAAC
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