BQ623261

Overview
NameBQ623261
Unique NameBQ623261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length626
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 5.718e-26
Identity = 60/140 (42.86%), Postives = 86/140 (61.43%), Query Frame = 2
Query:  185 SLLTPFADRPRSLLSDLWTERLADPFRVLEQIPFELERD-ETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKK 601
            SL+  F    RS + D ++  + DPF+     PF      E  A    RVDWKETPE H    D+PG+K++E+K+E+++ RVL++SG          D WHRVERS GK  R+F+LP+N  +D V+A +ENGVLT+++ K
Sbjct:    2 SLIPSFFGGRRSSVFDPFSLDVWDPFK---DFPFPSSLSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAKVDQVKASMENGVLTVTVPK 138          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HS174_ORYSJ (17.4 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.4 PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 5.718e-26
Identity = 56/127 (44.09%), Postives = 78/127 (61.42%), Query Frame = 2
Query:  230 DLWTERLADPFRVLEQIPFELERDETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSP 610
            DLW      PF       F     +  A + AR+DWKETPE H    DVPG+K++E+K+EVE+  VL++SG          D+WHRVERS GKF R+F+LP+N   + ++A +ENGVLT+++ K  P
Sbjct:   16 DLWDPFDGFPFGSGSGSLFPRANSDAAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEP 142          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HS181_ORYSJ (18.1 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 7.467e-26
Identity = 52/103 (50.49%), Postives = 73/103 (70.87%), Query Frame = 2
Query:  302 ETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSP 610
            ET A + AR+DWKETPE H    DVPG+K++E+K+EVE+  VL++SG          D+WHRVERS GKF R+F+LP+N   + ++A +ENGVLT+++ K  P
Sbjct:   47 ETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEP 149          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HS17A_ORYSJ (17.9 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.9A PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 7.467e-26
Identity = 51/100 (51.00%), Postives = 72/100 (72.00%), Query Frame = 2
Query:  302 ETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKK 601
            ET A + AR+DWKETPE H    DVPG+K++E+K+EV++  +L++SG          DQWHRVERS GKF R+F+LPDN   + ++A +ENGVLT+++ K
Sbjct:   47 ETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPEQIKASMENGVLTVTVPK 146          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.274e-25
Identity = 58/145 (40.00%), Postives = 88/145 (60.69%), Query Frame = 2
Query:  185 SLLTPFADRPRSLLSDLWTERLADPFR------VLEQIPFELERDETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKK 601
            SL+  F    R+ + D ++  + DPF+       L    F     E  A    RVDWKETPE H    D+PG+K++E+K+++E+++VL++SG          D WHRVERS GKF R+F+LP+N  ++ V+A +ENGVLT+++ K
Sbjct:    2 SLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKVEQVKASMENGVLTVTVPK 146          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HS17A_ARATH (17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana GN=HSP17.6A PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.274e-25
Identity = 59/148 (39.86%), Postives = 91/148 (61.49%), Query Frame = 2
Query:  179 NGSLLTPFADRPRSLLSDLWTERLADPFRVLEQIPFELERDETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSPDQIK 622
            N ++  PF+        D+W     DPF+ L+          + A++ ARVDWKET E H    D+PG+K++E+K+E+E++ VL++SG          D WHRVERS G F R+F+LP+NV +D V+A +ENGVLT+++ K+  ++ K
Sbjct:   15 NNNIFDPFS-------LDVW-----DPFKELQ-----FPSSSSSAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFSRKFRLPENVKMDQVKASMENGVLTVTVPKVETNKKK 145          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HS181_ARATH (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.706e-25
Identity = 60/143 (41.96%), Postives = 86/143 (60.14%), Query Frame = 2
Query:  185 SLLTPFADRPRSLLSDLWTERLADPFRVLEQIPFELERDETM----ALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKK 601
            SL+       RS + D +++ L DPF         L    T     A + ARVDWKETPE H    D+PG+K++E+K+EVE+  VL++SG          D+WHRVER+ GKF R+F+LP+N  ++ V+A +ENGVLT+ + K
Sbjct:    2 SLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPK 144          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HS16B_WHEAT (16.9 kDa class I heat shock protein 2 OS=Triticum aestivum GN=hsp16.9B PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.706e-25
Identity = 60/127 (47.24%), Postives = 81/127 (63.78%), Query Frame = 2
Query:  227 SDLWTERLADPFRVLEQIPFELER--DETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKK 601
            +DLW    ADPF     I   +     ET A + AR+DWKETPE H    D+PGVK++E+K+EVE+  VL VSG          D+WHRVERS GKF R+F+L ++  ++ V+A LENGVLT+++ K
Sbjct:   14 ADLW----ADPFDTFRSIVPAISGGGSETAAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPK 136          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HSP13_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.322e-25
Identity = 58/139 (41.73%), Postives = 86/139 (61.87%), Query Frame = 2
Query:  185 SLLTPFADRPRSLLSDLWTERLADPFRVLEQIPFELERDETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKK 601
            SL+       RS + D ++  + DPF+     P  L   E  A    RVDWKETPE H    D+PG+K++E+K+++E++RVL++SG          D WHRVERS G F R+F+LP+N  ++ V+A +ENGVLT+++ K
Sbjct:    2 SLIPSIFGGRRSNVFDPFSLDVWDPFKDFH-FPTSLSA-ENSAFVNTRVDWKETPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRFRLPENAKVEQVKASMENGVLTVTVPK 138          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HSP12_DAUCA (18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.078e-24
Identity = 57/145 (39.31%), Postives = 87/145 (60.00%), Query Frame = 2
Query:  170 GSSNGSLLTPFADRPRSLLSDLWTERLADPFRVLEQIPFELERDETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKL 604
            GS   ++L PF+        D+W      P         E  + ET A +   +DWKETP+ H    D+PG+K++E+K+EVEE +VL++SG          ++WHRVE S GKF R+F+LP+N ++D V+A +ENGVLT+++ K+
Sbjct:    9 GSRRSNVLNPFS-------LDIWDPFQDYPLITSSGTSSEFGK-ETAAFANTHIDWKETPQAHVFKADLPGLKKEEVKVEVEEGKVLQISGERNKEKEEKNNKWHRVEFSSGKFLRRFRLPENANVDEVKAGMENGVLTVTVPKV 145          
The following BLAST results are available for this feature:
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
HSP11_SOYBN5.718e-2642.8617.3 kDa class I heat shock protein OS=Glycine max... [more]
HS174_ORYSJ5.718e-2644.0917.4 kDa class I heat shock protein OS=Oryza sativ... [more]
HS181_ORYSJ7.467e-2650.4918.1 kDa class I heat shock protein OS=Oryza sativ... [more]
HS17A_ORYSJ7.467e-2651.0017.9 kDa class I heat shock protein OS=Oryza sativ... [more]
HSP16_SOYBN1.274e-2540.0018.5 kDa class I heat shock protein OS=Glycine max... [more]
HS17A_ARATH1.274e-2539.8617.6 kDa class I heat shock protein 1 OS=Arabidops... [more]
HS181_ARATH3.706e-2541.9618.1 kDa class I heat shock protein OS=Arabidopsis... [more]
HS16B_WHEAT3.706e-2547.2416.9 kDa class I heat shock protein 2 OS=Triticum ... [more]
HSP13_SOYBN6.322e-2541.7317.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP12_DAUCA1.078e-2439.3118.0 kDa class I heat shock protein OS=Daucus caro... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00352 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00352 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623261 ID=BQ623261; Name=BQ623261; organism=Citrus sinensis; type=EST; length=626bp
TGTCAATATCTATCTAGCTTCAAGCCTCTCTACCAACAAGCACATTACAT
ATAATACATCAAGCACAAAGCCAAAAAGGAAGGAAGAAATGAGGCAGCAA
CAACAAACACGGCCCTTTAATGTTAATTTGCTGCCAATGCTGCTCTTGGC
AATATTGGCATGTCTTGTGGGCTCATCAAATGGCTCTCTGCTGACGCCCT
TCGCTGATCGTCCGAGGAGTCTGTTATCCGATCTCTGGACAGAACGTTTG
GCAGACCCCTTCCGGGTGCTAGAGCAAATCCCATTTGAGCTCGAGAGGGA
CGAGACCATGGCGCTATCTCCCGCTAGAGTGGACTGGAAAGAGACACCGG
AGGGTCACTTCATAATGCTGGATGTACCGGGGGTGAAGAGGGACGAGCTG
AAGATTGAAGTTGAGGAGAATCGCGTGCTGCGAGTGAGCGGAGAGAGGAA
ACGGGAGGAGGAGAAGAAGGGCGATCAGTGGCACAGAGTGGAGAGATCCC
ATGGCAAGTTTTGGAGGCAGTTCAAGCTGCCGGACAATGTGGATTTAGAT
TCTGTACAGGCTAAGCTTGAAAATGGGGTGCTCACTTTGTCCTTGAAAAA
GCTGTCACCTGACCAGATCAAAGGTC
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