BQ623261

Overview
NameBQ623261
Unique NameBQ623261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length626
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.078e-24
Identity = 55/142 (38.73%), Postives = 87/142 (61.27%), Query Frame = 2
Query:  185 SLLTPFADRPRSLLSDLWTERLADPFRVLEQIPFELER--DETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKL 604
            S++  F    RS + D ++  + DPF+    +         ET A     +DWKETP+ H    D+PG+K++E+K+E+EE +VL++SG          D+WHRVERS GKF R+F+LP+N  +D V+A + NGV+T+++ K+
Sbjct:    2 SIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVTSSASEFGKETAAFVNTHIDWKETPQAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLPENAKVDEVKAAMANGVVTVTVPKV 143          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HS177_ORYSJ (17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.408e-24
Identity = 49/109 (44.95%), Postives = 73/109 (66.97%), Query Frame = 2
Query:  284 FELERDETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSP 610
            F     +  A + AR+DWKETPE H    DVPG+K++E+K+EV++  +L++SG          D+WHRVERS GKF R+F+LP+N   + ++A +ENGVLT+++ K  P
Sbjct:   39 FPRANSDAAAFAGARIDWKETPEVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEP 147          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HSP17_ARATH (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.4A PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 2.402e-24
Identity = 53/126 (42.06%), Postives = 79/126 (62.70%), Query Frame = 2
Query:  254 DPFRVLEQIPFE---------LERDETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKL 604
            DPF +    PFE             +  A + A+VDW+ETPE H    DVPG+K++E+K+EVE+  +L++SG          D WHRVERS GKF R+F+LP+N  ++ V+A +ENGVL++++ K+
Sbjct:   17 DPFSLDVWDPFEGFLTPGLTNAPAKDVAAFTNAKVDWRETPEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPENAKVEEVKASMENGVLSVTVPKV 142          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HS219_ORYSJ (21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP21.9 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.098e-24
Identity = 59/135 (43.70%), Postives = 84/135 (62.22%), Query Frame = 2
Query:  248 LADPFRVLEQIPFE--------LERDETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEE-NRVLRVSGXXXXXXXXX-------GDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKL 604
            L DPFRVLEQ P              E  A++ AR DWKETPE H + +DVPGV+R ++++EV+E +RVLRVSG                G +WHR ER+ G+FWR+F++P   D+  V A+L++GVLT+++ K+
Sbjct:   39 LDDPFRVLEQSPLRPAGGVAAAAAAGEPAAVALARCDWKETPEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGERRRAGAAEEEEGERDGVRWHRAERAAGRFWRRFRMPPGADVGRVAARLDDGVLTVTVPKV 173          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HS17C_ARATH (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.557e-23
Identity = 44/101 (43.56%), Postives = 73/101 (72.28%), Query Frame = 2
Query:  302 ETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKL 604
            +  A + A+VDW+ETPE H    D+PG++++E+K+EVE+  +L++SG          D+WHRVERS GKF R+F+LP+N  ++ ++A +ENGVL++++ K+
Sbjct:   43 DVAAFTNAKVDWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPENAKMEEIKASMENGVLSVTVPKV 143          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HS189_ORYSJ (18.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.9 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 8.544e-22
Identity = 47/95 (49.47%), Postives = 65/95 (68.42%), Query Frame = 2
Query:  317 SPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKK 601
            S A +DWKET   H  M D+PGV+R+E+++EVEE +VLR+SG         G++WHRVERS  +F R  +LP N + D V A L+NGVLT+++ K
Sbjct:   68 STASMDWKETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHAALDNGVLTITIPK 162          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HS166_ORYSJ (16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP16.6 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.240e-21
Identity = 52/127 (40.94%), Postives = 74/127 (58.27%), Query Frame = 2
Query:  230 DLWTERLADPFRVLEQIPFELERDETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXG---DQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKK 601
            D W +  ADPF  +  +      +    L+  RVDWKETP  H    D+PGV++D+ K+EVE+  VL +SG         G   ++WH VERS GKF R+F+LP    +D V A ++NGVLT+++ K
Sbjct:   16 DFWAD--ADPFGAVRSLA-----ERCPVLTNVRVDWKETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASMDNGVLTVTVPK 135          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.145e-16
Identity = 42/107 (39.25%), Postives = 70/107 (65.42%), Query Frame = 2
Query:  302 ETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSPDQIK 622
            + MA +PA  D KE P  +  ++D+PG+K  ++K++VEE+ VL +SG         G ++ R+ER  GKF R+F LP+N + D++ A  ++GVLT++++KL P + K
Sbjct:   41 KAMAATPA--DVKEYPNSYVFVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKFIRMERRVGKFMRKFSLPENANTDAISAVCQDGVLTVTVQKLPPPEPK 145          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HSP22_MAIZE (17.8 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.931e-15
Identity = 43/105 (40.95%), Postives = 66/105 (62.86%), Query Frame = 2
Query:  308 MALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSPDQIK 622
            MA +PA  D KE P  +  ++D+PG+   +++++VE+ RVL VSG           ++ R+ER  GKF R+F LPDN D+D V A   +GVLT++++KL P + K
Sbjct:   52 MAATPA--DVKELPGAYAFVVDMPGLGTGDIRVQVEDERVLVVSGERRREEREDDAKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVTVEKLPPPEPK 154          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HSP21_PEA (17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.746e-15
Identity = 40/107 (37.38%), Postives = 68/107 (63.55%), Query Frame = 2
Query:  302 ETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSPDQIK 622
            + MA +PA  D KE P  +  M+D+PGVK  ++K++VE+  VL +SG         G ++ ++ER  GK  R+F LP+N +++++ A  ++GVLT+++ KL P + K
Sbjct:   38 KAMAATPA--DVKEHPNSYVFMVDMPGVKSGDIKVQVEDENVLLISGERKREEEKEGVKYLKMERRIGKLMRKFVLPENANIEAISAISQDGVLTVTVNKLPPPEPK 142          
The following BLAST results are available for this feature:
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
HSP11_DAUCA1.078e-2438.7317.8 kDa class I heat shock protein OS=Daucus caro... [more]
HS177_ORYSJ1.408e-2444.9517.7 kDa class I heat shock protein OS=Oryza sativ... [more]
HSP17_ARATH2.402e-2442.0617.4 kDa class I heat shock protein OS=Arabidopsis... [more]
HS219_ORYSJ4.098e-2443.7021.9 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HS17C_ARATH1.557e-2343.5617.6 kDa class I heat shock protein 3 OS=Arabidops... [more]
HS189_ORYSJ8.544e-2249.4718.9 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HS166_ORYSJ4.240e-2140.9416.6 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HSP21_SOLPE3.145e-1639.2517.3 kDa class II heat shock protein OS=Solanum pe... [more]
HSP22_MAIZE5.931e-1540.9517.8 kDa class II heat shock protein OS=Zea mays P... [more]
HSP21_PEA7.746e-1537.3817.1 kDa class II heat shock protein OS=Pisum sati... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00352 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00352 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623261 ID=BQ623261; Name=BQ623261; organism=Citrus sinensis; type=EST; length=626bp
TGTCAATATCTATCTAGCTTCAAGCCTCTCTACCAACAAGCACATTACAT
ATAATACATCAAGCACAAAGCCAAAAAGGAAGGAAGAAATGAGGCAGCAA
CAACAAACACGGCCCTTTAATGTTAATTTGCTGCCAATGCTGCTCTTGGC
AATATTGGCATGTCTTGTGGGCTCATCAAATGGCTCTCTGCTGACGCCCT
TCGCTGATCGTCCGAGGAGTCTGTTATCCGATCTCTGGACAGAACGTTTG
GCAGACCCCTTCCGGGTGCTAGAGCAAATCCCATTTGAGCTCGAGAGGGA
CGAGACCATGGCGCTATCTCCCGCTAGAGTGGACTGGAAAGAGACACCGG
AGGGTCACTTCATAATGCTGGATGTACCGGGGGTGAAGAGGGACGAGCTG
AAGATTGAAGTTGAGGAGAATCGCGTGCTGCGAGTGAGCGGAGAGAGGAA
ACGGGAGGAGGAGAAGAAGGGCGATCAGTGGCACAGAGTGGAGAGATCCC
ATGGCAAGTTTTGGAGGCAGTTCAAGCTGCCGGACAATGTGGATTTAGAT
TCTGTACAGGCTAAGCTTGAAAATGGGGTGCTCACTTTGTCCTTGAAAAA
GCTGTCACCTGACCAGATCAAAGGTC
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