BQ623265

Overview
NameBQ623265
Unique NameBQ623265
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length661
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623265 vs. ExPASy Swiss-Prot
Match: PDIA4_CAEEL (Probable protein disulfide-isomerase A4 OS=Caenorhabditis elegans GN=C14B9.2 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 8.876e-20
Identity = 54/148 (36.49%), Postives = 83/148 (56.08%), Query Frame = 1
Query:   52 NIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLD-NLVIAKIDASANEHP-KLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKDQSPKDE 489
            N+E F  ++  G    ++KS P P +    V+ VVG  FD +V +  KDVL+E Y PWC  C++   +  +LA+  K    N+V+AK+DA+ N+ P +  VE +PT+ F PAG K+ PIK S     +++  F+ +    K    KDE
Sbjct:  471 NLEAFMKQISSGKAKAHVKSAPAPKDDKGPVKTVVGSNFDKIVNDESKDVLIEFYAPWCGHCKSFESKYVELAQALKKTQPNVVLAKMDATINDAPSQFAVEGFPTIYFAPAGKKSEPIKYSGNRDLEDLKKFMTKH-GVKSFQKKDE 617          
BLAST of BQ623265 vs. ExPASy Swiss-Prot
Match: PDI_DROME (Protein disulfide-isomerase OS=Drosophila melanogaster GN=Pdi PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.514e-19
Identity = 53/174 (30.46%), Postives = 98/174 (56.32%), Query Frame = 1
Query:   13 ISKFLLESD-LTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNAN-VQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEHPKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKDQSPKDEQWKEKDQAPKDEL 528
            ++K+  ESD L+   IE F  + L G L  +L SQ +P++ + N V+++V   F+ + L+  K VL+E Y PWC  C+  +   ++LA+ +K  +++VIAK+D++ANE   +++  +PT+ ++   D    I  +   +  +   F+    +  D  P +E  +E++   KDEL
Sbjct:  324 MAKYKPESDDLSAETIEAFLKKFLDGKLKQHLLSQELPEDWDKNPVKVLVSSNFESVALDKSKSVLVEFYAPWCGHCKQLAPIYDQLAEKYKDNEDIVIAKMDSTANELESIKISSFPTIKYFRKEDN-KVIDFNLDRTLDDFVKFLDANGEVADSEPVEETEEEEEAPKKDEL 496          
BLAST of BQ623265 vs. ExPASy Swiss-Prot
Match: GSBP_CHICK (Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Gallus gallus PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.514e-19
Identity = 54/190 (28.42%), Postives = 106/190 (55.79%), Query Frame = 1
Query:    4 NKAISKFLLESD-LTPSNIEEFCSRLLHGTLTPYLKS-QPIPDNTNAN-VQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEHPKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIK------------EQLKEKDQSPKDEQWKEKDQAPKDEL 528
            ++ ++K+  E++ LT   + +FC   L G + P+L S +P+P++ +   V+++VGK ++++  +  K+V +E Y PWC  C+  +   ++L + +K  +N+VIAK++++ANE   ++V  +PTL F+PA  +   I  +   +      F++            + L+E  +S  +E   E  +A KDEL
Sbjct:  321 DEELTKYKPETEELTAEKLTQFCHHFLEGKIKPHLMSNEPLPEDWDKQPVKVLVGKNYEEVAFDEKKNVFIEFYAPWCGHCKQLAPMWDRLGEAYKDDENIVIAKMESTANEVEAIKVHSFPTLKFFPASAERTVIDYNGERTLDGYKKFLESGGQDGYGNNDDDDLEEALESDMEED--EDQKAMKDEL 508          
BLAST of BQ623265 vs. ExPASy Swiss-Prot
Match: PDI2_ARATH (Protein disulfide-isomerase 2 OS=Arabidopsis thaliana GN=At1g77510 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.405e-19
Identity = 59/184 (32.07%), Postives = 101/184 (54.89%), Query Frame = 1
Query:    1 DNKAISKFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEHPK--LQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEK-----DQSPKDEQWKEKDQ-APKDEL 528
            DNK   K  +E D     IE +      G +  + KSQPIP   N  V++VV ++ DD+V  S K+VL+E Y PWC  C+  +  ++++A  F+   +++IAK+DA+AN+ P     V+ +PT+ F  A    N +      + ++   F+++  ++K     ++S K E+ K+ ++ A KDEL
Sbjct:  331 DNKKYLKVNVEVD----QIESWFKDFQDGKVAVHKKSQPIPAENNEPVKVVVAESLDDIVFKSGKNVLIEFYAPWCGHCQKLAPILDEVALSFQNDPSVIIAKLDATANDIPSDTFDVKGFPTIYFRSA--SGNVVVYEGDRTKEDFINFVEKNSEKKPTSHGEESTKSEEPKKTEETAAKDEL 508          
BLAST of BQ623265 vs. ExPASy Swiss-Prot
Match: PDIA2_HUMAN (Protein disulfide-isomerase A2 OS=Homo sapiens GN=PDIA2 PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 9.813e-19
Identity = 51/171 (29.82%), Postives = 91/171 (53.22%), Query Frame = 1
Query:   40 LTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNAN-VQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEHPKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFI-------KEQLKEKDQSPKDEQWKEKDQAPKDEL 528
            +T ++I  FC  +L+G + PYL SQ IP + +   V+ +VGK F+ +  +  K+V ++ Y PWC  C+  +   E LA+ ++  ++++IA++DA+ANE     V  +PTL ++PAG     I+  +    +  + F+        E+  E+  +P  E         K+EL
Sbjct:  355 VTAASITAFCHAVLNGQVKPYLLSQEIPPDWDQRPVKTLVGKNFEQVAFDETKNVFVKFYAPWCTHCKEMAPAWEALAEKYQDHEDIIIAELDATANELDAFAVHGFPTLKYFPAGPGRKVIEYKSTRDLETFSKFLDNGGVLPTEEPPEEPAAPFPEPPANSTMGSKEEL 525          
BLAST of BQ623265 vs. ExPASy Swiss-Prot
Match: ERP60_SCHMA (Probable protein disulfide-isomerase ER-60 OS=Schistosoma mansoni PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.282e-18
Identity = 47/153 (30.72%), Postives = 85/153 (55.56%), Query Frame = 1
Query:   13 ISKFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEHPK-LQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEK 468
            + KF L++        +F ++   G LTP++KS+P+P + ++ V+ +V   FD++V N  KDV++  +  WC  C+    + E+ A   K   NLV+A +DA+AN+ P   QV  +PT+ F P G K++P+       + +I  ++  +  E+
Sbjct:  323 LEKFSLDA------FSDFLNKFEDGLLTPHVKSEPLPTDDSSAVKKLVALNFDEIVNNEEKDVMVVFHAGWCGHCKNLMPKYEEAASKVKNEPNLVLAAMDATANDVPSPYQVRGFPTIYFVPKGKKSSPVSYEGGRDTNDIIKYLAREATEE 469          
BLAST of BQ623265 vs. ExPASy Swiss-Prot
Match: PDI_WHEAT (Protein disulfide-isomerase OS=Triticum aestivum GN=PDI PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.674e-18
Identity = 59/177 (33.33%), Postives = 92/177 (51.98%), Query Frame = 1
Query:   16 SKFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEHP-KLQVEEYPTLLFY-PAGDKANPIKVSARSSSKNIAAFIKEQLKEKDQSPKDEQWKEKDQAP----KDEL 528
            SK  L+  +    I  +      G LTP+ KS+PIP+  N  V++VV     D+V  S K+VL+E Y PWC  C+  +  +++ A   +  +++VIAKIDA+AN+ P +  V+ YPTL F  P+G K   +      ++  I  +IK+  +   Q+      K  + A     KDEL
Sbjct:  342 SKKFLKEQVEAGQIVAWLKDYFDGKLTPFRKSEPIPEANNEPVKVVVADNIHDVVFKSAKNVLIEFYAPWCGHCKKLAPILDEAAATLQSEEDVVIAKIDATANDVPGEFDVQGYPTLYFVTPSGKK---VSYEGGRTADEIVDYIKKNKETAGQAAAAATEKAAEPAATEPLKDEL 515          
BLAST of BQ623265 vs. ExPASy Swiss-Prot
Match: PDIA2_PONAB (Protein disulfide-isomerase A2 OS=Pongo abelii GN=PDIA2 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.855e-18
Identity = 53/174 (30.46%), Postives = 93/174 (53.45%), Query Frame = 1
Query:   40 LTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNAN-VQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEHPKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIK----------EQLKEKDQSPKDEQWKEKDQAPKDEL 528
            +T ++I  FC  +L+G + PYL SQ +P + +   V+ +VGK F+ +  +  K+V ++ Y PWC  C+  +   E LA+ ++  ++++IA++DA+ANE     V  +PTL ++PAG      KV    S++++  F K          E+  E+  +P  E         K+EL
Sbjct:  355 VTTASITAFCHAVLNGQVKPYLLSQEVPPDWDQRPVKTLVGKNFEQVAFDETKNVFVKFYAPWCTHCKEMAPAWEALAEKYQDHEDVIIAELDATANELDAFAVHGFPTLKYFPAGPGR---KVIEYKSTRDLGTFSKFLDNGGVLPTEEPLEEPAAPFPEPPANSTMGSKEEL 525          
BLAST of BQ623265 vs. ExPASy Swiss-Prot
Match: PDI_YEAST (Protein disulfide-isomerase OS=Saccharomyces cerevisiae GN=PDI1 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.417e-17
Identity = 56/186 (30.11%), Postives = 97/186 (52.15%), Query Frame = 1
Query:   19 KFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHF-KGLDNLVIAKIDASANEHPKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKE---------------QLKEKDQSPKDEQWKEKDQAPKDEL 528
            K +LES    S +++F    L G  +P +KSQ I +N +++V  +VGK  D++V +  KDVL+  Y PWC  C+  +   ++LA  +     +++IAK+D + N+   + +E YPT++ YP G K+  +      S  ++  FIKE               Q K  +++  D +  +++ A  DEL
Sbjct:  341 KIVLESKAIESLVKDF----LKGDASPIVKSQEIFENQDSSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVRGVVIEGYPTIVLYPGGKKSESVVYQGSRSLDSLFDFIKENGHFDVDGKALYEEAQEKAAEEADADAELADEEDAIHDEL 522          
BLAST of BQ623265 vs. ExPASy Swiss-Prot
Match: PDI_HORVU (Protein disulfide-isomerase OS=Hordeum vulgare GN=PDI PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 7.033e-17
Identity = 58/179 (32.40%), Postives = 92/179 (51.40%), Query Frame = 1
Query:   16 SKFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEHP-KLQVEEYPTLLFY-PAGDKANPIKVSARSSSKNIAAFIKEQLKEKDQSPKDEQWKEKDQAP------KDEL 528
            SK  L+  +    I  +      G LTP+ KS+PIP+  N  V++VV     D+V  S K+VL+E Y PWC  C+  +  +++ A   +  +++VIAK+DA+ N+ P +  V+ YPTL F  P+G K   +      ++  I  +I+   K K+ + +     EK   P      KDEL
Sbjct:  341 SKKFLKEHVEAGQIVAWLKDYFDGKLTPFRKSEPIPEANNEPVKVVVADNVHDVVFKSGKNVLIEFYAPWCGHCKKLAPILDEAAATLQSEEDVVIAKMDATENDVPGEFDVQGYPTLYFVTPSGKK---VSYEGGRTADEIVDYIR---KNKETAGQAAAATEKAAEPAATEPLKDEL 513          
The following BLAST results are available for this feature:
BLAST of BQ623265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
PDIA4_CAEEL8.876e-2036.49Probable protein disulfide-isomerase A4 OS=Caenorh... [more]
PDI_DROME1.514e-1930.46Protein disulfide-isomerase OS=Drosophila melanoga... [more]
GSBP_CHICK1.514e-1928.42Dolichyl-diphosphooligosaccharide--protein glycotr... [more]
PDI2_ARATH4.405e-1932.07Protein disulfide-isomerase 2 OS=Arabidopsis thali... [more]
PDIA2_HUMAN9.813e-1929.82Protein disulfide-isomerase A2 OS=Homo sapiens GN=... [more]
ERP60_SCHMA1.282e-1830.72Probable protein disulfide-isomerase ER-60 OS=Schi... [more]
PDI_WHEAT1.674e-1833.33Protein disulfide-isomerase OS=Triticum aestivum G... [more]
PDIA2_PONAB2.855e-1830.46Protein disulfide-isomerase A2 OS=Pongo abelii GN=... [more]
PDI_YEAST1.417e-1730.11Protein disulfide-isomerase OS=Saccharomyces cerev... [more]
PDI_HORVU7.033e-1732.40Protein disulfide-isomerase OS=Hordeum vulgare GN=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00356 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00356 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623265 ID=BQ623265; Name=BQ623265; organism=Citrus sinensis; type=EST; length=661bp
GATAACAAAGCCATTTCAAAGTTTTTGTTGGAGTCAGATCTCACGCCAAG
CAACATAGAAGAGTTTTGCTCAAGGCTTCTGCATGGTACTCTGACGCCTT
ACTTGAAATCACAGCCAATACCAGATAACACAAACGCAAATGTGCAGATT
GTTGTGGGAAAGACATTTGACGACTTGGTTTTGAACAGTCACAAGGATGT
TCTTCTAGAGGTATATACACCATGGTGTGTCACATGTGAGACAACTAGCA
AGCAAATCGAAAAGCTGGCTAAGCACTTCAAGGGTTTAGACAATCTAGTC
ATTGCAAAGATAGATGCTTCTGCAAATGAGCATCCAAAACTGCAGGTTGA
AGAGTACCCAACACTTCTATTCTACCCAGCTGGTGATAAAGCAAATCCGA
TCAAAGTTTCAGCAAGGTCCAGCTCAAAGAACATAGCAGCATTTATCAAA
GAACAATTGAAAGAAAAAGATCAATCCCCAAAAGATGAACAATGGAAAGA
AAAGGATCAAGCTCCCAAAGATGAATTATAGATCTTATAGTGATTTGGAA
TATTGAAACTTTTAACAGAAAAAGGAAAAAGAAAAAAAAAAGGCAAACCA
AGCAGAAGGAGATGAAGCAGGGAAACAATGTGAATCAGTTTATTAGTATA
TTATTAGTAAA
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