BQ623265

Overview
NameBQ623265
Unique NameBQ623265
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length661
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of BQ623265 vs. ExPASy Swiss-Prot
Match: PDILT_MACFA (Protein disulfide-isomerase-like protein of the testis OS=Macaca fascicularis GN=PDILT PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.518e-11
Identity = 39/165 (23.64%), Postives = 81/165 (49.09%), Query Frame = 1 
Query:   37 DLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNAN-VQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEHPKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKDQSPKDEQWKEKDQAPKDEL 528
            D+T  N+++F    L      +  S+ IP + +   V+ +VGK F+ +V +  KDV +  Y PW   C+     +E+L + ++    ++IAKID +AN+   + ++ YP    +P  D    +      + K  + F++  +K   +   +    E+++  ++E+
Sbjct:  353 DITYENLKKFGRSFLSKNAKKHQSSEEIPKHWDQGLVKQLVGKNFNIVVFDKEKDVFVMFYAPWSKKCKMLFPLLEELGRKYQNHSTIIIAKIDITANDIQLVYLDRYPFFRLFPT-DSQQAVLYKGEHTLKGFSDFLESYIKTSIEDEDELLSVEQNEVIEEEV 516
The following BLAST results are available for this feature:
BLAST of BQ623265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
PDILT_MACFA1.518e-1123.64Protein disulfide-isomerase-like protein of the te... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00356 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00356 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623265 ID=BQ623265; Name=BQ623265; organism=Citrus sinensis; type=EST; length=661bp
GATAACAAAGCCATTTCAAAGTTTTTGTTGGAGTCAGATCTCACGCCAAG
CAACATAGAAGAGTTTTGCTCAAGGCTTCTGCATGGTACTCTGACGCCTT
ACTTGAAATCACAGCCAATACCAGATAACACAAACGCAAATGTGCAGATT
GTTGTGGGAAAGACATTTGACGACTTGGTTTTGAACAGTCACAAGGATGT
TCTTCTAGAGGTATATACACCATGGTGTGTCACATGTGAGACAACTAGCA
AGCAAATCGAAAAGCTGGCTAAGCACTTCAAGGGTTTAGACAATCTAGTC
ATTGCAAAGATAGATGCTTCTGCAAATGAGCATCCAAAACTGCAGGTTGA
AGAGTACCCAACACTTCTATTCTACCCAGCTGGTGATAAAGCAAATCCGA
TCAAAGTTTCAGCAAGGTCCAGCTCAAAGAACATAGCAGCATTTATCAAA
GAACAATTGAAAGAAAAAGATCAATCCCCAAAAGATGAACAATGGAAAGA
AAAGGATCAAGCTCCCAAAGATGAATTATAGATCTTATAGTGATTTGGAA
TATTGAAACTTTTAACAGAAAAAGGAAAAAGAAAAAAAAAAGGCAAACCA
AGCAGAAGGAGATGAAGCAGGGAAACAATGTGAATCAGTTTATTAGTATA
TTATTAGTAAA
back to top