BQ623267

Overview
NameBQ623267
Unique NameBQ623267
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1505 contig Csv1_Contig1505:94..739. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_PELPD (Bifunctional protein folD OS=Pelobacter propionicus (strain DSM 2379) GN=folD PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 5.145e-57
Identity = 121/215 (56.28%), Postives = 149/215 (69.30%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            IRSEIA  VR L  K G  PGLAVV+VG  + S+ YVSMK KAC + GI S +  L  + SEAEL++ V  LN  P +HGILVQLPLP  I+ +KVL  IS  KDVDGFHP N+G+L++    P+F PCTP G + +L+ +GV +KGK  VVVGRSNIVG PV+++ L   ATVT+ HS T D   +VR AD+VIAA G+  MIKG WIK GA V
Sbjct:   14 IRSEIASGVRELQGK-GVTPGLAVVLVGDDQASRVYVSMKEKACNDAGIFSVEHKLAAETSEAELLALVELLNNDPKIHGILVQLPLPSQIDTDKVLEAISPFKDVDGFHPYNVGRLSV--GKPVFQPCTPYGVMVMLREAGVELKGKEVVVVGRSNIVGKPVAMMCLAEHATVTLCHSRTRDLPDVVRRADVVIAAVGRPEMIKGDWIKEGAVV 225          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_GEOSF (Bifunctional protein folD OS=Geobacter sp. (strain FRC-32) GN=folD PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 2.554e-56
Identity = 120/215 (55.81%), Postives = 147/215 (68.37%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            IR EI  EV  L+ + G  PGLAVV+VG    S+ YVSMK KAC +VGI S +  LP + +E EL+  + +LN    +HGILVQLPLPK IN EKVL  IS EKD DGFHP N+G+L +    PLF PCTP G + +LK +GV + GK  VVVGRSNIVG PV+ + L+ +ATVT+ HS T D  + V  AD+VIAA GQ  MIKG+WIK GA V
Sbjct:   14 IRGEITAEVAKLAAQ-GITPGLAVVLVGEDPASKVYVSMKEKACKDVGIFSDEYKLPAETTEEELLQLIDKLNKDRKIHGILVQLPLPKQINTEKVLEAISPEKDADGFHPYNVGRLVI--GKPLFQPCTPYGVMVMLKETGVDLAGKEVVVVGRSNIVGKPVAFMCLQQNATVTLCHSKTRDLAAKVAMADVVIAAVGQPEMIKGAWIKKGAVV 225          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_CLOTH (Bifunctional protein folD OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=folD PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 7.430e-56
Identity = 114/218 (52.29%), Postives = 152/218 (69.72%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKV---PGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            + ++I EE+++  E   K    PGLAV+IVG    S+ YV+ K+KACAE+GI+SF+  L E  ++ ELI  +H+LN    V GILVQLPLPKHI+EEKV+  I   KDVD FHP+N+GKL +   +P FLPCTP G +EL+K SG+ I GK  VVVGRSNIVG P+++LLL  + TVT+ HS T + + + + ADI++ A G+   IKGS IKPGA V
Sbjct:   11 LSTKIKEELKIEVEDLKKNNINPGLAVIIVGNDPASRVYVNSKKKACAEIGIESFEYALEENTTQEELIELIHKLNKDDKVSGILVQLPLPKHIDEEKVIYAIDPSKDVDAFHPVNVGKLMI--GNPDFLPCTPAGVMELIKESGIDITGKECVVVGRSNIVGKPMAMLLLAQNGTVTVCHSRTQNIDEVCKRADILVVAVGKPEFIKGSSIKPGAVV 226          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_LARHH (Bifunctional protein folD OS=Laribacter hongkongensis (strain HLHK9) GN=folD PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.267e-55
Identity = 109/211 (51.66%), Postives = 147/211 (69.67%), Query Frame = 1
Query:   13 IAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +A  V+  +E   + P LAV++VG    S+ YV  K+K C + GI+S   DLPE  SEA+L++ V ELNA  DV GILVQLPLP+HIN E V+  I+ +KDVDGFHP N+G+LA+K   PL  PCTP+G + +L+ +G++++GK AVV+G+SNIVG P++L LL   ATVTI HS T D    V+ ADI++AA G    +KG W+KPGA V
Sbjct:   19 VAAGVKARTEAGKRAPALAVILVGNNPASEVYVRNKKKGCEKAGIQSLAYDLPESTSEADLLALVDELNARSDVDGILVQLPLPRHINPETVIERINPKKDVDGFHPYNMGRLAVK--MPLLRPCTPRGVMIMLEHAGISVEGKHAVVIGQSNIVGRPMALELLMERATVTICHSRTRDLPEEVKRADIIVAAVGIPRFVKGDWVKPGAVV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_MOOTA (Bifunctional protein folD OS=Moorella thermoacetica (strain ATCC 39073) GN=folD PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 8.214e-55
Identity = 117/215 (54.42%), Postives = 148/215 (68.84%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +R+E+ EEV  L  + G  PGLAVV+VG    SQ YV  K +AC EVGI S    LP   S+AEL+  + +LN  P +HGILVQLPLP HI+E+KV+  I+LEKDVDGF P N+G L +   D  F PCTP GC+ LL+++G+  KGK+AVVVGRSNIVG PV+++LL   ATVTI HS T D  +  R+ADI+IAA G+  +I G  IK GA V
Sbjct:   15 VRAEVKEEVSRLKAE-GINPGLAVVLVGEDPASQVYVRNKHRACEEVGIYSEVHRLPAATSQAELLKLIDQLNKDPKIHGILVQLPLPDHIDEKKVIDAIALEKDVDGFSPANVGNLVI--GDKCFYPCTPHGCMVLLEKAGIDPKGKKAVVVGRSNIVGKPVAMMLLARHATVTICHSRTRDLAAECRQADILIAAVGKPELITGDMIKEGAVV 226          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_GEOKA (Bifunctional protein folD OS=Geobacillus kaustophilus GN=folD PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 8.214e-55
Identity = 116/215 (53.95%), Postives = 144/215 (66.98%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            IR+ +A+E   L    G  PGLAV++VG    S SYV  K+KACAEVGI+SF    P  + E  L++K+ ELN  P VHGILVQLPLP HI E  V+  I+ EKDVDGFHP+N+GK+ +  R   FLPCTP G L +++ +G+ I GK  VVVGRSNIVG PV  L L+  ATVT  HS TPD  +I R+ADI+I A G+A +I    IKPGA V
Sbjct:   15 IRTALADEAAQLKAD-GVEPGLAVILVGDDPASHSYVKGKQKACAEVGIRSFLYTFPAAIDEETLLAKIRELNVDPAVHGILVQLPLPDHICEWSVIETIAPEKDVDGFHPINVGKMMIGQR--AFLPCTPHGILVMVQSAGIDIAGKHVVVVGRSNIVGKPVGQLFLREHATVTYTHSKTPDLAAITRQADILIVAVGKARLIGPEHIKPGAVV 226          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_ACTSZ (Bifunctional protein folD OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=folD PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.073e-54
Identity = 111/214 (51.87%), Postives = 143/214 (66.82%), Query Frame = 1
Query:    4 RSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +SE+A ++R       +VPGLAV++VG    SQ YV  KRK+CAE+GI S   DLPE  +EAEL+S + +LN  P+V GILVQLPLPKHI+  KV+  I+  KDVDGFHP N+G+L    R P    CTP G ++LL+ +G  + G  AV+VG SNIVG P+++ LL A  TVT+ H  T D E  VR ADI++ A G+A  I G WIKPGA V
Sbjct:   16 KSEVAGQIRRYISLGRRVPGLAVILVGSDPASQVYVGSKRKSCAEIGIDSKSYDLPETTTEAELLSIIDDLNRNPNVDGILVQLPLPKHIDSTKVIERIAPNKDVDGFHPYNVGRLCQ--RIPTLRACTPYGIMKLLETTGQDLHGLHAVIVGASNIVGRPMAMELLLAGCTVTVTHRFTRDLEEHVRRADILVVAVGKAEFINGDWIKPGATV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_LYSSC (Bifunctional protein folD OS=Lysinibacillus sphaericus (strain C3-41) GN=folD PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.830e-54
Identity = 112/215 (52.09%), Postives = 154/215 (71.63%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            IR+ +AE V  L E+ G  PGLAVV+VG  + S +YV  K+K+C  +G+ S  I LPE+  + EL++++ +LN   D+HGILVQLPLPKHI+E+ V+  I++EKDVDGF P+++GK+ M G++  FLPCTP G ++LL+ SG+ I GK AV+VGRS+IVG P+  LLL+ DATVT  HS TPD  S  ++ADI+IAA G+A  I    +K GA V
Sbjct:   15 IRNAVAERVIRLKEQ-GLTPGLAVVLVGDNQASATYVRNKQKSCEAIGMYSELIKLPEETKQEELLTQIQQLNQREDIHGILVQLPLPKHIDEDTVIATIAVEKDVDGFSPVSVGKM-MLGQE-TFLPCTPFGVMKLLEYSGIEIAGKHAVIVGRSHIVGKPMGQLLLQKDATVTYTHSKTPDLPSFTKQADILIAAVGRANFITKEHVKEGAVV 226          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_PASMU (Bifunctional protein folD OS=Pasteurella multocida GN=folD PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.121e-54
Identity = 108/215 (50.23%), Postives = 146/215 (67.91%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            I+S++A+++   +++  + PGLAV++VG    SQ YV  KRK+CAE+GI+S   DLPE   E+EL++ + ELNA   V GILVQLPLPKHI+  KV+  I+ EKDVDGFHP N+G+L    R P    CTP G ++LL+ +G+ + GK AV+VG SNIVG P++L LL A  TVT+ H  T D    VR+ADI++ A G+   I G WIK GA V
Sbjct:   15 IKSQVAQKIETYTQQGKRSPGLAVILVGADPASQVYVGSKRKSCAEIGIQSKSYDLPETTQESELLALIDELNADTTVDGILVQLPLPKHIDSTKVIERITPEKDVDGFHPYNVGRLCQ--RIPTLRACTPYGVMKLLETTGIDLHGKHAVIVGASNIVGRPMALELLLAGCTVTVTHRFTKDLAHHVRQADILVVAVGKPKFIPGDWIKAGAIV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_PARL1 (Bifunctional protein folD OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=folD PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.121e-54
Identity = 106/215 (49.30%), Postives = 145/215 (67.44%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +R+ +A EV  L + +   PGLAVV+VG    S+ YV  K  A  E G+ SF+  LP + SEA++++KV ELNA P VHG LVQ P+P HI+++ V+  I   KD DG HPLN G+LA     P  +P TP+GC+ + KR+G  + GK AV++GRSN+VG PV+ LLLK + TVTI HS + D  SI R+ADI++AA G+  M++G W+KPGA V
Sbjct:   15 LRARVAVEVARLKKDHSLTPGLAVVLVGNDPASEVYVRNKGIATTEAGMNSFEFKLPAETSEADVLAKVRELNADPAVHGFLVQFPVPNHISQQAVIDAIDPVKDADGLHPLNAGRLA--SGLPAMVPATPEGCVIMAKRAGGDLSGKHAVIIGRSNLVGKPVAQLLLKENCTVTIAHSRSRDLPSIARQADILVAAVGRPGMVRGDWVKPGAVV 227          
The following BLAST results are available for this feature:
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_PELPD5.145e-5756.28Bifunctional protein folD OS=Pelobacter propionicu... [more]
FOLD_GEOSF2.554e-5655.81Bifunctional protein folD OS=Geobacter sp. (strain... [more]
FOLD_CLOTH7.430e-5652.29Bifunctional protein folD OS=Clostridium thermocel... [more]
FOLD_LARHH1.267e-5551.66Bifunctional protein folD OS=Laribacter hongkongen... [more]
FOLD_MOOTA8.214e-5554.42Bifunctional protein folD OS=Moorella thermoacetic... [more]
FOLD_GEOKA8.214e-5553.95Bifunctional protein folD OS=Geobacillus kaustophi... [more]
FOLD_ACTSZ1.073e-5451.87Bifunctional protein folD OS=Actinobacillus succin... [more]
FOLD_LYSSC1.830e-5452.09Bifunctional protein folD OS=Lysinibacillus sphaer... [more]
FOLD_PASMU3.121e-5450.23Bifunctional protein folD OS=Pasteurella multocida... [more]
FOLD_PARL13.121e-5449.30Bifunctional protein folD OS=Parvibaculum lavament... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00358 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00358 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623267 ID=BQ623267; Name=BQ623267; organism=Citrus sinensis; type=EST; length=646bp
ATCCGATCTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGG
CAAGGTGCCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCTC
AAAGCTATGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAG
TCTTTTGACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAG
CAAGGTTCACGAGCTTAACGCAATGCCTGATGTACATGGTATATTGGTTC
AACTTCCATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATA
AGCCTTGAGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCT
CGCAATGAAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGAT
GCCTTGAACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGCT
GTTGTGGTGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGCT
GCTGAAAGCTGATGCCACTGTAACCATAGTCCATTCACATACCCCTGATC
CTGAAAGTATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACAA
GCAATGATGATCAAGGGAAGTTGGATCAAGCCTGGTGCTGCTGTTA
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