BQ623267

Overview
NameBQ623267
Unique NameBQ623267
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_BACC1 (Bifunctional protein folD OS=Bacillus cereus (strain ATCC 10987) GN=folD PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.227e-50
Identity = 105/214 (49.07%), Postives = 146/214 (68.22%), Query Frame = 1
Query:    4 RSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            R+++ EEV  L E+ G VPGLAV++VG    S+SYV  K K C +VGI S  I+ PE ++E  L++++  LN    ++GILVQLPLPKHI E+ ++  IS EKDVDGFHP+++G++ M G+D  FLPCTP G +EL+K + + I GK  VV+GRSNIVG PV  L L  +ATVT  HS T + + + + ADI+I A G+  M+   ++K GA V
Sbjct:   16 RAQLTEEVVKLKEQ-GIVPGLAVILVGEDPASRSYVKGKEKGCEQVGIYSELIEFPETITEERLLAEIDRLNGDDRINGILVQLPLPKHIEEKAIIERISPEKDVDGFHPISVGRM-MTGQD-TFLPCTPHGIVELVKETNLDISGKHVVVIGRSNIVGKPVGQLFLNENATVTYCHSKTQNMKELTKLADILIVAVGRPKMVTADYLKEGAVV 226          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD2_PARDP (Bifunctional protein folD 2 OS=Paracoccus denitrificans (strain Pd 1222) GN=folD2 PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.227e-50
Identity = 108/215 (50.23%), Postives = 138/215 (64.19%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +R  +A  V  L   +G VPGLAVV+VG    SQ YV  K     E G+ SF+  LP + ++AEL++ +  LNA P VHGILVQLPLP+H++ E V+  I  +KDVDGFH LN+G L    +    +PCTP GCL LL+ +   + G  AVVVGRSNIVG P++ LLL    TVTI HS T D   + R ADI++AA G+  MI+G WIKPGA V
Sbjct:   19 VRGRVASAVAGLEAAHGVVPGLAVVLVGEDPASQVYVRNKGIQTREAGMASFEHKLPAETAQAELMALIERLNADPAVHGILVQLPLPRHMDAEAVINAIDPKKDVDGFHVLNVGLLGTGQK--AMVPCTPLGCLMLLRDTLGDLSGLNAVVVGRSNIVGKPMAQLLLNESCTVTIAHSRTRDLAGLCRTADILVAAVGRPRMIRGDWIKPGATV 231          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD1_PARDP (Bifunctional protein folD 1 OS=Paracoccus denitrificans (strain Pd 1222) GN=folD1 PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.227e-50
Identity = 108/215 (50.23%), Postives = 138/215 (64.19%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +R  +A  V  L   +G VPGLAVV+VG    SQ YV  K     E G+ SF+  LP + ++AEL++ +  LNA P VHGILVQLPLP+H++ E V+  I  +KDVDGFH LN+G L    +    +PCTP GCL LL+ +   + G  AVVVGRSNIVG P++ LLL    TVTI HS T D   + R ADI++AA G+  MI+G WIKPGA V
Sbjct:   15 VRGRVASAVAGLEAAHGVVPGLAVVLVGEDPASQVYVRNKGIQTREAGMASFEHKLPAETAQAELMALIERLNADPAVHGILVQLPLPRHMDAEAVINAIDPKKDVDGFHVLNVGLLGTGQK--AMVPCTPLGCLMLLRDTLGDLSGLNAVVVGRSNIVGKPMAQLLLNESCTVTIAHSRTRDLAGLCRTADILVAAVGRPRMIRGDWIKPGATV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: C1TM_YEAST (C-1-tetrahydrofolate synthase, mitochondrial OS=Saccharomyces cerevisiae GN=MIS1 PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.227e-50
Identity = 97/216 (44.91%), Postives = 141/216 (65.28%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKV-PGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            IR +  +E++ +  K+    P L ++ VG R DS +YV MK KA  +  +      LP +++E EL+ K+ ++N    +HG+L+QLPLP+H++E  +   +  +KDVDGFH  N G+LA KG  P F+PCTP GC++LL+ + V + GK AVV+GRS+IVG P++ LL  A+ATVT+ HSHT +   +V +ADIVIAA G    +K  WIK GA V
Sbjct:   47 IREKANDEIQAIKLKHPNFKPTLKIIQVGARPDSSTYVRMKLKASKDSNVDCIIEKLPAEITEVELLKKISDINDDDSIHGLLIQLPLPRHLDETTITNAVDFKKDVDGFHRYNAGELAKKGGKPYFIPCTPYGCMKLLEEAHVKLDGKNAVVLGRSSIVGNPIASLLKNANATVTVCHSHTRNIAEVVSQADIVIAACGIPQYVKSDWIKEGAVV 262          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_WOLPM (Bifunctional protein folD OS=Wolbachia pipientis wMel GN=folD PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.603e-50
Identity = 101/211 (47.87%), Postives = 137/211 (64.93%), Query Frame = 1
Query:   13 IAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +++++ +L  +Y   P L V+++G    SQ YV  K+K    +GI S  I LP  + E ELI K++ELN  P VHGILVQLPLP HI+  +V+  +S+EKDVDGFH  N+GKL +KG     +PCTPKG L L+K     + GK AVV+GRSNIVG P+  LLL+ + TVTI+HS + D      +ADIV+AA G+   ++  WIK GA V
Sbjct:   18 LSQKIDILKREYNIFPCLKVILIGSNPASQVYVRNKQKKAESIGISSETIVLPNNILEDELIEKINELNEDPSVHGILVQLPLPNHISASRVINTVSVEKDVDGFHDENVGKL-VKGEKNCLIPCTPKGSLHLIKSIEENLSGKNAVVIGRSNIVGKPMFYLLLQENCTVTILHSQSKDLAEYCSKADIVVAAVGKPNFVQADWIKKGAIV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_PHOPR (Bifunctional protein folD OS=Photobacterium profundum GN=folD PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.603e-50
Identity = 106/215 (49.30%), Postives = 136/215 (63.26%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +R E+A  V+   E   + PGLAVV+VG    SQ YVS KRKAC EVG  S   DLP    E EL++ ++ELN   ++ GILVQLPLP  I+   +L  I  EKDVDGFHP N+G+L+   R P    CTPKG + LL+R  + ++GK AV+VG SNIVG P++L +L A AT T  H  T D E  +R+ADI++ A G+   I G WIK GA V
Sbjct:   15 VRQEVAARVKARVEAGLRAPGLAVVLVGQDPASQIYVSSKRKACEEVGFISQSFDLPANTKEIELLALINELNTNKEIDGILVQLPLPAGIDTTNILEHIDPEKDVDGFHPYNVGRLSQ--RIPKLRSCTPKGIITLLERYNIPVRGKHAVIVGASNIVGRPMTLEMLLAGATTTTCHRFTQDLEHHIRQADILVVAVGKPHFIPGDWIKEGATV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_NEIMB (Bifunctional protein folD OS=Neisseria meningitidis serogroup B GN=folD PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.603e-50
Identity = 110/211 (52.13%), Postives = 137/211 (64.93%), Query Frame = 1
Query:   13 IAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +AE V    +     P LAVV+VGG   S  YV  K+ AC + GIKS   +LPE  S+ EL++ V  LNA  +V GILVQLPLPKH++ + VL  IS +KDVDGFHP N+G+LA+K   PL  PCTPKG + LL+  G+  KGK+AVVVG SNIVG P +L LL A ATVT+ HS T +    V  ADI++   G    +KG WIKPGA V
Sbjct:   19 VAEAVAQRQQNNLHHPCLAVVLVGGDPASAVYVRNKKTACQKCGIKSLSYELPESTSQEELLALVDRLNADSEVDGILVQLPLPKHLDSQAVLERISPDKDVDGFHPYNVGRLAVK--MPLMRPCTPKGVMTLLEAYGIDPKGKKAVVVGASNIVGRPQALELLLARATVTVCHSATENLTDEVAGADILVVGVGIPNFVKGEWIKPGAVV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_NEIG2 (Bifunctional protein folD OS=Neisseria gonorrhoeae (strain NCCP11945) GN=folD PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.094e-50
Identity = 109/211 (51.66%), Postives = 136/211 (64.45%), Query Frame = 1
Query:   13 IAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            IAE V    +     P LAVV+VGG      YV  K+ AC + GIKS   +LPE  S+ EL++ V  LNA  +V GILVQLPLPKH++ + +L  IS +KDVDGFHP N+G+LA+K   PL  PCTPKG + LL+  G+  KGK+AVVVG SNIVG P +L LL A ATVT+ HS T +    V  ADI++   G    +KG WIKPGA V
Sbjct:   19 IAEAVAQRQQDNLHTPCLAVVLVGGDPAGAVYVRNKKTACQKCGIKSLSYELPESTSQEELLALVDRLNADSEVDGILVQLPLPKHLDSQAILERISPDKDVDGFHPYNVGRLAVK--MPLMRPCTPKGVMTLLEAYGIDPKGKKAVVVGASNIVGRPQALELLLARATVTVCHSATENLADEVAAADILVVGVGIPNFVKGGWIKPGAVV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_NEIG1 (Bifunctional protein folD OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=folD PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.094e-50
Identity = 109/211 (51.66%), Postives = 136/211 (64.45%), Query Frame = 1
Query:   13 IAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            IAE V    +     P LAVV+VGG      YV  K+ AC + GIKS   +LPE  S+ EL++ V  LNA  +V GILVQLPLPKH++ + +L  IS +KDVDGFHP N+G+LA+K   PL  PCTPKG + LL+  G+  KGK+AVVVG SNIVG P +L LL A ATVT+ HS T +    V  ADI++   G    +KG WIKPGA V
Sbjct:   19 IAEAVAQRQQDNLHTPCLAVVLVGGDPAGAVYVRNKKTACQKCGIKSLSYELPESTSQEELLALVDRLNADSEVDGILVQLPLPKHLDSQAILERISPDKDVDGFHPYNVGRLAVK--MPLMRPCTPKGVMTLLEAYGIDPKGKKAVVVGASNIVGRPQALELLLARATVTVCHSATENLADEVAAADILVVGVGIPNFVKGGWIKPGAVV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_LACLS (Bifunctional protein folD OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=folD PE=3 SV=2)

HSP 1 Score: 198.749 bits (504), Expect = 2.094e-50
Identity = 107/215 (49.77%), Postives = 142/215 (66.05%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +++E+  +V  L E  G VPGLAV++VG    SQ YV  K +    +G+ S  + LPE VSE EL+  + + N     HGILVQLPLPKHI+EEKVL  I  EKDVDGFHP+N+G+L     +PL +P TP G +E+ +   V + GKRAVV+GRSNIVG P++ LL+ ADATVTI HS T +   + +EADI++ A G+  MIK   +K GA V
Sbjct:   13 MQAELKVKVDKLKEA-GSVPGLAVILVGEDPASQIYVRNKARQATAIGLNSSVVRLPETVSEKELLELIEQYNQSEQWHGILVQLPLPKHISEEKVLLAIDPEKDVDGFHPMNMGRL--WAGNPLMIPSTPAGIMEMFREYNVELSGKRAVVIGRSNIVGKPMAQLLMMADATVTIAHSRTKNLRELTKEADILVVAIGRDRMIKADDVKDGAVV 224          
The following BLAST results are available for this feature:
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_BACC11.227e-5049.07Bifunctional protein folD OS=Bacillus cereus (stra... [more]
FOLD2_PARDP1.227e-5050.23Bifunctional protein folD 2 OS=Paracoccus denitrif... [more]
FOLD1_PARDP1.227e-5050.23Bifunctional protein folD 1 OS=Paracoccus denitrif... [more]
C1TM_YEAST1.227e-5044.91C-1-tetrahydrofolate synthase, mitochondrial OS=Sa... [more]
FOLD_WOLPM1.603e-5047.87Bifunctional protein folD OS=Wolbachia pipientis w... [more]
FOLD_PHOPR1.603e-5049.30Bifunctional protein folD OS=Photobacterium profun... [more]
FOLD_NEIMB1.603e-5052.13Bifunctional protein folD OS=Neisseria meningitidi... [more]
FOLD_NEIG22.094e-5051.66Bifunctional protein folD OS=Neisseria gonorrhoeae... [more]
FOLD_NEIG12.094e-5051.66Bifunctional protein folD OS=Neisseria gonorrhoeae... [more]
FOLD_LACLS2.094e-5049.77Bifunctional protein folD OS=Lactococcus lactis su... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00358 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00358 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623267 ID=BQ623267; Name=BQ623267; organism=Citrus sinensis; type=EST; length=646bp
ATCCGATCTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGG
CAAGGTGCCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCTC
AAAGCTATGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAG
TCTTTTGACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAG
CAAGGTTCACGAGCTTAACGCAATGCCTGATGTACATGGTATATTGGTTC
AACTTCCATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATA
AGCCTTGAGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCT
CGCAATGAAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGAT
GCCTTGAACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGCT
GTTGTGGTGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGCT
GCTGAAAGCTGATGCCACTGTAACCATAGTCCATTCACATACCCCTGATC
CTGAAAGTATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACAA
GCAATGATGATCAAGGGAAGTTGGATCAAGCCTGGTGCTGCTGTTA
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