BQ623267

Overview
NameBQ623267
Unique NameBQ623267
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_LACLM (Bifunctional protein folD OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=folD PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.094e-50
Identity = 107/215 (49.77%), Postives = 142/215 (66.05%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +++E+  +V  L E  G VPGLAV++VG    SQ YV  K +    +G+ S  + LPE VSE EL+  + + N     HGILVQLPLPKHI+EEKVL  I  EKDVDGFHP+N+G+L     +PL +P TP G +E+ +   V + GKRAVV+GRSNIVG P++ LL+ ADATVTI HS T +   + +EADI++ A G+  MIK   +K GA V
Sbjct:   13 MQAELKVKVDKLKEA-GSVPGLAVILVGEDPASQIYVRNKARQATAIGLNSSVVRLPETVSEKELLELIEQYNQSEQWHGILVQLPLPKHISEEKVLLAIDPEKDVDGFHPMNMGRL--WAGNPLMIPSTPAGIMEMFREYNVELSGKRAVVIGRSNIVGKPMAQLLMMADATVTIAHSRTKNLRELTKEADILVVAIGRDRMIKADDVKDGAVV 224          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_HAES1 (Bifunctional protein folD OS=Haemophilus somnus (strain 129Pt) GN=folD PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.094e-50
Identity = 102/215 (47.44%), Postives = 142/215 (66.05%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            I+  +AE+++   ++  + PGLAV++VG    SQ YV  KR++C E+GI S   DLP + +E EL++ + +LN  P + GILVQLPLPK IN  KV+  IS  KD+DGFHP N+G+L    R P    CTP G ++LL+ +GV + G+ AV+VG SNIVG P++L LL A  TVT+ H  T D +S V +ADI++ A G+  +I G WIK GA V
Sbjct:   15 IKFNVAEKIQHYLQQGKRAPGLAVILVGADPASQVYVGSKRRSCEELGIYSKSYDLPAETTEQELLTLIEQLNQDPQIDGILVQLPLPKKINSTKVIEHISPTKDIDGFHPYNVGRLCQ--RIPTLRACTPLGIMKLLETTGVDLYGQHAVIVGASNIVGRPMALELLLAGCTVTVTHRFTKDLKSHVHQADILVVAVGKPHIIPGEWIKEGAIV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD1_THICR (Bifunctional protein folD 1 OS=Thiomicrospira crunogena (strain XCL-2) GN=folD1 PE=3 SV=2)

HSP 1 Score: 198.749 bits (504), Expect = 2.094e-50
Identity = 103/215 (47.91%), Postives = 138/215 (64.19%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +R  I +EV        K PGLAV++VG    SQ YV  K+ AC + G     + LP + S+AEL++K+ ELN   DVHGI+VQLP+P HI+ E+++  I  +KDVDGFHP N+G+LA   R P   PCTP G + +L ++G+ ++G  AVVVG SNIVG+P++L LL   ATVT+ HS T D    V EAD+V+   G   M+KG WIK GA V
Sbjct:   15 LRDSIQKEVEAQVANGKKPPGLAVILVGEDPASQVYVKNKKIACEKAGFNDVSMVLPAETSQAELLAKIDELNTRDDVHGIIVQLPVPDHIDPEEIIERIDPKKDVDGFHPYNMGRLAT--RLPELAPCTPHGVMTMLAKTGIPLRGLNAVVVGASNIVGVPMALELLNERATVTVCHSATKDLPQKVAEADLVVVGVGIPNMVKGDWIKDGAIV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_SHESW (Bifunctional protein folD OS=Shewanella sp. (strain W3-18-1) GN=folD PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.735e-50
Identity = 108/215 (50.23%), Postives = 136/215 (63.26%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            IR++++E+V    E   +VPGLAV++VG    SQ YV  KRKAC EVG  S   DL    SE EL+S +  LN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +GV   G  AVVVG SNIVG P++L LL A  T T  H  T + E  +R+AD+V+ A G+   I G WIKPGA V
Sbjct:   15 IRTKLSEKVTARKEAGQRVPGLAVILVGADPASQVYVGSKRKACEEVGFISRSYDLETNCSEDELLSLIDSLNDDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRQADLVVVAVGKPGFIPGEWIKPGAIV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_SHEPA (Bifunctional protein folD OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=folD PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.735e-50
Identity = 110/215 (51.16%), Postives = 134/215 (62.33%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            IR+++ ++V    E   +VPGLAV++VG    SQ YV  KRKAC EVG  S   DL    SE  L+S + E N  P + GILVQLPLP+HI E KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + LLK +GV   G  AVVVG SNIVG P+SL LL A  T T  H  T + E  VR AD+V+ A G+   I G WIKPGA V
Sbjct:   15 IRTQLKDKVTARKEAGKRVPGLAVILVGADPASQVYVGSKRKACEEVGFISRSYDLDSSTSEDALLSLIDECNEDPTIDGILVQLPLPEHIEESKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLLKSTGVDTFGLDAVVVGASNIVGRPMSLELLLAGCTTTTCHRFTRNLEDKVRSADLVVVAVGKPGFIPGDWIKPGAIV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_METPP (Bifunctional protein folD OS=Methylibium petroleiphilum (strain PM1) GN=folD PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.735e-50
Identity = 108/215 (50.23%), Postives = 145/215 (67.44%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +R E+A+    L E +G  PGLAV++VG    SQ YV  K KAC + G+ S     P  ++EAEL+++V  LNA P +HGILVQLPLP HI+  +V+  I+  KDVDGFH  + G L M G+ P F PCTP GC+++L+  G   KGK AVV+GRSNIVG P+++LLL+A+ATVT+ HS TPD     R+ADIV+AA G+  ++    +KPGA V
Sbjct:   15 LRHEVAQRAATLRE-HGITPGLAVILVGENPASQVYVRNKVKACHDSGLHSVLEHYPAAMTEAELLARVQALNADPAIHGILVQLPLPPHIDAHRVIETIAPHKDVDGFHVASAGAL-MVGQ-PGFKPCTPYGCMKMLESIGYDPKGKHAVVIGRSNIVGKPMAMLLLQANATVTVCHSATPDLALHTRQADIVVAAVGKRKVLTADMVKPGAVV 226          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_BACWK (Bifunctional protein folD OS=Bacillus weihenstephanensis (strain KBAB4) GN=folD PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.735e-50
Identity = 107/214 (50.00%), Postives = 146/214 (68.22%), Query Frame = 1
Query:    4 RSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            R+++ E+V  L E+ G VPGLAV++VG    S+SYV  K K C +VGI S  I+LPE ++E  L+ ++  LN    ++GILVQLPLPKHI E+ ++  IS EKDVDGFHP+++G++ M G+D  FLPCTP G LEL+K + + I GK  VV+GRSNIVG PV  L L  +ATVT  HS T + + + + ADI+I A G+  M+   +IK GA V
Sbjct:   16 RAQLKEKVVKLKEQ-GIVPGLAVILVGEDPASRSYVKGKEKGCEQVGIYSELIELPETITEERLLVEIDRLNGDDRINGILVQLPLPKHIEEKAIIERISPEKDVDGFHPISVGRM-MTGQD-TFLPCTPHGILELVKETNLDISGKHVVVIGRSNIVGKPVGQLFLNENATVTYCHSKTRNIKELSKLADILIVAVGRPKMVTADYIKEGAVV 226          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD3_PSEMY (Bifunctional protein folD 3 OS=Pseudomonas mendocina (strain ymp) GN=folD3 PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.735e-50
Identity = 109/215 (50.70%), Postives = 146/215 (67.91%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            + +E+AE+VR L    G VP LAVV+VG    SQ YV  K     E GI+S +  LP   +EA L + + ELNA   VHGILVQLPLP HI+E++VL  ++  KDVDGFH  N+G L+ +GR+ L  PCTP GCL LL+ S   + GK AVV+GRSNIVG P++ LLLKA  +VT+VHS + + +++ R+ADIV+AA G+  ++   W+KPGA V
Sbjct:   19 VLAEVAEDVRALKAA-GIVPALAVVLVGDDPASQVYVRNKVLRAEECGIRSLEFKLPADTAEARLQALIAELNADASVHGILVQLPLPAHIDEQRVLQAVTPLKDVDGFHAENVGGLS-QGREVL-TPCTPAGCLRLLQDSCGDLTGKHAVVIGRSNIVGKPMAALLLKAHCSVTVVHSKSANLKTLCRQADIVVAAVGRPRLVDADWLKPGAVV 230          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: C1TC_PONAB (C-1-tetrahydrofolate synthase, cytoplasmic OS=Pongo abelii GN=MTHFD1 PE=2 SV=3)

HSP 1 Score: 198.364 bits (503), Expect = 2.735e-50
Identity = 107/218 (49.08%), Postives = 142/218 (65.14%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKY-GKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKH--INEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            IR+ +  +V  L E+  G  PGLA+++VG R DS  Y+++K KA  E+GIK+  I LP   +E+E+I  +  LN    VHG LVQLPL     IN E+V+  I+ EKDVDG   ++ GKLA    +  F+PCTPKGCLEL+K +GV I G+ AVVVGRS IVG P+  LLL  +ATVT  HS T + +  V + DI++ A G+  M+KG WIKPGA V
Sbjct:   16 IRARLKNQVTQLKEQVPGFTPGLAILLVGNRDDSNLYINVKLKAAEEIGIKATHIKLPRTTTESEVIKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKDVDGLTSISAGKLARGDLNDCFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTANLDEEVNKGDILVVATGRPEMVKGEWIKPGAIV 233          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_VIBHB (Bifunctional protein folD OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=folD PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.571e-50
Identity = 110/215 (51.16%), Postives = 134/215 (62.33%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +RSE+A  V+   E   + PGLAVV+VG    SQ YV  KR+AC EVG  S   DLP   SE EL++ + ELN   ++ GILVQLPLP  I+   VL  I  EKDVDGFHP N+G+LA   R P    CTPKG + LL R  + ++GK AVVVG SNIVG P++L LL A  T T  H  T D E  VR+AD+V+ A G+   I G WIK GA V
Sbjct:   15 VRSEVAARVKARVEAGLRAPGLAVVLVGEDPASQVYVGSKRRACEEVGFVSKSFDLPATTSEEELLALIDELNNDAEIDGILVQLPLPAGIDATHVLERIHPEKDVDGFHPYNVGRLAQ--RIPKLRSCTPKGIITLLDRYNIELRGKHAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKDLEGHVRQADLVVVAVGKPNFIPGEWIKKGAVV 227          
The following BLAST results are available for this feature:
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_LACLM2.094e-5049.77Bifunctional protein folD OS=Lactococcus lactis su... [more]
FOLD_HAES12.094e-5047.44Bifunctional protein folD OS=Haemophilus somnus (s... [more]
FOLD1_THICR2.094e-5047.91Bifunctional protein folD 1 OS=Thiomicrospira crun... [more]
FOLD_SHESW2.735e-5050.23Bifunctional protein folD OS=Shewanella sp. (strai... [more]
FOLD_SHEPA2.735e-5051.16Bifunctional protein folD OS=Shewanella pealeana (... [more]
FOLD_METPP2.735e-5050.23Bifunctional protein folD OS=Methylibium petroleip... [more]
FOLD_BACWK2.735e-5050.00Bifunctional protein folD OS=Bacillus weihenstepha... [more]
FOLD3_PSEMY2.735e-5050.70Bifunctional protein folD 3 OS=Pseudomonas mendoci... [more]
C1TC_PONAB2.735e-5049.08C-1-tetrahydrofolate synthase, cytoplasmic OS=Pong... [more]
FOLD_VIBHB3.571e-5051.16Bifunctional protein folD OS=Vibrio harveyi (strai... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00358 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00358 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623267 ID=BQ623267; Name=BQ623267; organism=Citrus sinensis; type=EST; length=646bp
ATCCGATCTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGG
CAAGGTGCCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCTC
AAAGCTATGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAG
TCTTTTGACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAG
CAAGGTTCACGAGCTTAACGCAATGCCTGATGTACATGGTATATTGGTTC
AACTTCCATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATA
AGCCTTGAGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCT
CGCAATGAAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGAT
GCCTTGAACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGCT
GTTGTGGTGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGCT
GCTGAAAGCTGATGCCACTGTAACCATAGTCCATTCACATACCCCTGATC
CTGAAAGTATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACAA
GCAATGATGATCAAGGGAAGTTGGATCAAGCCTGGTGCTGCTGTTA
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