BQ623267

Overview
NameBQ623267
Unique NameBQ623267
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_SHEWM (Bifunctional protein folD OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=folD PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.571e-50
Identity = 107/215 (49.77%), Postives = 136/215 (63.26%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            IR+++ E+V    E   +VPGLAV++VG    SQ YV  KR+AC EVG  S   DL    +E +L+S + E N  P + GILVQLPLP+HI E KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +GV   G  A+VVG SNIVG P+SL LL A  T T  H  T + E  VR+AD+V+ A G+   I G WIKPGA V
Sbjct:   15 IRTQLKEKVTARKEAGKRVPGLAVILVGADPASQVYVGSKRRACEEVGFLSRSYDLESSTTEEQLLSLIDECNQDPAIDGILVQLPLPEHIEESKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYGLDALVVGASNIVGRPMSLELLLAGCTTTTCHRFTRNLEQKVRQADLVVVAVGKPGFIPGEWIKPGALV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_CUPTR (Bifunctional protein folD OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=folD PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.571e-50
Identity = 112/215 (52.09%), Postives = 144/215 (66.98%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            IRSE A+    L+E+ G  PGLAVV+VG    SQ YV  K KAC + G  S     P  +SEA+L++++ ELN  P +HGILVQLPLPKHI+  KVL  I+ EKDVDGFH  N G L M G  PLF PCTP GC+++L+     ++G RAVVVG SNIVG P+++LLL+  ATVTI +S T D  +  R+AD+V+AA G+  +I    +KPGA V
Sbjct:   15 IRSEAAQRAARLTER-GHQPGLAVVLVGEDPASQVYVRNKVKACEDNGFHSSLDRYPADLSEADLLARIDELNRDPRIHGILVQLPLPKHIDSHKVLEAIAPEKDVDGFHVANAGAL-MTGA-PLFRPCTPYGCMKMLESIQYPLRGARAVVVGASNIVGKPMAMLLLQGGATVTICNSKTRDIGAHTRDADVVVAAVGKRNLITADMVKPGAVV 226          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD2_SINMW (Bifunctional protein folD 2 OS=Sinorhizobium medicae (strain WSM419) GN=folD2 PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.571e-50
Identity = 106/213 (49.77%), Postives = 137/213 (64.32%), Query Frame = 1
Query:   10 EIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLK-RSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +I   V+ L E+ G+VPGLAVV+VG    S+ YV  K +     GI SF  +LP + ++ EL++ +  LN  P VHGILVQLPLP H++   V+ EI+  KDVDGFH  N G+LA     P F+PCTP GCL LLK R G  + G  AVV+G+SNIVG P+  LLL    TVTI HS T +   + READI+I A G+  +++G WIKPGA V
Sbjct:   24 DITARVKKLEEETGQVPGLAVVLVGEDPASRVYVGSKHRQTLAAGIASFKYELPAETTQEELMALIDRLNVDPAVHGILVQLPLPAHLDANAVIQEINPNKDVDGFHISNAGRLAT--GQPAFVPCTPLGCLLLLKDRLGANLSGLHAVVLGKSNIVGRPMVQLLLAESCTVTIAHSRTRNAPELCREADILIVAVGRPGLVRGDWIKPGAVV 234          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_VIBPA (Bifunctional protein folD OS=Vibrio parahaemolyticus GN=folD PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 4.664e-50
Identity = 110/215 (51.16%), Postives = 134/215 (62.33%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +RSE+A  V+       + PGLAVV+VG    SQ YV  KR+AC EVG  S   DLP   SE EL++ + ELN   ++ GILVQLPLP  I+   VL  I  EKDVDGFHP N+G+LA   R P    CTPKG + LL R  + ++GK AVVVG SNIVG P++L LL A  T T  H  T D ES VR+AD+V+ A G+   I G WIK GA V
Sbjct:   15 VRSEVAARVKARVAAGLRAPGLAVVLVGEDPASQVYVGSKRRACEEVGFVSKSFDLPASTSEEELLALIDELNNDNEIDGILVQLPLPAGIDTTHVLERIHPEKDVDGFHPYNVGRLAQ--RIPKLRSCTPKGIITLLDRYNIELRGKHAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKDLESHVRQADVVVVAVGKPNFIPGEWIKKGAVV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_STRPZ (Bifunctional protein folD OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=folD PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 4.664e-50
Identity = 106/215 (49.30%), Postives = 141/215 (65.58%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            ++ E+A +V  L +K G VPGLAV++VG    SQ YV  K +A   VG KS  + L E + + ELI+ +   NA   +HGILVQLPLP HIN++K++  I  +KDVDGFHP+N G L   GR PL +PCTP G +ELL+   V ++GK AV++GRSNIVG P++ LLL  +ATVT+ HS T   E + R AD++I A GQ   I   +IK GA V
Sbjct:   14 MQQELAAKVNNLKQKKGIVPGLAVILVGDDPASQVYVRNKERAALTVGFKSETVRLSEFICQEELIAVIERYNADNTIHGILVQLPLPNHINDKKIILAIDPKKDVDGFHPMNTGHL-WSGR-PLMVPCTPSGIMELLREYNVNLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRQLEEVCRCADVLIVAIGQGHFITKQYIKEGAIV 226          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_STRPM (Bifunctional protein folD OS=Streptococcus pyogenes serotype M28 GN=folD PE=3 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 4.664e-50
Identity = 106/215 (49.30%), Postives = 141/215 (65.58%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            ++ E+A +V  L +K G VPGLAV++VG    SQ YV  K +A   VG KS  + L E + + ELI+ +   NA   +HGILVQLPLP HIN++K++  I  +KDVDGFHP+N G L   GR PL +PCTP G +ELL+   V ++GK AV++GRSNIVG P++ LLL  +ATVT+ HS T   E + R AD++I A GQ   I   +IK GA V
Sbjct:   14 MQQELAAKVNNLKQKKGIVPGLAVILVGDDPASQVYVRNKERAALTVGFKSETVRLSEFICQEELIAVIERYNADNTIHGILVQLPLPNHINDKKIILAIDPKKDVDGFHPMNTGHL-WSGR-PLMVPCTPSGIMELLREYNVNLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRQLEEVCRCADVLIVAIGQGHFITKQYIKDGAIV 226          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_STRPG (Bifunctional protein folD OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=folD PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 4.664e-50
Identity = 106/215 (49.30%), Postives = 141/215 (65.58%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            ++ E+A +V  L +K G VPGLAV++VG    SQ YV  K +A   VG KS  + L E + + ELI+ +   NA   +HGILVQLPLP HIN++K++  I  +KDVDGFHP+N G L   GR PL +PCTP G +ELL+   V ++GK AV++GRSNIVG P++ LLL  +ATVT+ HS T   E + R AD++I A GQ   I   +IK GA V
Sbjct:   14 MQQELAAKVNNLKQKKGIVPGLAVILVGDDPASQVYVRNKERAALTVGFKSETVRLSEFICQEELIAVIERYNADNTIHGILVQLPLPNHINDKKIILAIDPKKDVDGFHPMNTGHL-WSGR-PLMVPCTPSGIMELLREYNVNLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRQLEEVCRCADVLIVAIGQGHFITKQYIKEGAIV 226          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_STRPF (Bifunctional protein folD OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=folD PE=3 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 4.664e-50
Identity = 106/215 (49.30%), Postives = 141/215 (65.58%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            ++ E+A +V  L +K G VPGLAV++VG    SQ YV  K +A   VG KS  + L E + + ELI+ +   NA   +HGILVQLPLP HIN++K++  I  +KDVDGFHP+N G L   GR PL +PCTP G +ELL+   V ++GK AV++GRSNIVG P++ LLL  +ATVT+ HS T   E + R AD++I A GQ   I   +IK GA V
Sbjct:   14 MQQELAAKVNNLKQKKGIVPGLAVILVGDDPASQVYVRNKERAALTVGFKSETVRLSEFICQEELIAVIERYNADNTIHGILVQLPLPNHINDKKIILAIDPKKDVDGFHPMNTGHL-WSGR-PLMVPCTPSGIMELLREYNVNLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRQLEEVCRCADVLIVAIGQGHFITKQYIKEGAIV 226          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_STRPD (Bifunctional protein folD OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=folD PE=3 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 4.664e-50
Identity = 106/215 (49.30%), Postives = 141/215 (65.58%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            ++ E+A +V  L +K G VPGLAV++VG    SQ YV  K +A   VG KS  + L E + + ELI+ +   NA   +HGILVQLPLP HIN++K++  I  +KDVDGFHP+N G L   GR PL +PCTP G +ELL+   V ++GK AV++GRSNIVG P++ LLL  +ATVT+ HS T   E + R AD++I A GQ   I   +IK GA V
Sbjct:   14 MQQELAAKVNNLKQKKGIVPGLAVILVGDDPASQVYVRNKERAALTVGFKSETVRLSEFICQEELIAVIERYNADNTIHGILVQLPLPNHINDKKIILAIDPKKDVDGFHPMNTGHL-WSGR-PLMVPCTPSGIMELLREYNVNLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRQLEEVCRCADVLIVAIGQGHFITKQYIKEGAIV 226          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_STRPC (Bifunctional protein folD OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=folD PE=3 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 4.664e-50
Identity = 106/215 (49.30%), Postives = 141/215 (65.58%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            ++ E+A +V  L +K G VPGLAV++VG    SQ YV  K +A   VG KS  + L E + + ELI+ +   NA   +HGILVQLPLP HIN++K++  I  +KDVDGFHP+N G L   GR PL +PCTP G +ELL+   V ++GK AV++GRSNIVG P++ LLL  +ATVT+ HS T   E + R AD++I A GQ   I   +IK GA V
Sbjct:   14 MQQELAAKVNNLKQKKGIVPGLAVILVGDDPASQVYVRNKERAALTVGFKSETVRLSEFICQEELIAVIERYNADNTIHGILVQLPLPNHINDKKIILAIDPKKDVDGFHPMNTGHL-WSGR-PLMVPCTPSGIMELLREYNVNLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRQLEEVCRCADVLIVAIGQGHFITKQYIKEGAIV 226          
The following BLAST results are available for this feature:
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_SHEWM3.571e-5049.77Bifunctional protein folD OS=Shewanella woodyi (st... [more]
FOLD_CUPTR3.571e-5052.09Bifunctional protein folD OS=Cupriavidus taiwanens... [more]
FOLD2_SINMW3.571e-5049.77Bifunctional protein folD 2 OS=Sinorhizobium medic... [more]
FOLD_VIBPA4.664e-5051.16Bifunctional protein folD OS=Vibrio parahaemolytic... [more]
FOLD_STRPZ4.664e-5049.30Bifunctional protein folD OS=Streptococcus pyogene... [more]
FOLD_STRPM4.664e-5049.30Bifunctional protein folD OS=Streptococcus pyogene... [more]
FOLD_STRPG4.664e-5049.30Bifunctional protein folD OS=Streptococcus pyogene... [more]
FOLD_STRPF4.664e-5049.30Bifunctional protein folD OS=Streptococcus pyogene... [more]
FOLD_STRPD4.664e-5049.30Bifunctional protein folD OS=Streptococcus pyogene... [more]
FOLD_STRPC4.664e-5049.30Bifunctional protein folD OS=Streptococcus pyogene... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00358 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00358 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623267 ID=BQ623267; Name=BQ623267; organism=Citrus sinensis; type=EST; length=646bp
ATCCGATCTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGG
CAAGGTGCCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCTC
AAAGCTATGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAG
TCTTTTGACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAG
CAAGGTTCACGAGCTTAACGCAATGCCTGATGTACATGGTATATTGGTTC
AACTTCCATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATA
AGCCTTGAGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCT
CGCAATGAAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGAT
GCCTTGAACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGCT
GTTGTGGTGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGCT
GCTGAAAGCTGATGCCACTGTAACCATAGTCCATTCACATACCCCTGATC
CTGAAAGTATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACAA
GCAATGATGATCAAGGGAAGTTGGATCAAGCCTGGTGCTGCTGTTA
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