BQ623267

Overview
NameBQ623267
Unique NameBQ623267
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_PROA2 (Bifunctional protein folD OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=folD PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 7.956e-50
Identity = 105/219 (47.95%), Postives = 138/219 (63.01%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL----KADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +++E+   V  L  K G VPGL V+IVG    SQ YV  K K+C E G+ S  I+LP + ++ EL+ K+  LN  PDVHGILVQ PLP HI E  V   I   KDVDGFHP N+G++ +   D  F+ CTP G LELL+R  +  +GK  VVVGRSNIVG P++ L+L    + + TVT+ HS T +   + R+ADI+IAA G+A  I    +KPGA V
Sbjct:   13 LKNELKTRVEELKAKAGCVPGLTVIIVGEDPASQVYVRNKAKSCKETGMNSTVIELPAETTQEELLGKIEALNQDPDVHGILVQQPLPSHIEEYAVTMAIDPAKDVDGFHPENVGQMVLGNLDKCFISCTPFGILELLRRYDIETRGKHCVVVGRSNIVGKPMANLMLQKLRETNCTVTVCHSATQNMPELTRQADILIAAIGRANFITREMVKPGAVV 231          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_ACIAC (Bifunctional protein folD OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=folD PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 7.956e-50
Identity = 106/215 (49.30%), Postives = 143/215 (66.51%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +R+++A    LL E+ G  PGLAVV+VG    SQ YV  K KAC E G+ S        +SEAEL+++V  LN  P +HGILVQLPLP HI+ +KV+  IS  KDVDGFH  + G L M G  P F PCTP GC+++L+  G  ++GK AVV+GRSNIVG P++L+LL  DATVT+ HS T D ++   +AD+++AA G+  ++    +KPGA V
Sbjct:   15 LRADVARRAALLKER-GTTPGLAVVLVGDNPASQVYVRNKVKACEESGLHSVLEKYDAAMSEAELLARVDALNNDPSIHGILVQLPLPAHIDAQKVIEAISPAKDVDGFHIASAGAL-MTGM-PGFWPCTPYGCMKMLEHIGYDLRGKHAVVIGRSNIVGKPMALMLLAKDATVTVCHSRTADLKAQTLQADVIVAAVGRRNVLTADMVKPGAVV 226          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: C1TC_RAT (C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus GN=Mthfd1 PE=1 SV=3)

HSP 1 Score: 196.823 bits (499), Expect = 7.956e-50
Identity = 108/218 (49.54%), Postives = 139/218 (63.76%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKY-GKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKH--INEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            IR+ +  +V  + E+  G  PGLA++ VG R DS  Y+++K KA  E+GIK+  I LP   +E+E++  V  LN    VHG +VQLPL     IN E V+  I+ EKDVDG   +N GKLA       F+PCTPKGCLEL+K +GV I G+ AVVVGRS IVG P+  LLL  +ATVT  HS T D +  V + DI++ A GQ  M+KG WIKPGA V
Sbjct:   16 IRNRLKTQVTQMQEQVPGFTPGLAILQVGDRDDSNLYINVKLKAAQEIGIKATHIKLPRTSTESEVLKYVISLNEDATVHGFIVQLPLDSENSINTEAVINAIAPEKDVDGLTSINAGKLARGDLKDCFIPCTPKGCLELIKETGVQIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTADLDKEVNKGDILVVATGQPEMVKGEWIKPGAVV 233          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_WOLPP (Bifunctional protein folD OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=folD PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.039e-49
Identity = 100/212 (47.17%), Postives = 140/212 (66.04%), Query Frame = 1
Query:   10 EIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            E+++++ +L ++Y   P L V++VG    SQ YV  K++    +GI S  I LP+ +SE ELI KV+ LN    VHGILVQLPLPKHI+  +++  +S+EKDVDGFH  N+G+L +KG     +PCTPKG L L+K     + GK AV++GRSNIVG P+  LLL+ + TVTI+HS + D      +ADIV+AA G+   ++  WIK GA V
Sbjct:   17 ELSKKIDILKKEYNVFPCLKVILVGSNPASQVYVRNKQRKAESIGISSETIVLPDSISEDELIEKVNTLNEDSSVHGILVQLPLPKHISASRIINTVSVEKDVDGFHDENVGRL-VKGEKNCLIPCTPKGSLHLIKSVENNLSGKNAVIIGRSNIVGKPMFHLLLQENCTVTILHSQSRDLADYCSKADIVVAAVGKPNFVQPDWIKKGAIV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_SHEB8 (Bifunctional protein folD OS=Shewanella baltica (strain OS185) GN=folD PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.039e-49
Identity = 108/215 (50.23%), Postives = 135/215 (62.79%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            IR++++E+V    E   ++PGLAVV+VG    SQ YV  KRKAC EVG  S   DL    SE EL+S +  LN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +GV   G  AVVVG SNIVG P++L LL A  T T  H  T + E  +R AD+V+ A G+   I G WIKPGA V
Sbjct:   15 IRTKLSEKVTARKEAGQRIPGLAVVLVGADPASQVYVGSKRKACEEVGFISRSYDLETSCSEDELLSLIDSLNDDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRIADLVVVAVGKPGFIPGEWIKPGAIV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_SHEB5 (Bifunctional protein folD OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=folD PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.039e-49
Identity = 108/215 (50.23%), Postives = 135/215 (62.79%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            IR++++E+V    E   ++PGLAVV+VG    SQ YV  KRKAC EVG  S   DL    SE EL+S +  LN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +GV   G  AVVVG SNIVG P++L LL A  T T  H  T + E  +R AD+V+ A G+   I G WIKPGA V
Sbjct:   15 IRTKLSEKVTARKEAGQRIPGLAVVLVGADPASQVYVGSKRKACEEVGFISRSYDLETSCSEDELLSLIDSLNDDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRIADLVVVAVGKPGFIPGEWIKPGAIV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_SHEB2 (Bifunctional protein folD OS=Shewanella baltica (strain OS223) GN=folD PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.039e-49
Identity = 108/215 (50.23%), Postives = 135/215 (62.79%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            IR++++E+V    E   ++PGLAVV+VG    SQ YV  KRKAC EVG  S   DL    SE EL+S +  LN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +GV   G  AVVVG SNIVG P++L LL A  T T  H  T + E  +R AD+V+ A G+   I G WIKPGA V
Sbjct:   15 IRTKLSEKVTARKEAGQRIPGLAVVLVGADPASQVYVGSKRKACEEVGFISRSYDLETSCSEDELLSLIDSLNDDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRIADLVVVAVGKPGFIPGEWIKPGAIV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_POLNA (Bifunctional protein folD OS=Polaromonas naphthalenivorans (strain CJ2) GN=folD PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.039e-49
Identity = 105/215 (48.84%), Postives = 149/215 (69.30%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +R+E+A+   LL  + G  PGLAVV+VG    SQ YV  K KAC + G+ S     P ++SEA+L+++V  LN  P +HGILVQLPLP HI+ +KV+  IS  KDVDGFH  + G L M G+ P F PCTP GC+++L+  G  ++GK AVV+GRSNIVG P++L+LL+ +ATVTI HS T D +++  +AD+++AA G+  +++   +KPGA V
Sbjct:   15 LRTEVAQRAALLRAR-GITPGLAVVLVGDNPASQVYVRNKVKACEDNGLHSVLERYPAEMSEADLLARVEALNNDPAIHGILVQLPLPAHIDAQKVIEAISPAKDVDGFHVGSAGAL-MVGQ-PGFWPCTPYGCMKMLESIGYDLRGKHAVVIGRSNIVGKPMALMLLQKNATVTICHSATADLKAMTLQADVIVAAVGKRNVLRADMVKPGAVV 226          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_OCEIH (Bifunctional protein folD OS=Oceanobacillus iheyensis GN=folD PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.039e-49
Identity = 105/215 (48.84%), Postives = 144/215 (66.98%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            ++ ++  EV  L EK G  P L V++VG    S+SYV  K KACA  GI S  I+LPE +S+ EL+  + E N    VHGILVQLPLP  ++E+K++  IS  KDVDGFHP+N+GK+ M G D  F+PCTP G L +L+   ++++GK AV++GRSNIVG P+ LLLL+ +ATVT  HS T + + I ++ADI+I A G+A  I   +IK  A V
Sbjct:   14 LKQKMKIEVDELKEK-GLTPHLTVILVGDNPASKSYVKGKEKACAVTGISSNLIELPENISQDELLQIIDEQNNDDSVHGILVQLPLPDQMDEQKIIHAISPAKDVDGFHPINVGKM-MTGED-TFIPCTPYGILTMLRSKDISLEGKHAVIIGRSNIVGKPIGLLLLQENATVTYTHSRTKNLQEITKQADILIVAIGRAHAINADYIKEDAVV 225          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_NITOC (Bifunctional protein folD OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=folD PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.039e-49
Identity = 108/215 (50.23%), Postives = 139/215 (64.65%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            IR  I + V+       + PGLAV+++G    SQ YV  KR+AC EVG KS   DLP   ++A L++ + +LNA   V GILVQLPL  HI+ E+V+ +I  +KDVDGFHP NIG+L +  R PL  PCTP G + LL+ +G  ++G  AVVVG SNIVG P+ L LL A  TVTI H  T D    + EADIV+AA G+  +I+G WIKPGA V
Sbjct:   15 IRRNIKKRVQERITAGLRPPGLAVILLGSDPASQVYVRNKRRACEEVGFKSLAYDLPADTTQANLLALIDQLNADSTVDGILVQLPLGGHIDAEQVIEQIRPDKDVDGFHPYNIGRLTL--RLPLLRPCTPHGVITLLRTTGQDLRGLEAVVVGASNIVGRPMMLELLLAGCTVTICHRWTRDLHKPISEADIVVAAVGKPHLIQGKWIKPGATV 227          
The following BLAST results are available for this feature:
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_PROA27.956e-5047.95Bifunctional protein folD OS=Prosthecochloris aest... [more]
FOLD_ACIAC7.956e-5049.30Bifunctional protein folD OS=Acidovorax avenae sub... [more]
C1TC_RAT7.956e-5049.54C-1-tetrahydrofolate synthase, cytoplasmic OS=Ratt... [more]
FOLD_WOLPP1.039e-4947.17Bifunctional protein folD OS=Wolbachia pipientis s... [more]
FOLD_SHEB81.039e-4950.23Bifunctional protein folD OS=Shewanella baltica (s... [more]
FOLD_SHEB51.039e-4950.23Bifunctional protein folD OS=Shewanella baltica (s... [more]
FOLD_SHEB21.039e-4950.23Bifunctional protein folD OS=Shewanella baltica (s... [more]
FOLD_POLNA1.039e-4948.84Bifunctional protein folD OS=Polaromonas naphthale... [more]
FOLD_OCEIH1.039e-4948.84Bifunctional protein folD OS=Oceanobacillus iheyen... [more]
FOLD_NITOC1.039e-4950.23Bifunctional protein folD OS=Nitrosococcus oceani ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00358 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00358 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623267 ID=BQ623267; Name=BQ623267; organism=Citrus sinensis; type=EST; length=646bp
ATCCGATCTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGG
CAAGGTGCCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCTC
AAAGCTATGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAG
TCTTTTGACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAG
CAAGGTTCACGAGCTTAACGCAATGCCTGATGTACATGGTATATTGGTTC
AACTTCCATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATA
AGCCTTGAGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCT
CGCAATGAAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGAT
GCCTTGAACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGCT
GTTGTGGTGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGCT
GCTGAAAGCTGATGCCACTGTAACCATAGTCCATTCACATACCCCTGATC
CTGAAAGTATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACAA
GCAATGATGATCAAGGGAAGTTGGATCAAGCCTGGTGCTGCTGTTA
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