BQ623267

Overview
NameBQ623267
Unique NameBQ623267
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_BURCH (Bifunctional protein folD OS=Burkholderia cenocepacia (strain HI2424) GN=folD PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.039e-49
Identity = 105/215 (48.84%), Postives = 143/215 (66.51%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +R++ AE    L+ + G  PGLAV++VG    S+ YV  K KAC + G  S     P  +SEA+L++++ ELN  P +HGILVQLPLP HI+  KV+  I+ EKDVDGFH  N G L M G+ PLF PCTP G +++ +  G+ ++G  AVV+GRSNIVG P++++LL A ATVTI HS T D  +  READIV+AA G+  ++    +KPGA V
Sbjct:   15 LRAQAAERAAALTAR-GHQPGLAVILVGANPASEVYVRNKIKACEDNGFFSLKDAYPATLSEADLLARIDELNRDPKIHGILVQLPLPAHIDSHKVIEAIAPEKDVDGFHVANAGAL-MTGK-PLFRPCTPYGVMKMFEAHGIALQGANAVVIGRSNIVGKPMAMMLLDAGATVTICHSKTRDLAAHTREADIVVAAVGKRNILTADMVKPGATV 226          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_BURCA (Bifunctional protein folD OS=Burkholderia cenocepacia (strain AU 1054) GN=folD PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.039e-49
Identity = 105/215 (48.84%), Postives = 143/215 (66.51%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +R++ AE    L+ + G  PGLAV++VG    S+ YV  K KAC + G  S     P  +SEA+L++++ ELN  P +HGILVQLPLP HI+  KV+  I+ EKDVDGFH  N G L M G+ PLF PCTP G +++ +  G+ ++G  AVV+GRSNIVG P++++LL A ATVTI HS T D  +  READIV+AA G+  ++    +KPGA V
Sbjct:   15 LRAQAAERAAALTAR-GHQPGLAVILVGANPASEVYVRNKIKACEDNGFFSLKDAYPATLSEADLLARIDELNRDPKIHGILVQLPLPAHIDSHKVIEAIAPEKDVDGFHVANAGAL-MTGK-PLFRPCTPYGVMKMFEAHGIALQGANAVVIGRSNIVGKPMAMMLLDAGATVTICHSKTRDLAAHTREADIVVAAVGKRNILTADMVKPGATV 226          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_BORA1 (Bifunctional protein folD OS=Bordetella avium (strain 197N) GN=folD PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.039e-49
Identity = 109/215 (50.70%), Postives = 142/215 (66.05%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            IR E+AE    L+ + G  PGLAVV+VG    SQ YV  K  AC + G+ S     P  +SEA+L++++  LN  P +HGILVQLPLP H++  KV+  I+ EKDVDGFH  N G L M G+ PLF PCTP G +++L+  GVT++G  AVVVG SNIVG P+++LLL A ATVTI +S T D  +  R AD+++ A G+  MI G  IKPGA V
Sbjct:   15 IREEVAERAAALTAQ-GVRPGLAVVLVGEDPASQVYVRNKVAACEKAGLHSVKEQYPADLSEADLLARIDALNRDPSIHGILVQLPLPAHLDSHKVIEAIAPEKDVDGFHISNAG-LLMTGQ-PLFRPCTPYGVMKMLESEGVTLRGAEAVVVGASNIVGKPMAMLLLAAGATVTICNSKTRDLAAQTRRADVLVVATGRPRMITGDMIKPGAVV 226          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_SHEPC (Bifunctional protein folD OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=folD PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.357e-49
Identity = 106/215 (49.30%), Postives = 136/215 (63.26%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            IR++++E+V    E   +VPGLAV++VG    SQ YV  KRKAC EVG  S   DL    +E EL++ +  LN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +GV   G  AVVVG SNIVG P++L LL A  T T  H  T + E  +R+AD+V+ A G+   I G WIKPGA V
Sbjct:   15 IRTKLSEKVTARKEAGQRVPGLAVILVGADPASQVYVGSKRKACEEVGFISRSYDLETNCTEDELLNLIDSLNDDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRQADLVVVAVGKPGFIPGEWIKPGAIV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_PELUB (Bifunctional protein folD OS=Pelagibacter ubique GN=folD PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.357e-49
Identity = 100/215 (46.51%), Postives = 140/215 (65.12%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +R ++ +EV  L  K+ K+PGL V+++G    SQ YV MK KA  EVG+KS  I  PE V E  ++ K+ ELN    + GILVQLPLPKHI+++KV+  I   KDVDGFHP+N+G L+        +PCTP GC  ++K+    + GK+AV++GRSN+ G P++ LLLK + TVTI HS T D ++   EADI++AA G   ++K  W+K  A V
Sbjct:   13 LREQLRQEVVELKAKHNKIPGLTVILIGEMAPSQIYVRMKEKAANEVGLKSEVIRYPEAVEEKTVLDKIEELNKDESISGILVQLPLPKHIDKQKVIETILPGKDVDGFHPMNVGNLSSGYESS--VPCTPLGCYLMIKKIEPNLSGKKAVMIGRSNLNGKPMAQLLLKENCTVTITHSKTKDLKAECLEADIIVAAVGIPELVKADWVKKDAIV 225          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_LAWIP (Bifunctional protein folD OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=folD PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.357e-49
Identity = 106/219 (48.40%), Postives = 134/219 (61.19%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK----ADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            I  E+  EV  L   Y  VPGL  ++VG    S SYV++K K   E+G      +  E ++E ELI  + + N  P +HGILVQLPLP HINE KVL  I   KDVDGFHP+N+G+L + G    FLPCTP G  ELL RS V   G   VV+GRSNIVG P+S++L +     DATVT+VH+ + +     ++ADIVIAA G    +K  WIKPGA V
Sbjct:   15 ILEELRGEVANLKRDYNVVPGLVTILVGNHPASLSYVTLKIKTAIELGFHEIQDNQSETITEEELIGIIKKYNEDPLIHGILVQLPLPSHINEGKVLHAIDPNKDVDGFHPMNLGRLVIGGNAITFLPCTPAGIQELLIRSSVETLGAEVVVIGRSNIVGRPISIMLTQKGVGGDATVTLVHTKSKNIVRHCQQADIVIAAVGVPNFVKAEWIKPGATV 233          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_BACA2 (Bifunctional protein folD OS=Bacillus amyloliquefaciens (strain FZB42) GN=folD PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.357e-49
Identity = 109/215 (50.70%), Postives = 146/215 (67.91%), Query Frame = 1
Query:    4 RSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDID-LPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            R ++A+EV  L  + G VPGLAV+++G    S SYV+ K+KA   +G+K F +D     ++EAEL++ + + N  P+ HGILVQLPLP HI+E+ V+  IS +KDVDGFHPLN+GK+ + G D  FLPCTP G +ELLK++ V + GK  VVVGRSNIVG PV  LLL  +ATVT  HS T +     ++ADI++ A G+A  IK   IK GA V
Sbjct:   16 REQLAKEVEELKAQ-GVVPGLAVILIGDDPASVSYVTGKKKAAETMGMK-FKLDRFDSSLTEAELLTVIDQYNQNPEFHGILVQLPLPDHISEKAVIERISPDKDVDGFHPLNVGKMLL-GED-TFLPCTPHGIVELLKKTNVDLSGKEVVVVGRSNIVGKPVGQLLLNENATVTYCHSRTKNMSEHTKKADILVVAVGKANFIKADQIKEGAIV 226          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_VIBVY (Bifunctional protein folD OS=Vibrio vulnificus (strain YJ016) GN=folD PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.772e-49
Identity = 106/215 (49.30%), Postives = 134/215 (62.33%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +RSE+A  V+       + PGLAVV+VG    SQ YV  KR+AC EVG  S   DLP   SE EL++ + ELN   ++ GILVQLPLP  I+   VL  I  EKDVDGFHP N+G+LA   R P    CTPKG + LL+R  + ++GK AV+VG SNIVG P++L LL A  T T  H  T D E  VR+AD+++ A G+   I G W+K GA V
Sbjct:   15 VRSEVAARVKARVAAGLRAPGLAVVLVGEDPASQVYVGSKRRACEEVGFVSKSFDLPASTSEEELLALIDELNNDAEIDGILVQLPLPAGIDSTHVLESIHPEKDVDGFHPYNVGRLAQ--RIPKLRSCTPKGIITLLERYNIALRGKHAVIVGASNIVGRPMTLELLLAGCTTTTCHRFTKDLEGHVRQADVLVVAVGKPNFIPGEWVKEGAIV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_VIBVU (Bifunctional protein folD OS=Vibrio vulnificus GN=folD PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.772e-49
Identity = 106/215 (49.30%), Postives = 134/215 (62.33%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +RSE+A  V+       + PGLAVV+VG    SQ YV  KR+AC EVG  S   DLP   SE EL++ + ELN   ++ GILVQLPLP  I+   VL  I  EKDVDGFHP N+G+LA   R P    CTPKG + LL+R  + ++GK AV+VG SNIVG P++L LL A  T T  H  T D E  VR+AD+++ A G+   I G W+K GA V
Sbjct:   15 VRSEVAARVKARVAAGLRAPGLAVVLVGEDPASQVYVGSKRRACEEVGFVSKSFDLPASTSEEELLALIDELNNDAEIDGILVQLPLPAGIDSTHVLESIHPEKDVDGFHPYNVGRLAQ--RIPKLRSCTPKGIITLLERYNIALRGKHAVIVGASNIVGRPMTLELLLAGCTTTTCHRFTKDLEGHVRQADVLVVAVGKPNFIPGEWVKEGAIV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_SHESR (Bifunctional protein folD OS=Shewanella sp. (strain MR-7) GN=folD PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.772e-49
Identity = 106/215 (49.30%), Postives = 135/215 (62.79%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            IR+++ E+V    E   +VPGLAV++VG    SQ YV  KRKAC EVG  S   DL    +E  L++ + ELN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +GV   G  AVVVG SNIVG P++L LL A  T T  H  T + E  +R+AD+V+ A G+   I G WIKPGA V
Sbjct:   15 IRTQLREKVTARKEAGQRVPGLAVILVGADPASQVYVGSKRKACEEVGFISRSYDLDTSYTEEALLALIDELNDDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRQADLVVVAVGKPGFIPGEWIKPGAIV 227          
The following BLAST results are available for this feature:
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_BURCH1.039e-4948.84Bifunctional protein folD OS=Burkholderia cenocepa... [more]
FOLD_BURCA1.039e-4948.84Bifunctional protein folD OS=Burkholderia cenocepa... [more]
FOLD_BORA11.039e-4950.70Bifunctional protein folD OS=Bordetella avium (str... [more]
FOLD_SHEPC1.357e-4949.30Bifunctional protein folD OS=Shewanella putrefacie... [more]
FOLD_PELUB1.357e-4946.51Bifunctional protein folD OS=Pelagibacter ubique G... [more]
FOLD_LAWIP1.357e-4948.40Bifunctional protein folD OS=Lawsonia intracellula... [more]
FOLD_BACA21.357e-4950.70Bifunctional protein folD OS=Bacillus amyloliquefa... [more]
FOLD_VIBVY1.772e-4949.30Bifunctional protein folD OS=Vibrio vulnificus (st... [more]
FOLD_VIBVU1.772e-4949.30Bifunctional protein folD OS=Vibrio vulnificus GN=... [more]
FOLD_SHESR1.772e-4949.30Bifunctional protein folD OS=Shewanella sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00358 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00358 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623267 ID=BQ623267; Name=BQ623267; organism=Citrus sinensis; type=EST; length=646bp
ATCCGATCTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGG
CAAGGTGCCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCTC
AAAGCTATGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAG
TCTTTTGACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAG
CAAGGTTCACGAGCTTAACGCAATGCCTGATGTACATGGTATATTGGTTC
AACTTCCATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATA
AGCCTTGAGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCT
CGCAATGAAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGAT
GCCTTGAACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGCT
GTTGTGGTGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGCT
GCTGAAAGCTGATGCCACTGTAACCATAGTCCATTCACATACCCCTGATC
CTGAAAGTATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACAA
GCAATGATGATCAAGGGAAGTTGGATCAAGCCTGGTGCTGCTGTTA
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