BQ623267

Overview
NameBQ623267
Unique NameBQ623267
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1505 contig Csv1_Contig1505:94..739. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_CLOCE (Bifunctional protein folD OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=folD PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.121e-54
Identity = 109/196 (55.61%), Postives = 140/196 (71.43%), Query Frame = 1
Query:   58 PGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            PGLAV+IVG    S+ YV+ K+  C E+GIKSF+  LPE  SE EL+  +  LN    V+GILVQLP+PKHINEEKV+  IS +KD D FHP+N+GKL M G+ P FLPCTP G +ELL+ +G+ I GK  VVVGRSNIVG P ++LLL  +ATVTI HS T + E + R AD+++ A G++  IK  ++KPGA V
Sbjct:   33 PGLAVIIVGDDPASRVYVNHKKNDCTEIGIKSFEYALPESTSEEELLDLIETLNNDASVNGILVQLPIPKHINEEKVIAAISPDKDADCFHPMNVGKL-MIGK-PEFLPCTPAGVVELLEENGIEISGKNCVVVGRSNIVGKPQAILLLAKNATVTICHSKTANIEEVCRSADVLVVAIGKSEFIKPEFVKPGAVV 226          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: C1TC_DROME (C-1-tetrahydrofolate synthase, cytoplasmic OS=Drosophila melanogaster GN=pug PE=1 SV=4)

HSP 1 Score: 209.92 bits (533), Expect = 9.082e-54
Identity = 113/218 (51.83%), Postives = 148/218 (67.89%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGK-VPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLP--KHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            IR E+  EV  +S++    VPGL +V VGGR+DS  Y+ MK KA  E+GI +  + LP  ++E EL+ K+++LN  P VHGI+VQ+PL     I+  ++   +S EKDVDG H +N G+LA+ G    FLPCTP GCLEL++RSGV I G RAVV+GRS IVG P + LL  A+ATVT+ HS T + E I R ADI++   G A M+KGSWIKPGA V
Sbjct:   50 IREELRNEVTAMSKQLADFVPGLRIVQVGGREDSNVYIRMKIKAATEIGIDAAHVQLPRSITEVELLDKINDLNEDPRVHGIIVQMPLDCDTPIDSHRITDAVSPEKDVDGLHTVNEGRLAI-GDLGGFLPCTPWGCLELIRRSGVEIAGARAVVLGRSKIVGTPAAELLKWANATVTVCHSKTRNLEEITRSADILVVGIGVAEMVKGSWIKPGAVV 266          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_LACS1 (Bifunctional protein folD OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=folD PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.023e-53
Identity = 113/215 (52.56%), Postives = 144/215 (66.98%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            IR+ ++E+V LL ++ G  P L V++VG    SQ YV  KRK    +GI++ DI LPE V E ELI  + ELN+   VHGILVQLPLPKHINE KV   I  EKDVDGFHPLNIGKL M    P  LPCTP+G +E  K   + + GKR V+VGRSNIVG P++ LL+ +DATVTI HS T +   + ++ADI+I A G+   I  +++K GA V
Sbjct:   15 IRTNVSEKVSLLKQE-GITPKLVVILVGEDPASQVYVRNKRKTAHALGIEAVDIRLPENVEEDELIRLIDELNSDGTVHGILVQLPLPKHINENKVTHRIIPEKDVDGFHPLNIGKLFMNIPGP--LPCTPRGIMEFFKEYDIPVSGKRVVIVGRSNIVGRPMAALLVNSDATVTIAHSKTKNLAEVTKQADILIVAIGKGEFIDENYVKKGAVV 226          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: C1TC_YEAST (C-1-tetrahydrofolate synthase, cytoplasmic OS=Saccharomyces cerevisiae GN=ADE3 PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.023e-53
Identity = 107/211 (50.71%), Postives = 140/211 (66.35%), Query Frame = 1
Query:    4 RSEIAEEVRLLSEKY-GKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKP 633
            RS IA E++ +     G  P LA++ VG R DS +YV MKRKA  E GI +  I L E  +E E++  V +LN  P  HGI+VQLPLP H++E+++   +  EKDVDGF P NIG+L  K   P FLPCTPKG +ELL ++ VTI+G R+VV+GRS+IVG PV+ LL   ++TVTI HS T D  S + +ADIV+ A GQ   +KG W KP
Sbjct:   16 RSNIANEIKSIQGHVPGFAPNLAIIQVGNRPDSATYVRMKRKAAEEAGIVANFIHLDESATEFEVLRYVDQLNEDPHTHGIIVQLPLPAHLDEDRITSRVLAEKDVDGFGPTNIGELNKKNGHPFFLPCTPKGIIELLHKANVTIEGSRSVVIGRSDIVGSPVAELLKSLNSTVTITHSKTRDIASYLHDADIVVVAIGQPEFVKGEWFKP 226          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_AZOC5 (Bifunctional protein folD OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=folD PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 4.507e-53
Identity = 114/215 (53.02%), Postives = 144/215 (66.98%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +R+ IAEEV +L   +   PGLAVV+VG    SQ YV  K    AE G+ SF+  LP   +EA+L++ V +LNA P V+GILVQLPLP H++  KVL  I   KDVDGFH +N G+LA+ G D L +PCTP GC+ LLK     + G  AVVVGRSNIVG P + LLL+ D TVTI HS T D   + R+ADI++AA G+  M++G WIKPGA V
Sbjct:   16 LRARIAEEVAVLVRDHDLKPGLAVVLVGEDPASQVYVRNKAAQTAEAGMASFEYKLPADTAEADLLALVEKLNADPAVNGILVQLPLPAHLDSMKVLAAIDPAKDVDGFHVVNAGRLAV-GLDAL-VPCTPLGCVMLLKHHLGNLSGLNAVVVGRSNIVGKPAAQLLLREDCTVTIAHSRTRDLPGMCRQADILVAAVGRPEMVRGDWIKPGATV 228          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD2_GEOSL (Bifunctional protein folD 2 OS=Geobacter sulfurreducens GN=folD2 PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 4.507e-53
Identity = 113/215 (52.56%), Postives = 147/215 (68.37%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            IR+++A +V+ L  + G  PGLA V+VG    S+ YV MK  AC ++G+ S  I  P + +E EL++ ++ELN  P +HGILVQLPLP  IN ++VL  IS  KDVDGFHP N+G+L + G+ P F PCTP G + +L+ +GV + GK  VVVGRSNIVG PV+L+ L+ +ATVTI HS T D    VR AD+VIAA G   MIKG WIK GA V
Sbjct:   14 IRADLAAQVKELQSR-GITPGLATVLVGSDPASEVYVRMKGDACNKLGMHSVKITRPAETTEEELLALINELNNDPAIHGILVQLPLPPQINADRVLEAISPAKDVDGFHPYNVGRL-VTGK-PTFQPCTPYGVMVMLQEAGVDLAGKEVVVVGRSNIVGKPVALMCLQRNATVTICHSKTRDLPGRVRAADVVIAAVGVPEMIKGDWIKEGAVV 225          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_ANADF (Bifunctional protein folD OS=Anaeromyxobacter sp. (strain Fw109-5) GN=folD PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 5.887e-53
Identity = 116/215 (53.95%), Postives = 142/215 (66.05%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +R E+AE VR L    G  PGL+VV VG    S  YV  KRK C EVGI+S +  LP  VS+A+L++ V  LNA P VHGILVQLPLPKH++E  VL  I   KD DGFHP N+G L++ G      PCTP G + LL  + V  KGKRA+VVGRSNIVG P++ +LL+  ATVTI HS T D    V  ADIV+AA G+A +I+G WI+ GA V
Sbjct:   12 VRGEVAEAVRALKAS-GVAPGLSVVRVGDDPASAIYVRGKRKDCEEVGIRSDEHHLPATVSQADLLALVARLNADPTVHGILVQLPLPKHLDERAVLDAIDPRKDSDGFHPFNVGALSI-GIPGTPRPCTPAGVMRLLDEARVDPKGKRAIVVGRSNIVGKPMAAMLLERHATVTIAHSRTQDLAGEVARADIVVAAIGKAELIRGEWIREGAVV 224          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_RHORT (Bifunctional protein folD OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=folD PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 7.689e-53
Identity = 111/217 (51.15%), Postives = 143/217 (65.90%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAM--KGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +R  IA+EV  L    G VPGLAVV+VG    SQ YV  K K    VG+ S    L    SEAE+++KV  LNA P + GILVQLPLP HI+E+K+L  I  +KDVDGFHP+N+G+L++     +   +PCTPKGCL LLK     + GK A+V+GRSNIVG P++ LLL A+ TVT+ HS + D   + R  DIV+AA G+  M+KG W+KPGA V
Sbjct:   15 LRERIAQEVADLKAHRGLVPGLAVVLVGEDAASQVYVGSKEKMAVAVGMHSVVCRLAATTSEAEVLAKVEALNADPTIDGILVQLPLPAHIDEDKILLAIDPDKDVDGFHPVNVGRLSIGQSNGEHGMVPCTPKGCLMLLKGVLGDLTGKTALVIGRSNIVGKPMAQLLLSANCTVTLAHSRSRDLPDLCRRMDIVVAAVGRPEMVKGDWLKPGAVV 231          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_BREBN (Bifunctional protein folD OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=folD PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.004e-52
Identity = 115/215 (53.49%), Postives = 148/215 (68.84%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            IR+E+A EV  L +K G VPGL VVIVG    S SYV  K K C EVGI S  I     ++E EL+  + +LN  P+V+GILVQLPLP HI+E  V+  I+ EKDVDGFHP++IG + + G D + LPCTP G +EL+KR+G  + GK AVV+GRSNIVG PVSLLL + +ATVT+ HS T + E   ++ADI++ A G+A MI    +KPGA V
Sbjct:   15 IRAELANEVVEL-KKQGVVPGLTVVIVGDDPASHSYVRGKAKGCEEVGISSEIIRKDADITEEELLVIIQQLNENPNVNGILVQLPLPAHISEHAVIEAIAPEKDVDGFHPISIGNMVL-GNDTM-LPCTPHGIIELIKRTGTQMAGKHAVVIGRSNIVGKPVSLLLQQENATVTMCHSRTQNLEEYTQKADILVVATGRAHMIGKEHVKPGAVV 226          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_DESOH (Bifunctional protein folD OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=folD PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.713e-52
Identity = 105/219 (47.95%), Postives = 145/219 (66.21%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK----ADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            I  EI  EV+ + EK+GKVPGL  ++VG    S SYV++K +    VG K      P  +SEA+L++ + + N    +HGILVQLPLPKHI+E+KVL  I  +KDVDGFHP+N+G+L + G +  F PCTP G  E++ R+GV   G   VVVGRSNIVG P++ ++L+    A+ATVT+VH+ T + +   + ADI+I AAG   ++K  WIKPGA V
Sbjct:   15 ILKEIEAEVKEIKEKHGKVPGLVTILVGESPASISYVTLKIQTAHRVGFKEVQDSQPVDISEADLLALIDKYNKDDSIHGILVQLPLPKHIDEKKVLNAIDPDKDVDGFHPVNVGRLMIGGSEVKFPPCTPAGIQEMIVRAGVETSGAEVVVVGRSNIVGKPIANMMLQKGPGANATVTVVHTRTKNMDEHCKRADILIVAAGVPGLVKPEWIKPGACV 233          
The following BLAST results are available for this feature:
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_CLOCE3.121e-5455.61Bifunctional protein folD OS=Clostridium celluloly... [more]
C1TC_DROME9.082e-5451.83C-1-tetrahydrofolate synthase, cytoplasmic OS=Dros... [more]
FOLD_LACS12.023e-5352.56Bifunctional protein folD OS=Lactobacillus salivar... [more]
C1TC_YEAST2.023e-5350.71C-1-tetrahydrofolate synthase, cytoplasmic OS=Sacc... [more]
FOLD_AZOC54.507e-5353.02Bifunctional protein folD OS=Azorhizobium caulinod... [more]
FOLD2_GEOSL4.507e-5352.56Bifunctional protein folD 2 OS=Geobacter sulfurred... [more]
FOLD_ANADF5.887e-5353.95Bifunctional protein folD OS=Anaeromyxobacter sp. ... [more]
FOLD_RHORT7.689e-5351.15Bifunctional protein folD OS=Rhodospirillum rubrum... [more]
FOLD_BREBN1.004e-5253.49Bifunctional protein folD OS=Brevibacillus brevis ... [more]
FOLD_DESOH1.713e-5247.95Bifunctional protein folD OS=Desulfococcus oleovor... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00358 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00358 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623267 ID=BQ623267; Name=BQ623267; organism=Citrus sinensis; type=EST; length=646bp
ATCCGATCTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGG
CAAGGTGCCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCTC
AAAGCTATGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAG
TCTTTTGACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAG
CAAGGTTCACGAGCTTAACGCAATGCCTGATGTACATGGTATATTGGTTC
AACTTCCATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATA
AGCCTTGAGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCT
CGCAATGAAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGAT
GCCTTGAACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGCT
GTTGTGGTGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGCT
GCTGAAAGCTGATGCCACTGTAACCATAGTCCATTCACATACCCCTGATC
CTGAAAGTATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACAA
GCAATGATGATCAAGGGAAGTTGGATCAAGCCTGGTGCTGCTGTTA
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