BQ623267

Overview
NameBQ623267
Unique NameBQ623267
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1505 contig Csv1_Contig1505:94..739. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_PHEZH (Bifunctional protein folD OS=Phenylobacterium zucineum (strain HLK1) GN=folD PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 2.922e-52
Identity = 112/215 (52.09%), Postives = 143/215 (66.51%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +R ++A+EV  L   Y   PGLAVV+VG    SQ YV  K +    VG+ S    LP    + EL+  V ELNA P +HGILVQLPLPKH++E+ V+  IS +KDVDG H +N G+LA     P  +PCTP GCL +L+ +   + GKRAVVVGRS +VG PV+ LLL+AD TVTI HS T D  ++ READI++AA G+  MI+G WIKPGA V
Sbjct:   15 LRGQVADEVARLRADYRLQPGLAVVLVGEDPASQVYVRSKGEHSLAVGMHSVTHRLPADTRQDELLRLVAELNADPLIHGILVQLPLPKHLDEKAVIAAISPDKDVDGLHVVNAGRLA--SGLPALVPCTPLGCLIMLRETLGDLTGKRAVVVGRSLLVGKPVAQLLLQADCTVTIAHSRTVDLPAVCREADILVAAVGRPRMIRGDWIKPGATV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_OCHA4 (Bifunctional protein folD OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=folD PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 2.922e-52
Identity = 109/214 (50.93%), Postives = 138/214 (64.49%), Query Frame = 1
Query:    7 SEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKR-SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            S +  E   L    G VPG+AVVIVG    SQ YV+ K K   E G  S   DLPE  SE EL+  +  LN  P +HGILVQLPLPKHI+  +V+  IS +KDVDGFH +N+GKL     +  F+PCTP G + +++R  G  + G  AVV+GRSNIVG P+  LLL A+ATVT+ HS T D  +I R ADI++AA G+  M+KG W+KPGA V
Sbjct:   16 STVKTETEKLVAATGIVPGIAVVIVGEDPASQVYVASKSKKAKECGFHSVQHDLPETASEQELLDLIESLNNDPAIHGILVQLPLPKHIDSGRVIQTISPDKDVDGFHFINVGKLGTGEVETAFVPCTPAGAMIMIERIHGRDLSGLNAVVIGRSNIVGKPMFNLLLAANATVTVAHSRTKDLPAIARTADILVAAVGRPQMVKGDWVKPGATV 229          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD3_SPHWW (Bifunctional protein folD 3 OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=folD3 PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 2.922e-52
Identity = 110/215 (51.16%), Postives = 141/215 (65.58%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +R+ +A  V       G+ PGLAVV+VG    SQ YV  K KA  E G++SF+  LP   SE EL++ V  LNA   V GILVQLPLP HI+E+KV+  I  +KDVDGFH +N G+LA+   +  ++PCTP GCL LLK     + G  AVV+GRSNIVG P++ LLL  + TVTI HS T D   +VR ADIV+AA G+  M++G WI+PGA V
Sbjct:   21 LRARVATAVPAFRVAAGRAPGLAVVLVGEDAASQVYVRSKHKATVEAGMESFEHRLPATASETELLALVERLNADDRVDGILVQLPLPPHIDEKKVIATIDPDKDVDGFHVVNAGRLAV--GEAGYVPCTPLGCLMLLKDRRGDLSGLEAVVIGRSNIVGKPMAALLLAENCTVTIAHSRTRDLAEVVRRADIVVAAVGRPEMVRGDWIRPGATV 233          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_MARAV (Bifunctional protein folD OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=folD PE=3 SV=2)

HSP 1 Score: 204.142 bits (518), Expect = 4.984e-52
Identity = 109/215 (50.70%), Postives = 137/215 (63.72%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +R ++A  V    +K  + PGLAVV+VG    SQ YV  KRKAC + GI S   DLPE  S+A L + V ELN  P V GILVQLPLP H++ + +L +I  +KDVDGFHP NIG+L    R P   PCTP G + LL   G   KG+ AV+VG SNIVG P+S+ LL   AT T+ H  T + E  V EADI++AA G+  +IKG W+KPGA V
Sbjct:   15 VRQQVAAGVEARKQKGLRAPGLAVVLVGHDPASQVYVGNKRKACEQAGILSLSYDLPEDTSQAALEALVDELNENPAVDGILVQLPLPSHLDADPILVKIRPDKDVDGFHPYNIGRLMQ--RKPTLRPCTPAGVITLLDSIGTPYKGQHAVIVGASNIVGRPMSMELLLKGATTTVCHRFTDNLEKFVGEADILVAAVGKPGIIKGEWVKPGATV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_RHOS1 (Bifunctional protein folD OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=folD PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 6.509e-52
Identity = 110/215 (51.16%), Postives = 141/215 (65.58%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +R+ +AEEV  L E +G VPGLAVV+VG    SQ YV  K K   EVG+ SF+  LP + SEAEL++ +  LN  P VHGILVQLPLP H+N + V+  +   KDVDGFH  N+G+L    +    +PCTP GCL +L+    T+ G  AVVVGRSNIVG P++ LLL    TVTI HS T D  ++ R ADI++AA G+  MI G ++KPGA V
Sbjct:   15 VRARVAEEVARLKEGHGIVPGLAVVLVGEDPASQVYVGAKGKQTVEVGMASFEHRLPAETSEAELLALIDRLNHDPAVHGILVQLPLPAHLNADLVINALDPAKDVDGFHISNVGRLGTGQKS--MVPCTPLGCLMMLRDHLGTLSGLNAVVVGRSNIVGKPMAQLLLGESCTVTIAHSRTRDLAAVCRGADILVAAVGRPEMITGDFVKPGATV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD2_ROSDO (Bifunctional protein folD 2 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=folD2 PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 6.509e-52
Identity = 105/215 (48.84%), Postives = 140/215 (65.12%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +R+++AE V  + + +G  PGLAVV+VG    SQ YV  K K   E G+ S++  L    SEA+L++ V +LN  P+VHGILVQLPLPKH++E+ ++  I   KDVDGFH  N+G L    +    +PCTP GCL +L+    ++ G  AVV+GRSNIVG P++ LLL    TVTI HS T D   +VR ADIV+AA G+  M+ G WIKPGA V
Sbjct:   15 VRAQVAEHVTRIKQDHGITPGLAVVLVGEDPASQVYVRSKGKQTVEAGMNSYEHKLDADTSEADLLAVVDKLNKDPNVHGILVQLPLPKHLDEDLIINSIDPAKDVDGFHISNVGLLGTGQKS--MVPCTPLGCLMMLREHHGSLSGMNAVVIGRSNIVGKPMAQLLLNDSCTVTIAHSRTKDLPDVVRGADIVVAAVGRPEMVPGDWIKPGATV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD1_ROSDO (Bifunctional protein folD 1 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=folD1 PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 6.509e-52
Identity = 109/215 (50.70%), Postives = 140/215 (65.12%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +R+++AE V  L   +G  PGLAVV+VG    SQ YV  K K   EVG+KS +  L    SE +L++ V +LN  PD+HGILVQLPLP H++E+ V+  I+ EKDVDGFH  N+G L    +    +PCTP GCL +L+    ++ G  AVVVGRSNIVG P++ LLL    TVTI HS T D   +VR ADIV+AA G+  M+ G WIKPGA V
Sbjct:   15 VRAQVAEHVTRLKADHGITPGLAVVLVGQDPASQVYVRSKGKQTTEVGMKSVEHKLDADTSETDLLAVVDQLNKDPDIHGILVQLPLPGHLDEDLVINSIAPEKDVDGFHISNVGLLGTGQKS--MVPCTPLGCLMMLRDYHGSLLGMDAVVVGRSNIVGKPMAQLLLGDSCTVTIAHSRTKDLADVVRRADIVVAAVGRPEMVPGDWIKPGATV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_MANSM (Bifunctional protein folD OS=Mannheimia succiniciproducens (strain MBEL55E) GN=folD PE=3 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 8.501e-52
Identity = 102/215 (47.44%), Postives = 143/215 (66.51%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +++E+ +++     +  + PGLAV++VG    SQ YV  KRK+CAE+GI S   DL E  SEA L++ + ELN   D+ GILVQLPLPKHI+  KV+  I+  KDVDGFHP N+G+L    R P    CTP G ++LL+ + + +KG+ AV+VG SNIVG P+++ LL A  TVT+ H  T + E  VR+ADI++ A G+A  I G+W+K GA V
Sbjct:   15 VKTEVGQKIEQYVAQGKRAPGLAVILVGADPASQVYVGSKRKSCAEIGINSKSYDLEESTSEAALLTLIDELNNDADIDGILVQLPLPKHIDSTKVIERIAPHKDVDGFHPYNVGRLCQ--RIPTLRACTPYGIMKLLETTELNLKGRHAVIVGASNIVGRPMAMELLLAGCTVTVTHRFTTNLEGYVRQADILVVAVGKAEFIPGNWVKEGAVV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_SOLUE (Bifunctional protein folD OS=Solibacter usitatus (strain Ellin6076) GN=folD PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.110e-51
Identity = 110/215 (51.16%), Postives = 146/215 (67.91%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            I+ E+   +  L+  +G+ PGLAVV+VG    S+ YV  K K C ++GI S  I  P+ +S  EL++ V  LNA  ++ GILVQLPLP  ++ +++L  +S  KDVDGFHP N+G  A+    P    CTP G +ELLKR G+ I G+RAVVVGRS+IVG PV++LLL   ATVTI HS TPD +S+ READI++AA G+A MI G +IKPGA V
Sbjct:   14 IKGELKPRIAALAA-HGRPPGLAVVLVGNNPASEIYVRNKIKTCHDLGIYSESITPPDTISTEELLAIVQGLNARAEIDGILVQLPLPPQVDTKRILMAVSPAKDVDGFHPCNVG--ALVANLPAPRACTPAGIMELLKRGGIPIAGQRAVVVGRSDIVGKPVAMLLLHEHATVTICHSKTPDLKSLCREADILVAAIGRAAMITGEFIKPGATV 225          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_NOVAD (Bifunctional protein folD OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=folD PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.110e-51
Identity = 106/215 (49.30%), Postives = 142/215 (66.05%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +R  + +       + G+  GLAVV+VG    SQ YV  K K+  E G+ SF+  LP   +EA+L++ V +LNA P V GILVQLPLP+H++E+KV+  I+ +KDVDGFH +N G+LA+    P F+PCTP GCL LLK     + G  AVV+GRSNIVG P++ LL+    TVT+ HS T +   +VR ADIV+AA G+  M+KG WIKPGA V
Sbjct:   15 LRGRVGDLATAFEARAGRKAGLAVVLVGEDPASQVYVRSKGKSTLEAGMASFEHKLPADTAEADLLAVVEQLNADPAVDGILVQLPLPRHMDEQKVIAAINPDKDVDGFHVINAGRLAV--GQPGFVPCTPLGCLMLLKDRLGDLSGLDAVVIGRSNIVGKPMAQLLIAESCTVTVAHSRTKNLPEVVRRADIVVAAVGRPEMVKGDWIKPGATV 227          
The following BLAST results are available for this feature:
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_PHEZH2.922e-5252.09Bifunctional protein folD OS=Phenylobacterium zuci... [more]
FOLD_OCHA42.922e-5250.93Bifunctional protein folD OS=Ochrobactrum anthropi... [more]
FOLD3_SPHWW2.922e-5251.16Bifunctional protein folD 3 OS=Sphingomonas wittic... [more]
FOLD_MARAV4.984e-5250.70Bifunctional protein folD OS=Marinobacter aquaeole... [more]
FOLD_RHOS16.509e-5251.16Bifunctional protein folD OS=Rhodobacter sphaeroid... [more]
FOLD2_ROSDO6.509e-5248.84Bifunctional protein folD 2 OS=Roseobacter denitri... [more]
FOLD1_ROSDO6.509e-5250.70Bifunctional protein folD 1 OS=Roseobacter denitri... [more]
FOLD_MANSM8.501e-5247.44Bifunctional protein folD OS=Mannheimia succinicip... [more]
FOLD_SOLUE1.110e-5151.16Bifunctional protein folD OS=Solibacter usitatus (... [more]
FOLD_NOVAD1.110e-5149.30Bifunctional protein folD OS=Novosphingobium aroma... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00358 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00358 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623267 ID=BQ623267; Name=BQ623267; organism=Citrus sinensis; type=EST; length=646bp
ATCCGATCTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGG
CAAGGTGCCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCTC
AAAGCTATGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAG
TCTTTTGACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAG
CAAGGTTCACGAGCTTAACGCAATGCCTGATGTACATGGTATATTGGTTC
AACTTCCATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATA
AGCCTTGAGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCT
CGCAATGAAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGAT
GCCTTGAACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGCT
GTTGTGGTGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGCT
GCTGAAAGCTGATGCCACTGTAACCATAGTCCATTCACATACCCCTGATC
CTGAAAGTATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACAA
GCAATGATGATCAAGGGAAGTTGGATCAAGCCTGGTGCTGCTGTTA
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