BQ623267

Overview
NameBQ623267
Unique NameBQ623267
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_ACIF2 (Bifunctional protein folD OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=folD PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.894e-51
Identity = 105/215 (48.84%), Postives = 144/215 (66.98%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            I ++I+        ++G+ PGLAVV+VG    S+ YV  KR+ CA VGI SF  +LP   +  +L++ + ELN    V GILVQLPLP H + E+++  I++EKDVDGFHP NIG+LA+  R PL   CTP G + LL+ SG+ IKGK AV+VG SNIVG P++L LL A ATVT+ H  T D  + V  A++++AAAG+  +I G+WI+ GA V
Sbjct:   15 IHADISLRSHAFLRQWGRSPGLAVVLVGADPASRIYVQKKRETCASVGIASFSANLPADTNPQQLLAHIGELNVNDAVDGILVQLPLPPHFDPEEIIEAIAVEKDVDGFHPYNIGRLAL--RAPLLRSCTPAGIMTLLQESGIDIKGKEAVIVGASNIVGRPMALELLLAGATVTVCHRFTRDLAAHVGRAELLVAAAGKPGLISGAWIREGAVV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_ZYMMO (Bifunctional protein folD OS=Zymomonas mobilis GN=folD PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.473e-51
Identity = 105/215 (48.84%), Postives = 141/215 (65.58%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +R++IAE+V+   ++   VPGLAVV+VG    S+ YV  K +    VG+ S    L    S+ EL+  +  LN  P VHGILVQLPLPKHI+   +L  I  +KDVDGFH +N G+LA+    P  +PCTP GC+ LL+ S  ++KGK A+V+GRS IVG P++ LLL AD TVT+ H HT + E + R+ADIV+AA G    +K SW+KPGA V
Sbjct:   16 LRNKIAEDVKAFKKERNVVPGLAVVLVGEDPASRIYVRKKEEMTTAVGMNSLSYRLDANASQQELLDLIETLNHDPAVHGILVQLPLPKHIDTPTILEAIDPDKDVDGFHVVNAGRLAIG--TPSLVPCTPAGCMMLLEHSLGSLKGKNALVIGRSTIVGRPMAQLLLAADCTVTVAHRHTKNLEELCRQADIVVAAVGIPHFVKASWLKPGAVV 228          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_RHOSK (Bifunctional protein folD OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=folD PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.473e-51
Identity = 109/215 (50.70%), Postives = 140/215 (65.12%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +R+ +AEEV  L E +G VPGLAVV+VG    SQ YV  K K   EVG+ SF+  LP   SEAEL++ +  LN  P VHGILVQLPLP H+N + V+  +   KDVDGFH  N+G+L    +    +PCTP GCL +L+    T+ G  AVVVGRSNIVG P++ LLL    TVT+ HS T D  ++ R ADI++AA G+  MI G ++KPGA V
Sbjct:   15 VRARVAEEVARLKEGHGIVPGLAVVLVGEDPASQVYVGAKGKQTVEVGMTSFEHRLPAGTSEAELLALIDRLNHDPAVHGILVQLPLPAHLNADLVINALDPAKDVDGFHISNVGRLGTGQKS--MVPCTPLGCLMMLRDHLGTLSGLNAVVVGRSNIVGKPMAQLLLGESCTVTVAHSRTRDLAAVCRGADILVAAVGRPEMITGDFVKPGATV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_ACTP2 (Bifunctional protein folD OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=folD PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.473e-51
Identity = 107/215 (49.77%), Postives = 142/215 (66.05%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +++ IAE+++  + +  + PGLAV++VG    SQ YV+ KRK+CAE+GI+S   DLP +  EAEL++ + +LN    V GILVQLPLPK I+  KV   I   KDVDGFHP N+G+L  K   P    CTP G ++LL+ +GV + G  AVVVG SNIVG P+++ LL A  TVTI HS T D    V +ADIV+A  G+   +KG WIKPGA V
Sbjct:   15 VKANIAEQIQAYTAQDKRKPGLAVILVGMDPASQVYVNSKRKSCAEIGIESKSYDLPAETGEAELLAIIEQLNHDDSVDGILVQLPLPKQIDATKVTEAIVPHKDVDGFHPYNVGRLCQK--IPTLRSCTPYGVMKLLESTGVNLAGLHAVVVGASNIVGRPMAMELLLAGCTVTITHSRTKDLAYHVSQADIVVAGVGKPNFVKGEWIKPGAIV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_ACIBL (Bifunctional protein folD OS=Acidobacteria bacterium (strain Ellin345) GN=folD PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.473e-51
Identity = 110/215 (51.16%), Postives = 145/215 (67.44%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            I++E+A EV  L  K G  PGLAVV+VG    S+ YV  K KAC   GI S     P+ VS A+L+  V  LN   D+ GILVQLPLPK ++ +K+L  +S EKDVDGFHP+N+G L+     P  +PCTP GC+E+L+RS V ++G  AVVVGRS+IVG P+++LL  A+ATVTI HS T D  ++ R ADI++AA G+  MI   ++KPGA V
Sbjct:   15 IKTEVAAEVAELKAK-GLTPGLAVVLVGHNPASEIYVRNKVKACEMTGIYSEQHTPPDTVSTADLLQLVESLNRRNDIDGILVQLPLPKQVDSKKILLAVSPEKDVDGFHPMNVGYLSTVR--PGLVPCTPAGCMEILRRSNVPVEGADAVVVGRSDIVGKPIAMLLTNANATVTICHSKTHDLPAVCRRADILVAAIGRPGMITPDFVKPGATV 226          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_HAEIN (Bifunctional protein folD OS=Haemophilus influenzae GN=folD PE=3 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 3.230e-51
Identity = 104/215 (48.37%), Postives = 144/215 (66.98%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            I++ +A+++    E+  + PGLAV++VG    SQ YV  KRK+C EVGI S   DLPE  ++ EL++ + +LNA  ++ GILVQLPLPK IN E ++  I  +KDVDGFHP N+G+L    R P    CTP G ++LL+ +G+ + GK AV+VG SNIVG P+SL LL A ATVT+ H  T + E+ VR+ADI++ A G+  +I G WIK  A V
Sbjct:   15 IKANLADKITHYIEQGKRAPGLAVILVGADPASQIYVGNKRKSCEEVGILSKSYDLPETTTQNELLAIIDQLNADKNIDGILVQLPLPKQINAEAIIERIDPKKDVDGFHPYNVGRLCQ--RIPTLRACTPYGVMKLLETTGIDLHGKHAVIVGASNIVGRPMSLELLLAGATVTVTHRFTKNLENHVRQADILVVAVGKPNLISGDWIKESAVV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_HAEIE (Bifunctional protein folD OS=Haemophilus influenzae (strain PittEE) GN=folD PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.230e-51
Identity = 104/215 (48.37%), Postives = 144/215 (66.98%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            I++ +A+++    E+  + PGLAV++VG    SQ YV  KRK+C EVGI S   DLPE  ++ EL++ + +LNA  ++ GILVQLPLPK IN E ++  I  +KDVDGFHP N+G+L    R P    CTP G ++LL+ +G+ + GK AV+VG SNIVG P+SL LL A ATVT+ H  T + E+ VR+ADI++ A G+  +I G WIK  A V
Sbjct:   15 IKANLADKITHYIEQGKRAPGLAVILVGADPASQIYVGNKRKSCEEVGILSKSYDLPETTTQNELLAIIDQLNADKNIDGILVQLPLPKQINAEAIIERIDPKKDVDGFHPYNVGRLCQ--RIPTLRACTPYGVMKLLETTGIDLHGKHAVIVGASNIVGRPMSLELLLAGATVTVTHRFTKNLENHVRQADILVVAVGKPNLISGDWIKESAVV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_HAEI8 (Bifunctional protein folD OS=Haemophilus influenzae (strain 86-028NP) GN=folD PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.230e-51
Identity = 104/215 (48.37%), Postives = 144/215 (66.98%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            I++ +A+++    E+  + PGLAV++VG    SQ YV  KRK+C EVGI S   DLPE  ++ EL++ + +LNA  ++ GILVQLPLPK IN E ++  I  +KDVDGFHP N+G+L    R P    CTP G ++LL+ +G+ + GK AV+VG SNIVG P+SL LL A ATVT+ H  T + E+ VR+ADI++ A G+  +I G WIK  A V
Sbjct:   15 IKANLADKITHYIEQGKRAPGLAVILVGADPASQIYVGNKRKSCEEVGILSKSYDLPETTTQNELLAIIDQLNADKNIDGILVQLPLPKQINAEAIIERIDPKKDVDGFHPYNVGRLCQ--RIPTLRACTPYGVMKLLETTGIDLHGKHAVIVGASNIVGRPMSLELLLAGATVTVTHRFTKNLENHVRQADILVVAVGKPNLISGDWIKESAVV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_BRUSU (Bifunctional protein folD OS=Brucella suis GN=folD PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.230e-51
Identity = 107/214 (50.00%), Postives = 138/214 (64.49%), Query Frame = 1
Query:    7 SEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKR-SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            S +  E   L    G VPG+AVVIVG    SQ YV+ K +   E G  S   DLPE  SE EL++ +  LN  P +HGILVQLPLP HI+  +V+  I+ EKDVDGFH +N+GKL     +  F+PCTP G + +++R  G  + G  AVV+GRSNIVG P+  LLL A+ATVT+ HS T D  +I R ADI++AA G+  M+KG W+KPGA V
Sbjct:   16 STVKTETEKLVAATGVVPGIAVVIVGEDPASQVYVASKSRKAKECGFHSVQHDLPETASEQELLNLIEGLNNDPAIHGILVQLPLPGHIDSGRVIQTIAPEKDVDGFHFINVGKLGTGEVETAFVPCTPAGAMIMIERVHGRDLSGLNAVVIGRSNIVGKPMFNLLLAANATVTVAHSRTKDLPAIARNADILVAAVGRPQMVKGDWVKPGATV 229          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_BRUSI (Bifunctional protein folD OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=folD PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.230e-51
Identity = 107/214 (50.00%), Postives = 138/214 (64.49%), Query Frame = 1
Query:    7 SEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKR-SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            S +  E   L    G VPG+AVVIVG    SQ YV+ K +   E G  S   DLPE  SE EL++ +  LN  P +HGILVQLPLP HI+  +V+  I+ EKDVDGFH +N+GKL     +  F+PCTP G + +++R  G  + G  AVV+GRSNIVG P+  LLL A+ATVT+ HS T D  +I R ADI++AA G+  M+KG W+KPGA V
Sbjct:   16 STVKTETEKLVAATGVVPGIAVVIVGEDPASQVYVASKSRKAKECGFHSVQHDLPETASEQELLNLIEGLNNDPAIHGILVQLPLPGHIDSGRVIQTIAPEKDVDGFHFINVGKLGTGEVETAFVPCTPAGAMIMIERVHGRDLSGLNAVVIGRSNIVGKPMFNLLLAANATVTVAHSRTKDLPAIARNADILVAAVGRPQMVKGDWVKPGATV 229          
The following BLAST results are available for this feature:
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_ACIF21.894e-5148.84Bifunctional protein folD OS=Acidithiobacillus fer... [more]
FOLD_ZYMMO2.473e-5148.84Bifunctional protein folD OS=Zymomonas mobilis GN=... [more]
FOLD_RHOSK2.473e-5150.70Bifunctional protein folD OS=Rhodobacter sphaeroid... [more]
FOLD_ACTP22.473e-5149.77Bifunctional protein folD OS=Actinobacillus pleuro... [more]
FOLD_ACIBL2.473e-5151.16Bifunctional protein folD OS=Acidobacteria bacteri... [more]
FOLD_HAEIN3.230e-5148.37Bifunctional protein folD OS=Haemophilus influenza... [more]
FOLD_HAEIE3.230e-5148.37Bifunctional protein folD OS=Haemophilus influenza... [more]
FOLD_HAEI83.230e-5148.37Bifunctional protein folD OS=Haemophilus influenza... [more]
FOLD_BRUSU3.230e-5150.00Bifunctional protein folD OS=Brucella suis GN=folD... [more]
FOLD_BRUSI3.230e-5150.00Bifunctional protein folD OS=Brucella suis (strain... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00358 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00358 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623267 ID=BQ623267; Name=BQ623267; organism=Citrus sinensis; type=EST; length=646bp
ATCCGATCTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGG
CAAGGTGCCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCTC
AAAGCTATGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAG
TCTTTTGACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAG
CAAGGTTCACGAGCTTAACGCAATGCCTGATGTACATGGTATATTGGTTC
AACTTCCATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATA
AGCCTTGAGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCT
CGCAATGAAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGAT
GCCTTGAACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGCT
GTTGTGGTGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGCT
GCTGAAAGCTGATGCCACTGTAACCATAGTCCATTCACATACCCCTGATC
CTGAAAGTATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACAA
GCAATGATGATCAAGGGAAGTTGGATCAAGCCTGGTGCTGCTGTTA
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