BQ623267

Overview
NameBQ623267
Unique NameBQ623267
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1505 contig Csv1_Contig1505:94..739. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_ACTPJ (Bifunctional protein folD OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=folD PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.230e-51
Identity = 106/215 (49.30%), Postives = 142/215 (66.05%), Query Frame = 1 
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +++ IAE+++  + +  + PGLAV++VG    SQ YV+ KRK+CAE+GI+S   DLP +  EAEL++ + +LN    V GILVQLPLPK I+  KV   I   KDVDGFHP N+G+L  K   P    CTP G ++LL+ +GV + G  AVVVG SNIVG P+++ LL A  TVT+ HS T D    V +ADIV+A  G+   +KG WIKPGA V
Sbjct:   15 VKANIAEQIQAYTAQDKRKPGLAVILVGMDPASQVYVNSKRKSCAEIGIESKSYDLPAETGEAELLAIIEQLNHDDSVDGILVQLPLPKQIDATKVTEAIVPHKDVDGFHPYNVGRLCQK--IPTLRSCTPYGVMKLLESTGVNLAGLHAVVVGASNIVGRPMAMELLLAGCTVTVTHSRTKDLAYHVSQADIVVAGVGKPNFVKGEWIKPGAIV 227
[Close]
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_ACTP7 (Bifunctional protein folD OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=folD PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.230e-51
Identity = 106/215 (49.30%), Postives = 142/215 (66.05%), Query Frame = 1 
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +++ IAE+++  + +  + PGLAV++VG    SQ YV+ KRK+CAE+GI+S   DLP +  EAEL++ + +LN    V GILVQLPLPK I+  KV   I   KDVDGFHP N+G+L  K   P    CTP G ++LL+ +GV + G  AVVVG SNIVG P+++ LL A  TVT+ HS T D    V +ADIV+A  G+   +KG WIKPGA V
Sbjct:   15 VKANIAEQIQAYTAQDKRKPGLAVILVGMDPASQVYVNSKRKSCAEIGIESKSYDLPAETGEAELLAIIEQLNHDDSVDGILVQLPLPKQIDATKVTEAIVPHKDVDGFHPYNVGRLCQK--IPTLRSCTPYGVMKLLESTGVNLAGLHAVVVGASNIVGRPMAMELLLAGCTVTVTHSRTKDLAYHVSQADIVVAGVGKPNFVKGEWIKPGAIV 227
[Close]
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD2_MYXXD (Bifunctional protein folD 2 OS=Myxococcus xanthus (strain DK 1622) GN=folD2 PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.230e-51
Identity = 109/215 (50.70%), Postives = 147/215 (68.37%), Query Frame = 1 
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +R+E+  EV  L  ++G  PGLAVV VG    S+ YV+ K+KA  EVG +S+++   E +++A L+  +H+LNA P VHGILVQLPLP+HI+ + ++  +  EKDVDGFHPLN G L + GR      CTP G + LL+  G    GKRAVVVGRSNIVG P++L+LL+ +ATVTI HS + D    V  ADI++ A G A ++KG+WIKPGA V
Sbjct:   15 VRAEVKAEVDRLKLEHGLTPGLAVVRVGEDPASKVYVNGKKKAAEEVGFRSWELHPDEGITQAALLEVIHQLNADPAVHGILVQLPLPRHIDPDVIISAVKPEKDVDGFHPLNAGNLLL-GRSTT-RACTPYGVMRLLEEIGCDPAGKRAVVVGRSNIVGKPMALMLLQKNATVTICHSKS-DLRREVEGADILVVAVGAAELVKGAWIKPGAVV 226
[Close]
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD1_SILPO (Bifunctional protein folD 1/3 OS=Silicibacter pomeroyi GN=folD1 PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.230e-51
Identity = 108/215 (50.23%), Postives = 137/215 (63.72%), Query Frame = 1 
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            IR ++AE V  L   +G  PGLAVV+VG    SQ YV  K K   EVG+ S++  L    SEA+L++ +  LN  PDVHGILVQLPLP H++E+ V+  I   KDVDGFH  N+G L    +    +PCTP GCL +L+    ++ G  AVV+GRSNIVG P++ LLL    TVTI HS T D   +VR ADIV+AA G+  M+ G WIKPGA V
Sbjct:   15 IRGQVAEHVAELKAGHGITPGLAVVLVGEDPASQVYVRSKGKQTVEVGMNSYEHKLDADTSEADLLALIDRLNGDPDVHGILVQLPLPGHLDEDLVINAIDPAKDVDGFHISNVGLLGTGQKS--MVPCTPLGCLMMLRDHHGSLSGMDAVVIGRSNIVGKPMAQLLLGDSCTVTIAHSRTKDLADVVRRADIVVAAVGRPEMVPGDWIKPGATV 227
[Close]
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_SILST (Bifunctional protein folD OS=Silicibacter sp. (strain TM1040) GN=folD PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.219e-51
Identity = 106/215 (49.30%), Postives = 140/215 (65.12%), Query Frame = 1 
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +R ++ E V  L E++G  PGLAVV+VG    SQ YV  K K   EVG+ S++  L    SEA+L++ + +LN   +VHGILVQLPLPKH++E+ V+  I+ EKDVDGFH  N+G L    +    +PCTP GCL +L+    ++ G  AVV+GRSNIVG P++ LLL    TVTI HS T D   +VR ADIV+AA G+  M+ G WIK GA V
Sbjct:   15 VRGQVTEHVTRLKEEHGITPGLAVVLVGEDPASQVYVRSKGKQTVEVGMNSYEHKLDADTSEADLLALIDQLNKDSEVHGILVQLPLPKHLDEDLVINSIAPEKDVDGFHISNVGLLGTGQKS--MVPCTPLGCLMMLRDYHGSLSGLDAVVIGRSNIVGKPMAQLLLGDSCTVTIAHSRTKDLPEVVRRADIVVAAVGRPEMVPGDWIKEGATV 227
[Close]
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_SHELP (Bifunctional protein folD OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=folD PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.219e-51
Identity = 108/215 (50.23%), Postives = 136/215 (63.26%), Query Frame = 1 
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            IR +++ +V    E   +VPGLAV++VG    SQ YV  KR+AC EVG  S   DLP + SEA+L++ + + N  P + GILVQLPLP HI E KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +GV   G  AVVVG SNIVG P++L LL A  T T  H  T D E  VR AD++I A G+   I G WIKPGA V
Sbjct:   15 IRKQLSAKVTARKEAGKRVPGLAVILVGADPASQVYVGSKRRACEEVGFLSQSFDLPTETSEADLLALIDKCNEDPSIDGILVQLPLPDHIEESKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTRDLEDKVRRADLLIVAVGKPNFIPGEWIKPGAIV 227
[Close]
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_AQUAE (Bifunctional protein folD OS=Aquifex aeolicus GN=folD PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.219e-51
Identity = 109/215 (50.70%), Postives = 143/215 (66.51%), Query Frame = 1 
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            IR EI +EV   + K  + P LAV++VG    S+ YV+ KRKAC +VGIKS    LP+ VSE +L+  ++ELN   +V GILVQLPLPKHI++ +V+  IS EKDVDGFHP N+GKL  +  D  F+PCTP G   LLK  G+ +KGK   +VG   IVG P+SLL+L  +ATV++ H HT D +   +EADI+I+A G   +IK   IK GA V
Sbjct:   14 IREEIKKEVENFTSKGFRPPALAVILVGNDPASEIYVNNKRKACEKVGIKSLFYHLPQDVSEEKLLGLIYELNMNEEVDGILVQLPLPKHIDQTRVILSISPEKDVDGFHPENMGKLVAQIEDG-FIPCTPLGIDILLKHYGIDVKGKDVTIVGAGFIVGRPLSLLMLWRNATVSVCHIHTKDVKKFTKEADILISATGVPHLIKEDMIKEGAVV 227
[Close]
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_SODGM (Bifunctional protein folD OS=Sodalis glossinidius (strain morsitans) GN=folD PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 5.510e-51
Identity = 108/215 (50.23%), Postives = 139/215 (64.65%), Query Frame = 1 
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +RSE+A  ++   +   + PGLAVV+VGG   SQ YV+ KRKAC +VG  S   DLP  V+EA L++ + +LNA   V+GILVQLPLP  I+   VL  I+ +KDVDGFHP N+G+L    R PL  PCTP+G + LL+R  +   G  AVVVG SNIVG P+SL LL A  TVT+ H  T D    +  AD+++ A G+A  I G WIKPGA V
Sbjct:   15 VRSEVAARIQARLKAGKRAPGLAVVLVGGDPASQIYVASKRKACEDVGFISLSYDLPNTVTEAALLALIDQLNADHRVNGILVQLPLPAGIDNISVLERIAPDKDVDGFHPYNVGRLCQ--RAPLLRPCTPRGIVTLLERYHIDTFGLNAVVVGASNIVGRPMSLELLLAGCTVTVTHRFTRDLRRHIENADLLVVAVGKASFIPGEWIKPGAVV 227
[Close]
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_SHEON (Bifunctional protein folD OS=Shewanella oneidensis GN=folD PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 5.510e-51
Identity = 108/215 (50.23%), Postives = 137/215 (63.72%), Query Frame = 1 
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            IR+++ E+V    E   +VPGLAV++VG    SQ YV  KRKAC EVG  S   DL    SEAEL++ + +LN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +GV   G  AVVVG SNIVG P++L LL A  T T  H  T + E  +R+AD+V+ A G+   I G WIKPGA V
Sbjct:   15 IRTQLREQVTARKEAGQRVPGLAVILVGADPASQVYVGSKRKACEEVGFISRSYDLDTSCSEAELLALIDQLNDDPSIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRQADLVVVAVGKPGFIPGEWIKPGAIV 227
[Close]
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_TOLAT (Bifunctional protein folD OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=folD PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 7.196e-51
Identity = 107/215 (49.77%), Postives = 136/215 (63.26%), Query Frame = 1 
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +R  +A  V     K  + PGLAVV+VG    SQ YV  KR+AC EVG  S   DL   +++ EL++ + +LNA P + G+LVQLPLP H++  +V+  I   KDVDGFHP N+G+LA   R P   PCTPKG + LL+ +GV IKG  AVVVG SNIVG P++L LL A  T T  H  T   E  VR+ADI++ A G+A  I G WIKPGA V
Sbjct:   15 VRQRVAARVAERKAKGLRAPGLAVVLVGEDAASQVYVGSKRRACEEVGFISKSYDLAPTITQDELLALIDQLNADPTIDGVLVQLPLPAHLDSTQVIERILPNKDVDGFHPYNVGRLAQ--RIPALRPCTPKGMMTLLENTGVKIKGMHAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKGLEQFVRQADILVVAVGKAEFIPGEWIKPGAIV 227
The following BLAST results are available for this feature:
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_ACTPJ3.230e-5149.30Bifunctional protein folD OS=Actinobacillus pleuro... [more]
FOLD_ACTP73.230e-5149.30Bifunctional protein folD OS=Actinobacillus pleuro... [more]
FOLD2_MYXXD3.230e-5150.70Bifunctional protein folD 2 OS=Myxococcus xanthus ... [more]
FOLD1_SILPO3.230e-5150.23Bifunctional protein folD 1/3 OS=Silicibacter pome... [more]
FOLD_SILST4.219e-5149.30Bifunctional protein folD OS=Silicibacter sp. (str... [more]
FOLD_SHELP4.219e-5150.23Bifunctional protein folD OS=Shewanella loihica (s... [more]
FOLD_AQUAE4.219e-5150.70Bifunctional protein folD OS=Aquifex aeolicus GN=f... [more]
FOLD_SODGM5.510e-5150.23Bifunctional protein folD OS=Sodalis glossinidius ... [more]
FOLD_SHEON5.510e-5150.23Bifunctional protein folD OS=Shewanella oneidensis... [more]
FOLD_TOLAT7.196e-5149.77Bifunctional protein folD OS=Tolumonas auensis (st... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00358 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00358 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623267 ID=BQ623267; Name=BQ623267; organism=Citrus sinensis; type=EST; length=646bp
ATCCGATCTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGG
CAAGGTGCCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCTC
AAAGCTATGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAG
TCTTTTGACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAG
CAAGGTTCACGAGCTTAACGCAATGCCTGATGTACATGGTATATTGGTTC
AACTTCCATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATA
AGCCTTGAGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCT
CGCAATGAAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGAT
GCCTTGAACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGCT
GTTGTGGTGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGCT
GCTGAAAGCTGATGCCACTGTAACCATAGTCCATTCACATACCCCTGATC
CTGAAAGTATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACAA
GCAATGATGATCAAGGGAAGTTGGATCAAGCCTGGTGCTGCTGTTA
back to top