BQ623267

Overview
NameBQ623267
Unique NameBQ623267
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1505 contig Csv1_Contig1505:94..739. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_RHOS4 (Bifunctional protein folD OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=folD PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 7.196e-51
Identity = 109/215 (50.70%), Postives = 139/215 (64.65%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +R+ +AEEV  L E +G VPGLAVV+VG    SQ YV  K K   EVG+ SF+  LP   SEAEL++ +  LN  P VHGILVQLPLP H+N + V+  +   KDVDGFH  N+G+L    +    +PCTP GCL +L+     + G  AVVVGRSNIVG P++ LLL    TVTI HS T D  ++ R ADI++AA G+  MI G ++KPGA V
Sbjct:   15 VRARVAEEVARLKEGHGIVPGLAVVLVGEDPASQVYVGAKGKQTVEVGMASFEHRLPAGTSEAELLALIDRLNHDPAVHGILVQLPLPAHLNADLVINALDPAKDVDGFHISNVGRLGTGQKS--MVPCTPLGCLMMLRDHLGALSGLNAVVVGRSNIVGKPMAQLLLGESCTVTIAHSRTRDLAAVCRGADILVAAVGRPEMITGDFVKPGATV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_RHISN (Bifunctional protein folD OS=Rhizobium sp. (strain NGR234) GN=folD PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 7.196e-51
Identity = 104/200 (52.00%), Postives = 134/200 (67.00%), Query Frame = 1
Query:   49 GKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKR-SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            G  PGLAV+IVG    SQ YV+ K +   E G  S   +LP  V E  L+  +  LNA P +HGILVQLPLP+H++  KV+  IS +KD+DGFH +N+GKL     +  F+PCTP GC+ L++R  G  + G  AVVVGRSNIVG P++ LLL A+ATVTI HS T + E + R+ADI+IAA G+  MI+  WIKPGA V
Sbjct:   32 GITPGLAVIIVGSDPASQVYVASKGRKAEECGFLSIKHELPHDVPERRLLELIDSLNADPSIHGILVQLPLPRHVDSGKVIQAISPQKDIDGFHFINVGKLGTGALETAFVPCTPAGCMILVERIHGKDLSGLSAVVVGRSNIVGKPMANLLLAANATVTIAHSRTANLEVLCRQADILIAAVGRPEMIRSDWIKPGATV 231          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_NEIMA (Bifunctional protein folD OS=Neisseria meningitidis serogroup A GN=folD PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 7.196e-51
Identity = 110/211 (52.13%), Postives = 138/211 (65.40%), Query Frame = 1
Query:   13 IAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +AE V    +    +P LAVV+VGG   S  YV  K+ AC + GIKS   +LPE  S+ EL++ V  LNA  +V GILVQLPLPKH++ + VL  IS +KDVDGFHP N+G+LA+K   PL  PCTPKG + LL+  G+  KGK+AVVVG SNIVG P +L LL A ATVT+ HS T +    V  ADI++   G    +KG WIKPGA V
Sbjct:   19 VAEAVAQRQQDNLHMPCLAVVLVGGDPASAVYVRNKKTACQKCGIKSLSYELPESTSQEELLALVDRLNADSEVDGILVQLPLPKHLDSQAVLERISPDKDVDGFHPYNVGRLAVK--MPLMRPCTPKGVMTLLEAYGIDPKGKKAVVVGASNIVGRPQALELLLARATVTVCHSATENLTDEVAGADILVVGVGIPNFVKGEWIKPGAVV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_NEIM0 (Bifunctional protein folD OS=Neisseria meningitidis serogroup C (strain 053442) GN=folD PE=3 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 7.196e-51
Identity = 110/211 (52.13%), Postives = 138/211 (65.40%), Query Frame = 1
Query:   13 IAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +AE V    +    +P LAVV+VGG   S  YV  K+ AC + GIKS   +LPE  S+ EL++ V  LNA  +V GILVQLPLPKH++ + VL  IS +KDVDGFHP N+G+LA+K   PL  PCTPKG + LL+  G+  KGK+AVVVG SNIVG P +L LL A ATVT+ HS T +    V  ADI++   G    +KG WIKPGA V
Sbjct:   19 VAEAVAQRQQDNLHMPCLAVVLVGGDPASAVYVRNKKTACQKCGIKSLSYELPESTSQEELLALVDRLNADSEVDGILVQLPLPKHLDSQAVLERISPDKDVDGFHPYNVGRLAVK--MPLMRPCTPKGVMTLLEAYGIDPKGKKAVVVGASNIVGRPQALELLLARATVTVCHSATENLADEVAGADILVVGVGIPNFVKGEWIKPGAVV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_MAGSA (Bifunctional protein folD OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=folD PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 7.196e-51
Identity = 109/215 (50.70%), Postives = 136/215 (63.26%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +R  I   V  +   +   PGLAVV+VG    SQ YV  K K   E G++SF+  LP    E  L+  +  LN  P+VHGILVQLP+PKHI+ +KV+  I   KDVDGFHP+N+G+LA  G     +PCTP G L LLK +   + G  AVV+GRSNIVG P++ LL+K   TVT+ HS T D   +VR ADIVIAA G+  MIKG WIKPGA V
Sbjct:   16 LRETITARVAEMKAAHHITPGLAVVLVGEDPASQVYVRTKGKRTVETGMRSFEHKLPADTPEDALLLLIESLNKDPEVHGILVQLPVPKHIDTQKVIEAIDPAKDVDGFHPVNVGRLAAGG--DALVPCTPLGSLLLLKDTLGKLGGLDAVVIGRSNIVGKPMAQLLIKESCTVTVAHSQTKDLPGVVRRADIVIAAVGRPEMIKGDWIKPGATV 228          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_BACCQ (Bifunctional protein folD OS=Bacillus cereus (strain Q1) GN=folD PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 7.196e-51
Identity = 106/214 (49.53%), Postives = 146/214 (68.22%), Query Frame = 1
Query:    4 RSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            R+++ EEV  L E+ G VPGLAV++VG    S+SYV  K K C +VGI S  I+ PE ++E  L++++  LN    ++GILVQLPLPKHI E+ ++  IS EKDVDGFHP+++G++ M G+D  FLPCTP G +EL+K + + I GK  VV+GRSNIVG PV  L L  +ATVT  HS T + + + + ADI+I A G+  M+   +IK GA V
Sbjct:   16 RAQLTEEVVKLKEQ-GIVPGLAVILVGEDPASRSYVKGKEKGCEQVGIYSELIEFPETITEERLLAEIDRLNGDDRINGILVQLPLPKHIEEKAIIERISPEKDVDGFHPISVGRM-MTGQD-TFLPCTPHGIVELVKETNLDISGKHVVVIGRSNIVGKPVGQLFLNENATVTYCHSKTQNMKELTKLADILIVAVGRPKMVTADYIKEGAVV 226          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_BACC7 (Bifunctional protein folD OS=Bacillus cereus (strain AH187) GN=folD PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 7.196e-51
Identity = 106/214 (49.53%), Postives = 146/214 (68.22%), Query Frame = 1
Query:    4 RSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            R+++ EEV  L E+ G VPGLAV++VG    S+SYV  K K C +VGI S  I+ PE ++E  L++++  LN    ++GILVQLPLPKHI E+ ++  IS EKDVDGFHP+++G++ M G+D  FLPCTP G +EL+K + + I GK  VV+GRSNIVG PV  L L  +ATVT  HS T + + + + ADI+I A G+  M+   +IK GA V
Sbjct:   16 RAQLTEEVVKLKEQ-GIVPGLAVILVGEDPASRSYVKGKEKGCEQVGIYSELIEFPETITEERLLAEIDRLNGDDRINGILVQLPLPKHIEEKAIIERISPEKDVDGFHPISVGRM-MTGQD-TFLPCTPHGIVELVKETNLDISGKHVVVIGRSNIVGKPVGQLFLNENATVTYCHSKTQNMKELTKLADILIVAVGRPKMVTADYIKEGAVV 226          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_VIBFM (Bifunctional protein folD OS=Vibrio fischeri (strain MJ11) GN=folD PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 9.399e-51
Identity = 107/215 (49.77%), Postives = 136/215 (63.26%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +RSE+   V+   E   + PGLAVV+VG    SQ YV  KR+AC EVG  S   DLP   SE+EL++ + ELN  P++ GILVQLPLP  ++  K+L  I  EKDVDGFHP N+G+L+   R P    CTPKG + LL R  + ++G  AVVVG SNIVG P++L LL A  T T  H  T D ES +R+AD+V+ A G+   I G WIK GA V
Sbjct:   15 VRSEVGARVKARVEAGLRAPGLAVVLVGQDPASQVYVGSKRRACEEVGFVSKSYDLPTTTSESELLNLIDELNQDPEIDGILVQLPLPAGMDSTKILEHIDPEKDVDGFHPYNVGRLSQ--RIPKLRSCTPKGIITLLDRYNIQVRGMHAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKDLESHIRQADLVVVAVGKPNFIPGEWIKEGAVV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_VIBF1 (Bifunctional protein folD OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=folD PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 9.399e-51
Identity = 107/215 (49.77%), Postives = 136/215 (63.26%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +RSE+   V+   E   + PGLAVV+VG    SQ YV  KR+AC EVG  S   DLP   SE+EL++ + ELN  P++ GILVQLPLP  ++  K+L  I  EKDVDGFHP N+G+L+   R P    CTPKG + LL R  + ++G  AVVVG SNIVG P++L LL A  T T  H  T D ES +R+AD+V+ A G+   I G WIK GA V
Sbjct:   15 VRSEVGARVKARVEAGLRAPGLAVVLVGQDPASQVYVGSKRRACEEVGFVSKSYDLPTTTSESELLNLIDELNQDPEIDGILVQLPLPAGMDSTKILEHIDPEKDVDGFHPYNVGRLSQ--RIPKLRSCTPKGIITLLDRYNIQVRGMHAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKDLESHIRQADLVVVAVGKPNFIPGEWIKEGAVV 227          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_VIBCH (Bifunctional protein folD OS=Vibrio cholerae GN=folD PE=3 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 9.399e-51
Identity = 109/215 (50.70%), Postives = 136/215 (63.26%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +RSE+A  V+   +   + PGLAVV+VG    SQ YV  KR+AC EVG  S   DLP   SE  L+S V ELN  P + GILVQLPLP  ++  KVL  I  EKDVDGFHP N+G+LA   R P    CTPKG + LL+R  + ++GK AV+VG SNIVG P++L LL A  T T  H  T D E  +R+ADI++ A G+   I G+WIK GA V
Sbjct:   15 VRSEVAARVKARVQAGLRAPGLAVVLVGEDPASQVYVGSKRRACEEVGFVSKSFDLPATASEEALLSLVEELNNDPQIDGILVQLPLPAGMDTTKVLESIHPEKDVDGFHPYNVGRLAQ--RIPKLRSCTPKGIITLLERYNIPLRGKHAVIVGASNIVGRPMTLELLLAGCTTTTCHRFTQDLEGHIRQADILVVAVGKPNFIPGAWIKEGAVV 227          
The following BLAST results are available for this feature:
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_RHOS47.196e-5150.70Bifunctional protein folD OS=Rhodobacter sphaeroid... [more]
FOLD_RHISN7.196e-5152.00Bifunctional protein folD OS=Rhizobium sp. (strain... [more]
FOLD_NEIMA7.196e-5152.13Bifunctional protein folD OS=Neisseria meningitidi... [more]
FOLD_NEIM07.196e-5152.13Bifunctional protein folD OS=Neisseria meningitidi... [more]
FOLD_MAGSA7.196e-5150.70Bifunctional protein folD OS=Magnetospirillum magn... [more]
FOLD_BACCQ7.196e-5149.53Bifunctional protein folD OS=Bacillus cereus (stra... [more]
FOLD_BACC77.196e-5149.53Bifunctional protein folD OS=Bacillus cereus (stra... [more]
FOLD_VIBFM9.399e-5149.77Bifunctional protein folD OS=Vibrio fischeri (stra... [more]
FOLD_VIBF19.399e-5149.77Bifunctional protein folD OS=Vibrio fischeri (stra... [more]
FOLD_VIBCH9.399e-5150.70Bifunctional protein folD OS=Vibrio cholerae GN=fo... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00358 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00358 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623267 ID=BQ623267; Name=BQ623267; organism=Citrus sinensis; type=EST; length=646bp
ATCCGATCTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGG
CAAGGTGCCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCTC
AAAGCTATGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAG
TCTTTTGACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAG
CAAGGTTCACGAGCTTAACGCAATGCCTGATGTACATGGTATATTGGTTC
AACTTCCATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATA
AGCCTTGAGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCT
CGCAATGAAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGAT
GCCTTGAACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGCT
GTTGTGGTGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGCT
GCTGAAAGCTGATGCCACTGTAACCATAGTCCATTCACATACCCCTGATC
CTGAAAGTATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACAA
GCAATGATGATCAAGGGAAGTTGGATCAAGCCTGGTGCTGCTGTTA
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