BQ623270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623270 vs. ExPASy Swiss-Prot
Match: RS5B_DROME (40S ribosomal protein S5b OS=Drosophila melanogaster GN=RpS5b PE=2 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 5.372e-74 Identity = 106/149 (71.14%), Postives = 129/149 (86.58%), Query Frame = 1 Query: 106 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAF 552 ++KLF RW +D+ ++DISL DYI V+ K A Y+PH+AGRY+ KRFRKAQCPIVERLT+ LMM GR+NGKKL+A RIVKHA EIIHLLT +NP+QV V+A++NSGPRED+TRIG AG VRRQAVD+SPLRRVNQAI+L+ TGARE+AF Sbjct: 42 EIKLFGRWACDDISISDISLQDYIAVKE-KFARYLPHSAGRYAAKRFRKAQCPIVERLTSGLMMKGRSNGKKLLACRIVKHAFEIIHLLTSENPLQVTVNAIVNSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLICTGAREAAF 189 HSP 2 Score: 77.0258 bits (188), Expect = 5.372e-74 Identity = 37/39 (94.87%), Postives = 39/39 (100.00%), Query Frame = 2 Query: 551 FRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAK 667 FRNIKT+AECLADELINAAKGSSNSYAIKKKDE+ERVAK Sbjct: 189 FRNIKTVAECLADELINAAKGSSNSYAIKKKDELERVAK 227
BLAST of BQ623270 vs. ExPASy Swiss-Prot
Match: RS5_CAEEL (40S ribosomal protein S5 OS=Caenorhabditis elegans GN=rps-5 PE=1 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 9.148e-74 Identity = 110/155 (70.97%), Postives = 131/155 (84.52%), Query Frame = 1 Query: 88 PSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAF 552 P+ +V LF +W+ + V V+DISL DYI V+ K A Y+PH+AGR+ V+RFRKA CPIVERL NSLMMHGRNNGKKLM VRIVKHA EII+LLT +NP+QV+V+AVINSGPRED+TRIG AG VRRQAVD++PLRRVNQAI+LL TGARE+AF Sbjct: 16 PATEAPEVALFGKWSLQSVNVSDISLVDYIPVKE-KSAKYLPHSAGRFQVRRFRKAACPIVERLANSLMMHGRNNGKKLMTVRIVKHAFEIIYLLTGENPVQVLVNAVINSGPREDSTRIGRAGTVRRQAVDVAPLRRVNQAIWLLCTGAREAAF 169 HSP 2 Score: 77.0258 bits (188), Expect = 9.148e-74 Identity = 37/39 (94.87%), Postives = 39/39 (100.00%), Query Frame = 2 Query: 551 FRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAK 667 FRN+KTIAECLADELINAAKGSSNSYAIKKKDE+ERVAK Sbjct: 169 FRNVKTIAECLADELINAAKGSSNSYAIKKKDELERVAK 207
BLAST of BQ623270 vs. ExPASy Swiss-Prot
Match: RS5_NICPL (40S ribosomal protein S5 (Fragment) OS=Nicotiana plumbaginifolia GN=RPS5 PE=2 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 3.784e-72 Identity = 109/113 (96.46%), Postives = 110/113 (97.35%), Query Frame = 1 Query: 214 HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAF 552 HTAGRY KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTD NPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRV+QAIYLLTTGARESAF Sbjct: 1 HTAGRYQAKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDLNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVSQAIYLLTTGARESAF 113 HSP 2 Score: 78.1814 bits (191), Expect = 3.784e-72 Identity = 39/39 (100.00%), Postives = 39/39 (100.00%), Query Frame = 2 Query: 551 FRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAK 667 FRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAK Sbjct: 113 FRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAK 151
BLAST of BQ623270 vs. ExPASy Swiss-Prot
Match: RS5_YEAST (40S ribosomal protein S5 OS=Saccharomyces cerevisiae GN=RPS5 PE=1 SV=3) HSP 1 Score: 219.935 bits (559), Expect = 4.109e-71 Identity = 105/157 (66.88%), Postives = 130/157 (82.80%), Query Frame = 1 Query: 82 QDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAF 552 ++ Q ++KLFN+W+FE+V+V D SL DY+ V + +V HTAGRY+ KRFRKAQCPI+ERLTNSLMM+GRNNGKKL AVRI+KH ++II++LTDQNPIQV+VDA+ N+GPRED TR+G G RRQAVD+SPLRRVNQAI LLT GARE+AF Sbjct: 31 EEVQQAQTEIKLFNKWSFEEVEVKDASLVDYVQV---RQPIFVAHTAGRYANKRFRKAQCPIIERLTNSLMMNGRNNGKKLKAVRIIKHTLDIINVLTDQNPIQVVVDAITNTGPREDTTRVGGGGAARRQAVDVSPLRRVNQAIALLTIGAREAAF 184 HSP 2 Score: 69.707 bits (169), Expect = 4.109e-71 Identity = 35/39 (89.74%), Postives = 37/39 (94.87%), Query Frame = 2 Query: 551 FRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAK 667 FRNIKTIAE LA+ELINAAKGSS SYAIKKKDE+ERVAK Sbjct: 184 FRNIKTIAETLAEELINAAKGSSTSYAIKKKDELERVAK 222
BLAST of BQ623270 vs. ExPASy Swiss-Prot
Match: RS5B_SCHPO (40S ribosomal protein S5-B OS=Schizosaccharomyces pombe GN=rps5b PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 4.096e-68 Identity = 106/148 (71.62%), Postives = 124/148 (83.78%), Query Frame = 1 Query: 109 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAF 552 +KLFN++ FE V+V DISL DYI + + +PHTAGR+ KRFRKA+C IVERLTNSLMM+GRNNGKKL+A RIVKHA EII LLTDQNP+QV+VDAV GPRED+TRIGSAG VRRQAVD+SPLRRVNQA+ L+T GARE+AF Sbjct: 18 IKLFNKFPFEGVEVKDISLVDYITIGNGQP---LPHTAGRFQTKRFRKARCFIVERLTNSLMMNGRNNGKKLLATRIVKHAFEIIALLTDQNPLQVLVDAVAACGPREDSTRIGSAGTVRRQAVDVSPLRRVNQALALITIGAREAAF 162 HSP 2 Score: 72.0182 bits (175), Expect = 4.096e-68 Identity = 33/39 (84.62%), Postives = 39/39 (100.00%), Query Frame = 2 Query: 551 FRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAK 667 FRN+K+I+ECLA+E+INAAKGSSNSYAIKKKDE+ERVAK Sbjct: 162 FRNVKSISECLAEEIINAAKGSSNSYAIKKKDELERVAK 200
BLAST of BQ623270 vs. ExPASy Swiss-Prot
Match: RS5A_SCHPO (40S ribosomal protein S5-A OS=Schizosaccharomyces pombe GN=rps5a PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 4.096e-68 Identity = 106/148 (71.62%), Postives = 124/148 (83.78%), Query Frame = 1 Query: 109 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAF 552 +KLFN++ FE V+V DISL DYI + + +PHTAGR+ KRFRKA+C IVERLTNSLMM+GRNNGKKL+A RIVKHA EII LLTDQNP+QV+VDAV GPRED+TRIGSAG VRRQAVD+SPLRRVNQA+ L+T GARE+AF Sbjct: 18 IKLFNKFPFEGVEVKDISLVDYITIGNGQP---LPHTAGRFQTKRFRKARCFIVERLTNSLMMNGRNNGKKLLATRIVKHAFEIIALLTDQNPLQVLVDAVAACGPREDSTRIGSAGTVRRQAVDVSPLRRVNQALALITIGAREAAF 162 HSP 2 Score: 72.0182 bits (175), Expect = 4.096e-68 Identity = 33/39 (84.62%), Postives = 39/39 (100.00%), Query Frame = 2 Query: 551 FRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAK 667 FRN+K+I+ECLA+E+INAAKGSSNSYAIKKKDE+ERVAK Sbjct: 162 FRNVKSISECLAEEIINAAKGSSNSYAIKKKDELERVAK 200
BLAST of BQ623270 vs. ExPASy Swiss-Prot
Match: RS5_DICDI (40S ribosomal protein S5 OS=Dictyostelium discoideum GN=rps5 PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 2.004e-64 Identity = 99/149 (66.44%), Postives = 121/149 (81.21%), Query Frame = 1 Query: 106 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAF 552 +V LF +W++ V DISL DYI V K + PH+AGRY+ RFRKAQCPIVERL NS+MM GRN GKK+MAVRI++ A EII+LLTD+NP+QV+V+AV+NSGPRED+TRIGSAG VRRQAVD+SP+RRVN A+YLLT G R +AF Sbjct: 4 EVALFGKWSYSGVTCPDISLQDYICV---KKNVFTPHSAGRYNKVRFRKAQCPIVERLANSMMMFGRNAGKKVMAVRIIEQAFEIIYLLTDKNPLQVLVEAVMNSGPREDSTRIGSAGTVRRQAVDVSPMRRVNHAVYLLTQGTRAAAF 149 HSP 2 Score: 66.2402 bits (160), Expect = 2.004e-64 Identity = 30/39 (76.92%), Postives = 36/39 (92.31%), Query Frame = 2 Query: 551 FRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAK 667 FRNI+T+AECLADELINA+KGS NSY+IK+KD +ER AK Sbjct: 149 FRNIRTVAECLADELINASKGSPNSYSIKQKDALERTAK 187
BLAST of BQ623270 vs. ExPASy Swiss-Prot
Match: RS5_ENTHI (40S ribosomal protein S5 (Fragment) OS=Entamoeba histolytica PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.292e-44 Identity = 68/106 (64.15%), Postives = 88/106 (83.02%), Query Frame = 1 Query: 235 VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAF 552 +K FRK QCPIVERL +M HG+N+GKKL+A+R+V+ + EIIHLLT++NPIQV+VDA+IN+ PRED+TR+G+ G VR QAVD+SPLRR+N A+YLL G R AF Sbjct: 2 IKPFRKIQCPIVERLVCCMMQHGKNSGKKLLAMRVVEESFEIIHLLTEKNPIQVLVDAIINASPREDSTRVGTGGNVRGQAVDVSPLRRINHALYLLIMGCRCGAF 107 HSP 2 Score: 53.9138 bits (128), Expect = 1.292e-44 Identity = 23/38 (60.53%), Postives = 33/38 (86.84%), Query Frame = 2 Query: 551 FRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVA 664 FRN K++AECLADE++NA+K + S+AI KK+++ERVA Sbjct: 107 FRNSKSLAECLADEIVNASKSYTGSFAIMKKEDLERVA 144
BLAST of BQ623270 vs. ExPASy Swiss-Prot
Match: RS7_AERPE (30S ribosomal protein S7P OS=Aeropyrum pernix GN=rps7p PE=3 SV=3) HSP 1 Score: 143.28 bits (360), Expect = 1.506e-42 Identity = 72/149 (48.32%), Postives = 101/149 (67.79%), Query Frame = 1 Query: 109 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFS 555 ++LF +W++ V+V D SL YI ++ ++PHT GR+ +RF KA+ PIVERL N LM GRN GKK +A IVK A +II+ T +NPIQV+V A+ NS PRED T+I G+ R +VD++P RRV+QA+ + GAR+ AF+ Sbjct: 21 IRLFGKWSWVGVEVRDPSLKRYINLKPV----WLPHTGGRHEKRRFGKAEVPIVERLMNKLMRPGRNGGKKHLAYNIVKTAFDIIYFETGENPIQVLVKAIENSAPREDTTKITYGGITYRVSVDVAPQRRVDQALKFIADGARQCAFN 165 HSP 2 Score: 50.8322 bits (120), Expect = 1.506e-42 Identity = 24/38 (63.16%), Postives = 30/38 (78.95%), Query Frame = 2 Query: 551 FRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVA 664 F N K I ECLA+ELI AA+G SYAI++K+EIER+A Sbjct: 164 FNNPKPIEECLAEELILAARGDPRSYAIRQKEEIERIA 201
BLAST of BQ623270 vs. ExPASy Swiss-Prot
Match: RS5_ENCCU (40S ribosomal protein S5 OS=Encephalitozoon cuniculi GN=RPS5 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 3.608e-41 Identity = 70/149 (46.98%), Postives = 102/149 (68.46%), Query Frame = 1 Query: 106 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAF 552 ++ LF ++++E+V+VN++SL YI + VPH A + KA+ PI ER SLM HGRN+GKK +A+ I + A IIH +T +NP+QV+VDA++NSGPRED RIG AG +RR +VD+SPL+R++ AI L+ G R ++F Sbjct: 22 EINLFEKYSYEEVKVNNVSLRPYINLS---RRGIVPHAATTITKGTTGKARIPIAERFVCSLMRHGRNSGKKRLAINIFEDACFIIHSMTKKNPLQVLVDAIVNSGPREDTARIGRAGSMRRTSVDVSPLKRISIAISNLSAGIRNASF 167 HSP 2 Score: 49.2914 bits (116), Expect = 3.608e-41 Identity = 24/42 (57.14%), Postives = 31/42 (73.81%), Query Frame = 2 Query: 542 NLLFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAK 667 N FRN T+AE +A+ELI A+ S NSYA+ KK EIER+A+ Sbjct: 164 NASFRNRITLAEAIANELIAASTNSQNSYAVNKKKEIERIAQ 205 The following BLAST results are available for this feature:
BLAST of BQ623270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623270 ID=BQ623270; Name=BQ623270; organism=Citrus sinensis; type=EST; length=667bpback to top |