BQ623275
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623275 vs. ExPASy Swiss-Prot
Match: SPAST_CHICK (Spastin OS=Gallus gallus GN=SPAST PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.703e-11 Identity = 45/149 (30.20%), Postives = 80/149 (53.69%), Query Frame = 3 Query: 3 LVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE-ELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQVCASVSSESTNMNELLQWNELYGE 446 LV+ ATNRP +LD+AV+RR +R+ V+LP+ R +++ +L+K+ + +L +A M DGYSGSDL L AA P S+ ++R +K+ DF + +++ S+S ++ + ++WN+ +G+ Sbjct: 478 LVMGATNRPQELDDAVLRRFTKRVYVSLPNEETRLILLKNLLSKQGSPLTQKELAQLARMTDGYSGSDLTALVKDAALGPIRELKPEQVKN--------------MSASEMRNIKLSDFTESLKKIKRSLSPQT--LEAYIRWNKDFGD 610
BLAST of BQ623275 vs. ExPASy Swiss-Prot
Match: SPAST_PIG (Spastin (Fragment) OS=Sus scrofa GN=SPAST PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 4.837e-11 Identity = 45/149 (30.20%), Postives = 79/149 (53.02%), Query Frame = 3 Query: 3 LVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE-ELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQVCASVSSESTNMNELLQWNELYGE 446 LV+ ATNRP +LDEAV+RR +R+ V+LP+ R +++ +L K+ + +L +A + DGYSGSDL L AA P S+ ++R +++ DF + +++ SVS ++ + ++WN+ +G+ Sbjct: 478 LVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARLTDGYSGSDLTALAKDAALGPIRELKPEQVKN--------------MSASEMRNIRLSDFTESLKKIKRSVSPQT--LEAYIRWNKDFGD 610
BLAST of BQ623275 vs. ExPASy Swiss-Prot
Match: SPAST_DROPS (Spastin OS=Drosophila pseudoobscura pseudoobscura GN=spas PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.837e-11 Identity = 37/77 (48.05%), Postives = 50/77 (64.94%), Query Frame = 3 Query: 3 LVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVD-LEGIANMADGYSGSDLKNLCVTAA 230 +VLAATNRP +LDEA +RR +R+ V+LPD RE ++ +L K+ D D L ++ + DGYSGSDL L AA Sbjct: 653 VVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTDALRRLSKITDGYSGSDLTALAKDAA 729
BLAST of BQ623275 vs. ExPASy Swiss-Prot
Match: SPAST_BRUMA (Probable spastin homolog Bm1_53365 OS=Brugia malayi GN=Bm1_53365 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.837e-11 Identity = 43/133 (32.33%), Postives = 70/133 (52.63%), Query Frame = 3 Query: 3 LVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDL---EGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQVCASVS 392 LV+ ATNRP +LD A++RR P+R+++++P+A R K+I +L K + + D+ L + +A GYS SDL LC AA P +R S ++RP+ + DF+ A + + S + Sbjct: 318 LVIGATNRPEELDSAILRRFPKRILIDVPNAAARLKLIMSLLEKTKTSFDLGLTQRQILAEWTHGYSNSDLVALCREAAMVP--------------IRDLSRKDIKNLVSTELRPITLRDFEIAMKAIKPSTN 436
BLAST of BQ623275 vs. ExPASy Swiss-Prot
Match: SPAST_BOVIN (Spastin OS=Bos taurus GN=SPAST PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.837e-11 Identity = 45/149 (30.20%), Postives = 79/149 (53.02%), Query Frame = 3 Query: 3 LVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE-ELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQVCASVSSESTNMNELLQWNELYGE 446 LV+ ATNRP +LDEAV+RR +R+ V+LP+ R +++ +L K+ + +L +A M +GYSGSDL L AA P S+ ++R +++ DF + +++ SVS ++ + ++WN+ +G+ Sbjct: 479 LVMGATNRPQELDEAVLRRFTKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTNGYSGSDLTALAKDAALGPIRELKPEQVKN--------------MSASEMRNIRLSDFTESLKKIKRSVSPQT--LEAYIRWNKDFGD 611
BLAST of BQ623275 vs. ExPASy Swiss-Prot
Match: FIGL1_CAEBR (Fidgetin-like protein 1 OS=Caenorhabditis briggsae GN=figl-1 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.837e-11 Identity = 37/81 (45.68%), Postives = 53/81 (65.43%), Query Frame = 3 Query: 3 LVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVIL--AKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCP 239 LVL ATNRP +LDEA RR +RL + LP+ +R +I+ +L + E+ +D +LE I + DGYSG+D++ LC AA P Sbjct: 455 LVLGATNRPQELDEAARRRFQKRLYIALPEPDSRTQIVENLLRGTRHEI-TDHNLEKIRRLTDGYSGADMRQLCTEAAMGP 534 The following BLAST results are available for this feature:
BLAST of BQ623275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623275 ID=BQ623275; Name=BQ623275; organism=Citrus sinensis; type=EST; length=602bpback to top |