BQ623277
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623277 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.148e-16 Identity = 60/152 (39.47%), Postives = 76/152 (50.00%), Query Frame = 3 Query: 3 WAMLGALGCVFPEILSKNGVKFGEAVWFKAGA-QIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIENLYDHIADPVANN 452 WAML G + PE L G W KA +G YLGNP + ++ I A + + + F E R AFDPLG + DP +F ELK+KE+KNGRLAM + GF V Q+ G GP+ENL H+ADP NN Sbjct: 93 WAMLCVPGVLVPEAL-------GLGNWVKAQEWAALPDGQATYLGNP--VPWGNLPTILAIEFLAIAFAEQQRTMEKDPEKKKYPGG---AFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 232
BLAST of BQ623277 vs. ExPASy Swiss-Prot
Match: CB4A_ARATH (Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.1 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.825e-15 Identity = 54/147 (36.73%), Postives = 78/147 (53.06%), Query Frame = 3 Query: 3 WAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPV 443 WAML LG + E L+ GV W AG +G YLG P +++ I +V+++G++E R FDPLGLA DP++ A+L++ E+K+ RLAM + GF VQA TGKGP+ N H++DP+ Sbjct: 146 WAMLATLGALSVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPFSISTLIWI---EVLVIGYIEFQR--NAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 279
BLAST of BQ623277 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.301e-15 Identity = 54/153 (35.29%), Postives = 73/153 (47.71%), Query Frame = 3 Query: 3 WAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA-----CQVVLMGFVEGYRIXXXXXXXXXXXXXXXXA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADP 440 WAMLGA G PE+L+K G+ W+ AG Q + + L + +L WA ++ G V I FDPLG P + EL+ KE+KNGRLAM ++ G + Q I TG GPI+NL+ H+ADP Sbjct: 113 WAMLGAAGIFIPELLTKIGI-LNTPSWYTAGEQEY------FTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258
BLAST of BQ623277 vs. ExPASy Swiss-Prot
Match: CB4B_ARATH (Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.075e-14 Identity = 54/147 (36.73%), Postives = 76/147 (51.70%), Query Frame = 3 Query: 3 WAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPV 443 WAML LG + E L+ GV W AG +G YLG P +++ I +V+++G++E R FDPLGLA DP + A+L++ E+K+ RLAM GF VQA TGKGP+ N H++DP+ Sbjct: 143 WAMLATLGAITVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPFSISTLIWI---EVLVIGYIEFQR--NAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPL 276
BLAST of BQ623277 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.075e-14 Identity = 55/153 (35.95%), Postives = 72/153 (47.06%), Query Frame = 3 Query: 3 WAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA-----CQVVLMGFVEGYRIXXXXXXXXXXXXXXXXA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADP 440 WAMLGA G PE L+K GV W+ AG Q + + L + +L WA ++ G V I FDPLG P + EL+ KE+KNGRLAM ++ G + Q I TG GPI+NL+ H+ADP Sbjct: 113 WAMLGAAGIFIPEFLTKIGV-LNTPSWYTAGEQEY------FTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258
BLAST of BQ623277 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.314e-12 Identity = 56/150 (37.33%), Postives = 69/150 (46.00%), Query Frame = 3 Query: 3 WAMLGALGCVFPEILSKNGVKFGEAVWFKAGA-QIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVAN 449 WAMLG G + PE+ +K G+ W+ AG Q F+ ++ L H I W + G V I F+PL A P Q E K KEL NGRLAM + GF VQ VTGKGP ENL H++DP N Sbjct: 102 WAMLGVAGMLLPEVFTKIGI-INVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPKGEVGYPGGIFNPLNFA--PTQ--EAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHN 244
BLAST of BQ623277 vs. ExPASy Swiss-Prot
Match: CB4C_ARATH (Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.3 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.453e-11 Identity = 50/139 (35.97%), Postives = 70/139 (50.36%), Query Frame = 3 Query: 3 WAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL 419 WAMLG LG + E L+ G+ W AG EG YLG P +++ I +V+++G++E R FDPLGLA DP++ LK+ E+K+ RLAM + F +QA TGKGP+ L Sbjct: 147 WAMLGTLGAIAVEALT--GI-----AWQDAGKVELVEGS-SYLGQPLPFSLTTLIWI---EVLVVGYIEFQR---NSELDPEKRIYPGGYFDPLGLAADPEKLDTLKLAEIKHSRLAMVAFLIFALQAAFTGKGPVSFL 271 The following BLAST results are available for this feature:
BLAST of BQ623277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623277 ID=BQ623277; Name=BQ623277; organism=Citrus sinensis; type=EST; length=646bpback to top |