BQ623278

Overview
NameBQ623278
Unique NameBQ623278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5158 contig Csv1_Contig5158:245..948. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.662e-17
Identity = 51/117 (43.59%), Postives = 69/117 (58.97%), Query Frame = 3
Query:    9 SVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEI 359
            S +T+AG+ GY+ PEY  S + + K DVYSYGVV+LE+LTGK+P D       ++V WVK   K++   V D  L     +   E++Q L VA  C++  P  RPTM  V AM  EI
Sbjct:  953 SSNTIAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGLHIVDWVK---KIRDIQVIDQGLQARPESEVEEMMQTLGVALLCINPIPEDRPTMKDVAAMLSEI 1066          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.953e-17
Identity = 52/116 (44.83%), Postives = 68/116 (58.62%), Query Frame = 3
Query:   21 LAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQH--AKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQ 362
            +AG+ GY+ PE+    R + K DVYSYGVVLLE+LTGK P D    G  +LV WV+ H   K   S + DP L     +I  E+LQ L VA  C+ ++   RP M  V+AM  EI+
Sbjct:  927 MAGSYGYMAPEHASMQRITEKSDVYSYGVVLLEVLTGKHPLDPDLPGGAHLVKWVRDHLAEKKDPSRLLDPRLDGRTDSIMHEMLQTLAVAFLCVSNKANERPLMKDVVAMLTEIR 1042          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.039e-16
Identity = 54/136 (39.71%), Postives = 78/136 (57.35%), Query Frame = 3
Query:    9 SVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLK-ISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDSQSTIATDEGG 413
            S+S +AG+ GY+ PEY  + R + K D+YS+GVV+LE++T KRP D  + G+ +LV WV      K I  V DP+L   D   + E+ + L+V   C    P  RP+M +V+ M +EI  G   DS   I  D+ G
Sbjct:  849 SMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILEIVTRKRPVD-PELGEKDLVKWVCSTLDQKGIEHVIDPKL---DSCFKEEISKILNVGLLCTSPLPINRPSMRRVVKMLQEI-GGGDEDSLHKIRDDKDG 979          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.357e-16
Identity = 50/116 (43.10%), Postives = 68/116 (58.62%), Query Frame = 3
Query:   15 STLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQ 362
            +T+AG+ GY+ PEY  S + + K DVYSYGVV+LE+LTGK+P D       +LV WV+Q+      +V D  L         E++Q L  A  C++  P  RPTM  V AM KEI+
Sbjct:  954 NTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTVPEGIHLVDWVRQNR--GSLEVLDSTLRSRTEAEADEMMQVLGTALLCVNSSPDERPTMKDVAAMLKEIK 1067          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.733e-16
Identity = 51/117 (43.59%), Postives = 72/117 (61.54%), Query Frame = 3
Query:   21 LAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD-SADFGDNNLVGWVKQHAK-LKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQA 365
            L GT GY+PPEY Q++  + +GDVYS+GVV+LELLTGKRP +         LV WV    +  K  +VFD  L++E  N E  +L+ L +A  C++  P +RP + QV+   K I+A
Sbjct:  965 LVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGKRPMEVFRPKMSRELVAWVHTMKRDGKPEEVFD-TLLRESGN-EEAMLRVLDIACMCVNQNPMKRPNIQQVVDWLKNIEA 1079          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.148e-15
Identity = 45/119 (37.82%), Postives = 70/119 (58.82%), Query Frame = 3
Query:    9 SVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGD-NNLVGWVKQHAKLK--ISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKE 356
            S+S +AG+ GY+ PEY  + +   K D+YSYGV+LLE++TGKR  +  +FG+ N++V WV+   K K  + +V D  + +    I  E+ Q L +A  C    P  RP M  V+ + +E
Sbjct:  882 SMSVVAGSYGYIAPEYAYTLQVDKKSDIYSYGVILLEIITGKRSVE-PEFGEGNSIVDWVRSKLKTKEDVEEVLDKSMGRSCSLIREEMKQMLRIALLCTSRSPTDRPPMRDVLLILQE 999          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.959e-15
Identity = 52/135 (38.52%), Postives = 73/135 (54.07%), Query Frame = 3
Query:    9 SVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAK--LKISDVFDPELMK-EDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDSQSTIATD 404
            SVS +AG+ GY+ PEY  + + + K D+YS+GVVLLELLTGK P    + G  +L  W + H +     S++ DP L K ED  I   ++    +A  C    P  RPTM +V+ M  E    +G    ST  +D
Sbjct:  984 SVSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELLTGKAPVQPLEQG-GDLATWTRNHIRDHSLTSEILDPYLTKVEDDVILNHMITVTKIAVLCTKSSPSDRPTMREVVLMLIESGERAGKVIVSTTCSD 1117          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.558e-15
Identity = 48/120 (40.00%), Postives = 71/120 (59.17%), Query Frame = 3
Query:   12 VSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDN-NLVGWVKQHAKL-KISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQA 365
            V+ + GTPGYV PEYY +F+ + K DVYS+G+VLLEL+TGKR     D G+  N+V +V+   K+  I  V DP L  +  +      + + VA +C+ DR   RP   Q+++  K+  A
Sbjct:  738 VTAVMGTPGYVDPEYYNTFKLNEKSDVYSFGIVLLELITGKRSIMKTDDGEKMNVVHYVEPFLKMGDIDGVVDPRLHGDFSS--NSAWKFVEVAMSCVRDRGTNRPNTNQIVSDLKQCLA 855          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: IMK2_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase IMK2 OS=Arabidopsis thaliana GN=IMK2 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.341e-15
Identity = 50/129 (38.76%), Postives = 75/129 (58.14%), Query Frame = 3
Query:    9 SVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLK-ISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDSQST 392
            +V   AGT GY  PE+ +    S K DVYS G+++LELLTGK P +  +  D  L  WV    K +  ++VFD ELM+E  ++  ELL  L +A  C+D  P  RP   QV+   +EI+  + +++++T
Sbjct:  693 NVIATAGTLGYRAPEFSKIKNASAKTDVYSLGIIILELLTGKSPGEPTNGMD--LPQWVASIVKEEWTNEVFDLELMRETQSVGDELLNTLKLALHCVDPSPAARPEANQVVEQLEEIRPETEVETETT 819          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.699e-15
Identity = 56/163 (34.36%), Postives = 90/163 (55.21%), Query Frame = 3
Query:    3 HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFG-DNNLVGWVKQ-HAKLKISDVFDPELMKEDPNIEIELLQHL-HVASACLDDRPWRRPTMIQVMAMFKE---IQAG--SGLDSQSTIATDEGGFGTVEMVEMSIQEAPELS 467
            H+S S   GT GY+ PEYY S + + K DVYS+GVVL ELL+GK+P  + DFG + N+V W +    K  +  + DP +     N++IE +  +  VA+ C++ R   RP M +V+   ++   I+ G  +GL S S+ ++         +      E+P++S
Sbjct:  762 HVS-SVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFGPELNIVHWARSLIRKGDVCGIIDPCIAS---NVKIESVWRVAEVANQCVEQRGHNRPRMQEVIVAIQDAIRIERGNENGLKSSSSSSSKAQSSRKTLLTSFLELESPDIS 920          
The following BLAST results are available for this feature:
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
RCH1_ARATH4.662e-1743.59LRR receptor-like serine/threonine-protein kinase ... [more]
Y4265_ARATH7.953e-1744.83Probable LRR receptor-like serine/threonine-protei... [more]
HSL1_ARATH1.039e-1639.71Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]
RCH2_ARATH1.357e-1643.10Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
PSYR1_ARATH6.733e-1643.59Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
Y5148_ARATH1.148e-1537.82Probable leucine-rich repeat receptor-like protein... [more]
Y2317_ARATH1.959e-1538.52Probable leucine-rich repeat receptor-like protein... [more]
Y4291_ARATH2.558e-1540.00Probable LRR receptor-like serine/threonine-protei... [more]
IMK2_ARATH3.341e-1538.76Probably inactive leucine-rich repeat receptor-lik... [more]
Y1677_ARATH5.699e-1534.36Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00369 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00369 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623278 ID=BQ623278; Name=BQ623278; organism=Citrus sinensis; type=EST; length=704bp
CACATTTGAGTGTCAGTACGCTAGCAGGCACACCCGGCTATGTCCCTCCC
GAATACTATCAAAGCTTTAGATGTTCGACGAAAGGCGATGTTTACAGTTA
TGGTGTAGTTTTGCTCGAGTTGCTAACGGGAAAAAGGCCAACAGATTCAG
CAGATTTCGGTGACAATAACCTAGTTGGGTGGGTAAAGCAGCATGCGAAG
CTGAAAATAAGCGATGTCTTTGATCCAGAACTCATGAAGGAGGATCCAAA
CATCGAGATTGAGCTTCTTCAACACTTGCATGTAGCGAGTGCTTGCCTGG
ATGATCGACCATGGAGGAGACCGACAATGATTCAGGTTATGGCAATGTTT
AAAGAAATCCAAGCCGGTTCAGGACTTGACTCGCAATCTACTATTGCCAC
TGATGAAGGAGGTTTCGGTACAGTCGAAATGGTAGAGATGAGCATCCAAG
AAGCTCCAGAACTAAGCACCAAGCCTTAAGCCATTCAATTTTCAGGACAA
GCATTCTTTCAGTGCCCCAAAATTTTCCCACTTGAAAACCAAAAAAGTTG
CCTTTGTATCTCTACCATTTAGTGTATGTAATCTTTGTATCCCTTTTGAA
AATTCTTGTTATTTATACATAAAAAAAAAAAAGTTGCTTTTAACTTTGTT
ATCGAATGTGTAAATATACAACCCCAAGTTTGTTATGCTATCTTGGTTCT
TTAA
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