BQ623278

Overview
NameBQ623278
Unique NameBQ623278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.699e-15
Identity = 45/107 (42.06%), Postives = 73/107 (68.22%), Query Frame = 3
Query:   27 GTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD-SADFGDNNLVGWV-KQHAKLKISDVFDPELMKEDPNIEIELLQHL-HVASACLDDRPWRRPTMIQV 338
            GT GY+ PEYY++F+ + K DVYS+GVVLLE++T K+  D + +  D NLV ++ K   + ++++  DP L K    I+++ +Q L ++ASACL++R   RP+M +V
Sbjct:  533 GTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVTSKKAIDFTREEEDVNLVMYINKMMDQERLTECIDPLLKKTANKIDMQTIQQLGNLASACLNERRQNRPSMKEV 639          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: IKU2_ARATH (Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana GN=IKU2 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.722e-15
Identity = 55/145 (37.93%), Postives = 79/145 (54.48%), Query Frame = 3
Query:    9 SVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNN-LVGWVKQHAK-------LKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQ----AGSGLDSQSTIATDE 407
            S   + GT GY+ PEY  + + + K DVYS+GVVL+EL+TGK+P ++ DFG+NN +V WV   +K       +K+ D    +  KED       L+ L +A  C D  P  RP M  V++M ++I+      SG  S    A DE
Sbjct:  849 SAPLVKGTLGYIAPEYAYTTKVNEKSDVYSFGVVLMELVTGKKPLET-DFGENNDIVMWVWSVSKETNREMMMKLIDTSIEDEYKED------ALKVLTIALLCTDKSPQARPFMKSVVSMLEKIEPSYNKNSGEASYGESANDE 986          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: Y2242_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana GN=At2g24230 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.270e-14
Identity = 47/120 (39.17%), Postives = 70/120 (58.33%), Query Frame = 3
Query:   27 GTPGYVPPEYYQSFR--CSTKGDVYSYGVVLLELLTGKRP--TDSADFGDNNLVGWVKQHA-KLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGS 371
            G+PGY+PPE+ Q      + K DVY +GVVL EL+TGK+P   D  D  D NLV WV+    K + S   DP++  ++   E ++ + L +   C  D P +RP+M QV+ + K+I+  S
Sbjct:  734 GSPGYLPPEFLQPEHELPTPKSDVYCFGVVLFELMTGKKPIEDDYLDEKDTNLVSWVRSLVRKNQASKAIDPKI--QETGSEEQMEEALKIGYLCTADLPSKRPSMQQVVGLLKDIEPKS 851          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: Y5830_ARATH (Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana GN=At5g58300 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.166e-14
Identity = 51/121 (42.15%), Postives = 74/121 (61.16%), Query Frame = 3
Query:   36 GYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDN-NLVGWVKQHAKLK-ISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDSQST 392
            GY  PE  ++ + + K DVYS+GV++LE+LTGK P  S    D  +L  WV+   + +  S+VFD ELM+   NIE E++Q L +A AC+   P  RPTM  V+ M +EI+     DS++T
Sbjct:  521 GYRAPEVMETRKHTHKSDVYSFGVLILEMLTGKSPVQSPSRDDMVDLPRWVQSVVREEWTSEVFDIELMRFQ-NIEEEMVQMLQIAMACVAQVPEVRPTMDDVVRMIEEIRVS---DSETT 637          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: Y3868_ARATH (Probable inactive receptor kinase At3g08680 OS=Arabidopsis thaliana GN=At3g08680 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.166e-14
Identity = 48/127 (37.80%), Postives = 78/127 (61.42%), Query Frame = 3
Query:   36 GYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDN-NLVGWVKQHAKLK-ISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQ-AGSGLDSQSTIATDE 407
            GY  PE  ++ + + K DVYS+GV+LLE+LTGK    +    +  +L  WV+   + +   +VFD EL+K+  N+E E++Q L +A AC+   P  RP+M +V+ M +EI+ +GSG  S +  ++ E
Sbjct:  505 GYRAPEAIETRKHTQKSDVYSFGVLLLEMLTGKAAGKTTGHEEVVDLPKWVQSVVREEWTGEVFDVELIKQQHNVEEEMVQMLQIAMACVSKHPDSRPSMEEVVNMMEEIRPSGSGPGSGNRASSPE 631          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.166e-14
Identity = 52/150 (34.67%), Postives = 80/150 (53.33%), Query Frame = 3
Query:   36 GYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDN--NLVGWVKQHAKLK-ISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDSQSTIATDEGGFGTVEMVEMSIQEAPELSTKP 476
            GY  PE  ++ + + K DVYS+GV+LLELLTGK P + A  G+   +L  WV    + +  ++VFD ELM+   NIE E++Q L +A AC+   P +RP M +V+ M +++      D     ++D+   G+           P  S  P
Sbjct:  511 GYHAPEVLETRKVTFKSDVYSFGVLLLELLTGKSP-NQASLGEEGIDLPRWVLSVVREEWTAEVFDVELMRYH-NIEEEMVQLLQIAMACVSTVPDQRPVMQEVLRMIEDVNRSETTDDGLRQSSDDPSKGSEGQTPPGESRTPPRSVTP 658          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: Y1719_ARATH (Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana GN=At1g27190 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.829e-14
Identity = 47/121 (38.84%), Postives = 66/121 (54.55%), Query Frame = 3
Query:   27 GTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRP---TDSADFGDNNLVGWVKQHAKL-KISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGL 377
            G  GYV PEY  +   S KGDVY +G+VLLEL+TG++P    +  +    +LV WV Q+    +  D  D  +   D   + E+LQ L +A +C+  RP  RPTMIQV    K +    G+
Sbjct:  467 GELGYVAPEYSSTMVASLKGDVYGFGIVLLELVTGQKPLSVINGVEGFKGSLVDWVSQYLGTGRSKDAIDRSIC--DKGHDEEILQFLKIACSCVVSRPKERPTMIQVYESLKNMADKHGV 585          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14
Identity = 46/114 (40.35%), Postives = 72/114 (63.16%), Query Frame = 3
Query:   21 LAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDN-NLVGWVK-QHAKLKISDVFDPELMKEDPNIEIELLQH-LHVASACLDDRPWRRPTMIQVMAMFK 353
            +AGT GY+ PEY QS R + K DVYS+GV++LE+L+GKRPTD++      N+VGW+K   ++ +  D+ DP        +++E L   L +A+ C+   P  RPTM +V+ + +
Sbjct:  465 VAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNVVGWLKFLISEKRPRDIVDPNC----EGMQMESLDALLSIATQCVSPSPEERPTMHRVVQLLE 574          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 8.230e-14
Identity = 44/122 (36.07%), Postives = 68/122 (55.74%), Query Frame = 3
Query:    3 HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKL--KISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQ 362
            H ++S +AG+ GY+ PEY  +   + K DVYSYGVVLLE+L+G+   +       ++V WVK+          V D +L      I  E+LQ L +A  C++  P  RPTM +V+ +  E++
Sbjct:  932 HNAMSRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILSGRSAVEPQIGDGLHIVEWVKKKMGTFEPALSVLDVKLQGLPDQIVQEMLQTLGIAMFCVNPSPVERPTMKEVVTLLMEVK 1053          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.075e-13
Identity = 46/115 (40.00%), Postives = 72/115 (62.61%), Query Frame = 3
Query:   21 LAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGD-NNLVGWVKQ-HAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEI 359
            L GT GY+PPEY QS   + +GDVYS+GVVLLEL+TG+RP +        +LV  V Q  A+ + +++ D  + +E+ N E  +L+ L +A  C+D  P RRP + +V+   +++
Sbjct:  916 LVGTLGYIPPEYSQSLIATCRGDVYSFGVVLLELVTGRRPVEVCKGKSCRDLVSRVFQMKAEKREAELIDTTI-RENVN-ERTVLEMLEIACKCIDHEPRRRPLIEEVVTWLEDL 1028          
The following BLAST results are available for this feature:
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
WAKLQ_ARATH5.699e-1542.06Wall-associated receptor kinase-like 20 OS=Arabido... [more]
IKU2_ARATH9.722e-1537.93Receptor-like protein kinase HAIKU2 OS=Arabidopsis... [more]
Y2242_ARATH1.270e-1439.17Probable LRR receptor-like serine/threonine-protei... [more]
Y5830_ARATH2.166e-1442.15Probable inactive receptor kinase At5g58300 OS=Ara... [more]
Y3868_ARATH2.166e-1437.80Probable inactive receptor kinase At3g08680 OS=Ara... [more]
Y2267_ARATH2.166e-1434.67Probable inactive receptor kinase At2g26730 OS=Ara... [more]
Y1719_ARATH2.829e-1438.84Probable inactive receptor kinase At1g27190 OS=Ara... [more]
FEI1_ARATH4.825e-1440.35LRR receptor-like serine/threonine-protein kinase ... [more]
Y1341_ARATH8.230e-1436.07Probable LRR receptor-like serine/threonine-protei... [more]
PSKR2_ARATH1.075e-1340.00Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00369 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00369 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623278 ID=BQ623278; Name=BQ623278; organism=Citrus sinensis; type=EST; length=704bp
CACATTTGAGTGTCAGTACGCTAGCAGGCACACCCGGCTATGTCCCTCCC
GAATACTATCAAAGCTTTAGATGTTCGACGAAAGGCGATGTTTACAGTTA
TGGTGTAGTTTTGCTCGAGTTGCTAACGGGAAAAAGGCCAACAGATTCAG
CAGATTTCGGTGACAATAACCTAGTTGGGTGGGTAAAGCAGCATGCGAAG
CTGAAAATAAGCGATGTCTTTGATCCAGAACTCATGAAGGAGGATCCAAA
CATCGAGATTGAGCTTCTTCAACACTTGCATGTAGCGAGTGCTTGCCTGG
ATGATCGACCATGGAGGAGACCGACAATGATTCAGGTTATGGCAATGTTT
AAAGAAATCCAAGCCGGTTCAGGACTTGACTCGCAATCTACTATTGCCAC
TGATGAAGGAGGTTTCGGTACAGTCGAAATGGTAGAGATGAGCATCCAAG
AAGCTCCAGAACTAAGCACCAAGCCTTAAGCCATTCAATTTTCAGGACAA
GCATTCTTTCAGTGCCCCAAAATTTTCCCACTTGAAAACCAAAAAAGTTG
CCTTTGTATCTCTACCATTTAGTGTATGTAATCTTTGTATCCCTTTTGAA
AATTCTTGTTATTTATACATAAAAAAAAAAAAGTTGCTTTTAACTTTGTT
ATCGAATGTGTAAATATACAACCCCAAGTTTGTTATGCTATCTTGGTTCT
TTAA
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